RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 BICDL1Q6ZP65 573 aa5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 NPM2Q86SE8 214 aaKnown RBP5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 ZNF34Q8IZ26 560 aa5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 SLC17A8Q8NDX2 589 aa5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 NYXQ9GZU5 481 aa5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 MAP3K15Q6ZN16 1313 aa5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 WDR33Q9C0J8 1336 aaKnown RBP5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 RASSF10A6NK89 507 aa5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 ITGBL1O95965 494 aaPredicted RBP5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 PDIA6Q15084 440 aa5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 RALBP1Q15311 655 aa5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 HLFQ16534 295 aa5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 HABP4Q5JVS0 413 aaKnown RBP5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 NBPF5PQ86XG9 351 aaPredicted RBP5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 GPC2Q8N158 579 aa5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 ZNF622Q969S3 477 aaKnown RBP eCLIP5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 CRAMP1Q96RY5 1269 aa5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 TMEM106CQ9BVX2 250 aa5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 RTFDC1Q9BY42 306 aaPredicted RBP5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 TAF1DQ9H5J8 278 aaPredicted RBP5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 NIP7Q9Y221 180 aaKnown RBP eCLIP5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 ABCC12Q96J65 1359 aa5.87□□□□□ -1.47
TMEM106C-220ENST00000552561 CACNA1SQ13698 1873 aa5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 ANKRD36CQ5JPF3 1778 aa5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 UBN2Q6ZU65 1347 aa5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 CDHR2Q9BYE9 1310 aa5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 DDNO94850 711 aaPredicted RBP5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 NTSR2O95665 410 aa5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 HOXB7P09629 217 aa5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 DCTN1Q14203 1278 aa5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 PARP10Q53GL7 1025 aa5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 PNMA8AQ86V59 439 aaPredicted RBP5.86□□□□□ -1.47
TMEM106C-220ENST00000552561 LRRC37AA6NMS7 1700 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 LTBP1Q14766 1721 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 COL4A5P29400 1685 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 ZNF609O15014 1411 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 CHL1O00533 1208 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 NEFMP07197 916 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 IARSP41252 1262 aaKnown RBP5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 TRIM28Q13263 835 aaKnown RBP5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 EAPPQ56P03 285 aaPredicted RBP5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 SLAIN1Q8ND83 568 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 CAPNS2Q96L46 248 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 GPR101Q96P66 508 aaPredicted RBP5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 PGAP2Q9UHJ9 254 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 TRPM7Q96QT4 1865 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 CEP290O15078 2479 aa5.85□□□□□ -1.47
TMEM106C-220ENST00000552561 PITPNM2Q9BZ72 1349 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 ZNF541Q9H0D2 1346 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 TRIOBPQ9H2D6 2365 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 ST18O60284 1047 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 PLCG2P16885 1265 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 MAP2K2P36507 400 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 PIP4K2AP48426 406 aaPredicted RBP5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 IRX5P78411 483 aaPredicted RBP5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 LMOD3Q0VAK6 560 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 HSP90AB3PQ58FF7 597 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 SUSD4Q5VX71 490 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 TTLL7Q6ZT98 887 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 TMC4Q7Z404 712 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 SYNE4Q8N205 404 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 CCDC24Q8N4L8 307 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 HACL1Q9UJ83 578 aa5.84□□□□□ -1.47
TMEM106C-220ENST00000552561 BBOX1O75936 387 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 ZNF853P0CG23 659 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 PYGBP11216 843 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 EPHX2P34913 555 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 TMPOP42166 694 aaKnown RBP5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 SCNN1DP51172 638 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 DCAF8Q5TAQ9 597 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 KIF6Q6ZMV9 814 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 USP50Q70EL3 339 aaPredicted RBP5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 PPP1R42Q7Z4L9 355 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 ZC3H15Q8WU90 426 aaKnown RBP5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 HHIPL1Q96JK4 782 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 DDX21Q9NR30 783 aaKnown RBP eCLIP5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 ZNF277Q9NRM2 450 aaPredicted RBP5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 TSKSQ9UJT2 592 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 ZNF330Q9Y3S2 320 aaPredicted RBP5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 ATP6V0A2Q9Y487 856 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 DUOX1Q9NRD9 1551 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 LAMB2P55268 1798 aa5.83□□□□□ -1.48
TMEM106C-220ENST00000552561 MYBBP1AQ9BQG0 1328 aaKnown RBP5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 MAPK8IP3Q9UPT6 1336 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 ZNF316A6NFI3 1004 aaPredicted RBP5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 BRPF1P55201 1214 aaPredicted RBP5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 RIPK4P57078 832 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 KIAA2012Q0VF49 1180 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 TCIRG1Q13488 830 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 SF3B3Q15393 1217 aaKnown RBP5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 NLRP10Q86W26 655 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 SP8Q8IXZ3 490 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 JDP2Q8WYK2 163 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 RBM17Q96I25 401 aaKnown RBP5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 NLRP3Q96P20 1036 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 ISCA1Q9BUE6 129 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 MIS18AQ9NYP9 233 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 AKAP11Q9UKA4 1901 aa5.82□□□□□ -1.48
TMEM106C-220ENST00000552561 A0A0C4DFX4 3053 aa5.81□□□□□ -1.48
TMEM106C-220ENST00000552561 ABCC4O15439 1325 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms