RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 EAF2Q96CJ1 260 aaPredicted RBP13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 FLT4P35916 1363 aa13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 MAP2P11137 1827 aaKnown RBP13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 DDX46Q7L014 1031 aaKnown RBP13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 PGBD1Q96JS3 809 aa13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 ARGLU1Q9NWB6 273 aaPredicted RBP13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 TLR7Q9NYK1 1049 aaKnown RBP13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 TAF6LQ9Y6J9 622 aa13.56□□□□□ -0.24
PPFIA2-227ENST00000552948 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 CPLX1O14810 134 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 NEMFO60524 1076 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 PDIA4P13667 645 aaKnown RBP13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 KRT32Q14532 448 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 TDRD7Q8NHU6 1098 aaKnown RBP13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 DBF4Q9UBU7 674 aaPredicted RBP13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 CRB1P82279 1406 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 TAF3Q5VWG9 929 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 NOL10Q9BSC4 688 aaKnown RBP13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 A0A1B0GVL5 298 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 SERPINC1P01008 464 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 COL9A3Q14050 684 aaPredicted RBP13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 TEX35Q5T0J7 233 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 BEND3Q5T5X7 828 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 NCOA5Q9HCD5 579 aaKnown RBP13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 DNAI1Q9UI46 699 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 CPS1P31327 1500 aa13.55□□□□□ -0.24
PPFIA2-227ENST00000552948 CTIFO43310 598 aaKnown RBP13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 GABPB1Q06547 395 aaPredicted RBP13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 HSP90AA4PQ58FG1 418 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 TCHHQ07283 1943 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 POLA2Q14181 598 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 IFNKQ9P0W0 207 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 KNDC1Q76NI1 1749 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 LMOD1P29536 600 aaPredicted RBP13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 ARHGAP29Q52LW3 1261 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 ZNF589Q86UQ0 364 aaPredicted RBP13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 BICC1Q9H694 974 aaKnown RBP13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 ST7Q9NRC1 585 aa13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 DDX41Q9UJV9 622 aaKnown RBP13.54□□□□□ -0.24
PPFIA2-227ENST00000552948 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 CTAGE5O15320 804 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 ERO1AQ96HE7 468 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 SEC62Q99442 399 aaKnown RBP13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 OTUD7BQ6GQQ9 843 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 FBXO38Q6PIJ6 1188 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 TMCO3Q6UWJ1 677 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 ZSCAN16Q9H4T2 348 aaPredicted RBP13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 ZNF330Q9Y3S2 320 aaPredicted RBP13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 PIP4K2AP48426 406 aaPredicted RBP13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 ST3GAL1Q11201 340 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 BMS1Q14692 1282 aaKnown RBP13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 KMT5BQ4FZB7 885 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 TIGD1Q96MW7 591 aa13.53□□□□□ -0.24
PPFIA2-227ENST00000552948 ALKQ9UM73 1620 aa13.52□□□□□ -0.24
PPFIA2-227ENST00000552948 CAVIN2O95810 425 aa13.52□□□□□ -0.24
PPFIA2-227ENST00000552948 CFAP100Q494V2 611 aa13.52□□□□□ -0.24
PPFIA2-227ENST00000552948 PLA2G4DQ86XP0 818 aa13.52□□□□□ -0.24
PPFIA2-227ENST00000552948 ELP1O95163 1332 aa13.52□□□□□ -0.24
PPFIA2-227ENST00000552948 IFT172Q9UG01 1749 aa13.52□□□□□ -0.25
PPFIA2-227ENST00000552948 GRM8O00222 908 aa13.52□□□□□ -0.25
PPFIA2-227ENST00000552948 HOXC9P31274 260 aa13.52□□□□□ -0.25
PPFIA2-227ENST00000552948 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
PPFIA2-227ENST00000552948 USP28Q96RU2 1077 aa13.52□□□□□ -0.25
PPFIA2-227ENST00000552948 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
PPFIA2-227ENST00000552948 PTPDC1A2A3K4 754 aa13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 GSDMDP57764 484 aa13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 LRRC59Q96AG4 307 aaKnown RBP13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 HMG20BQ9P0W2 317 aa13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 ABCA9Q8IUA7 1624 aa13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 EIF4A1P60842 406 aaKnown RBP13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 PROSER3Q2NL68 480 aa13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 MYD88Q99836 296 aa13.51□□□□□ -0.25
PPFIA2-227ENST00000552948 KIF2AO00139 706 aaPredicted RBP13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 PTPN21Q16825 1174 aa13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 PLEKHO1Q53GL0 409 aaPredicted RBP13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 ZSWIM4Q9H7M6 989 aa13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 SLC3A2P08195 630 aaKnown RBP13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 TOB2Q14106 344 aaPredicted RBP13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 KSR2Q6VAB6 950 aa13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 CHGBP05060 677 aa13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 HAND2P61296 217 aa13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 CALCOCO1Q9P1Z2 691 aa13.5□□□□□ -0.25
PPFIA2-227ENST00000552948 ARHGEF10O15013 1369 aa13.49□□□□□ -0.25
PPFIA2-227ENST00000552948 GOLIM4O00461 696 aa13.49□□□□□ -0.25
PPFIA2-227ENST00000552948 TERF2Q15554 542 aa13.49□□□□□ -0.25
PPFIA2-227ENST00000552948 U3KPZ7 1027 aaPredicted RBP13.49□□□□□ -0.25
PPFIA2-227ENST00000552948 SBNO1A3KN83 1393 aa13.49□□□□□ -0.25
PPFIA2-227ENST00000552948 MRPS27Q92552 414 aaKnown RBP13.49□□□□□ -0.25
PPFIA2-227ENST00000552948 XPO4Q9C0E2 1151 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms