RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 NTSR2O95665 410 aa20.33■□□□□ 0.85
CACNB3-220ENST00000551716 TTLL7Q6ZT98 887 aa20.33■□□□□ 0.85
CACNB3-220ENST00000551716 DPF2Q92785 391 aa20.33■□□□□ 0.85
CACNB3-220ENST00000551716 FAM155AB1AL88 458 aaPredicted RBP20.32■□□□□ 0.84
CACNB3-220ENST00000551716 KIF23Q02241 960 aaPredicted RBP20.32■□□□□ 0.84
CACNB3-220ENST00000551716 GIGYF2Q6Y7W6 1299 aaKnown RBP20.32■□□□□ 0.84
CACNB3-220ENST00000551716 TRPM4Q8TD43 1214 aa20.32■□□□□ 0.84
CACNB3-220ENST00000551716 ZBTB3Q9H5J0 574 aa20.32■□□□□ 0.84
CACNB3-220ENST00000551716 GBA2Q9HCG7 927 aaPredicted RBP20.32■□□□□ 0.84
CACNB3-220ENST00000551716 RNF186Q9NXI6 227 aa20.32■□□□□ 0.84
CACNB3-220ENST00000551716 TRPA1O75762 1119 aa20.31■□□□□ 0.84
CACNB3-220ENST00000551716 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
CACNB3-220ENST00000551716 ZNF157P51786 506 aaPredicted RBP20.31■□□□□ 0.84
CACNB3-220ENST00000551716 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
CACNB3-220ENST00000551716 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
CACNB3-220ENST00000551716 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
CACNB3-220ENST00000551716 C3orf67Q6ZVT6 689 aa20.3■□□□□ 0.84
CACNB3-220ENST00000551716 KRT26Q7Z3Y9 468 aa20.3■□□□□ 0.84
CACNB3-220ENST00000551716 CTU1Q7Z7A3 348 aaKnown RBP20.3■□□□□ 0.84
CACNB3-220ENST00000551716 MICALL2Q8IY33 904 aa20.3■□□□□ 0.84
CACNB3-220ENST00000551716 MIS18AQ9NYP9 233 aa20.3■□□□□ 0.84
CACNB3-220ENST00000551716 MYL6BP14649 208 aa20.29■□□□□ 0.84
CACNB3-220ENST00000551716 PKN2Q16513 984 aaKnown RBP20.29■□□□□ 0.84
CACNB3-220ENST00000551716 TMC4Q7Z404 712 aa20.29■□□□□ 0.84
CACNB3-220ENST00000551716 DCPSQ96C86 337 aaKnown RBP20.29■□□□□ 0.84
CACNB3-220ENST00000551716 ABCC4O15439 1325 aa20.28■□□□□ 0.84
CACNB3-220ENST00000551716 ERBB4Q15303 1308 aa20.27■□□□□ 0.84
CACNB3-220ENST00000551716 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
CACNB3-220ENST00000551716 DDX46Q7L014 1031 aaKnown RBP20.27■□□□□ 0.84
CACNB3-220ENST00000551716 SLC51AQ86UW1 340 aa20.27■□□□□ 0.84
CACNB3-220ENST00000551716 GCC1Q96CN9 775 aa20.27■□□□□ 0.84
CACNB3-220ENST00000551716 NEFMP07197 916 aa20.26■□□□□ 0.83
CACNB3-220ENST00000551716 RPS12P25398 132 aaKnown RBP20.26■□□□□ 0.83
CACNB3-220ENST00000551716 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
CACNB3-220ENST00000551716 CSRNP1Q96S65 589 aa20.26■□□□□ 0.83
CACNB3-220ENST00000551716 PCGF6Q9BYE7 350 aa20.26■□□□□ 0.83
CACNB3-220ENST00000551716 SAMD7Q7Z3H4 446 aa20.25■□□□□ 0.83
CACNB3-220ENST00000551716 YDJCA8MPS7 323 aa20.24■□□□□ 0.83
CACNB3-220ENST00000551716 GRAPQ13588 217 aa20.24■□□□□ 0.83
CACNB3-220ENST00000551716 GRAPLQ8TC17 118 aaPredicted RBP20.24■□□□□ 0.83
CACNB3-220ENST00000551716 SLC10A3P09131 477 aa20.23■□□□□ 0.83
CACNB3-220ENST00000551716 WASHC4Q2M389 1173 aa20.23■□□□□ 0.83
CACNB3-220ENST00000551716 TBC1D10BQ4KMP7 808 aaPredicted RBP20.23■□□□□ 0.83
CACNB3-220ENST00000551716 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
CACNB3-220ENST00000551716 SULF1Q8IWU6 871 aa20.23■□□□□ 0.83
CACNB3-220ENST00000551716 HPS5Q9UPZ3 1129 aa20.23■□□□□ 0.83
CACNB3-220ENST00000551716 ZBTB12Q9Y330 459 aaPredicted RBP20.23■□□□□ 0.83
CACNB3-220ENST00000551716 NUP98P52948 1817 aa20.23■□□□□ 0.83
CACNB3-220ENST00000551716 SHTN1A0MZ66 631 aa20.22■□□□□ 0.83
CACNB3-220ENST00000551716 PSMD14O00487 310 aa20.21■□□□□ 0.83
CACNB3-220ENST00000551716 DLK2Q6UY11 383 aa20.21■□□□□ 0.83
CACNB3-220ENST00000551716 HDAC9Q9UKV0 1011 aa20.21■□□□□ 0.83
CACNB3-220ENST00000551716 FKBP1BP68106 108 aa20.2■□□□□ 0.82
CACNB3-220ENST00000551716 RBM26Q5T8P6 1007 aaKnown RBP20.2■□□□□ 0.82
CACNB3-220ENST00000551716 ADM5C9JUS6 153 aa20.19■□□□□ 0.82
CACNB3-220ENST00000551716 HCLS1P14317 486 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-220ENST00000551716 EYA3Q99504 573 aa20.18■□□□□ 0.82
CACNB3-220ENST00000551716 TRMT112Q9UI30 125 aaKnown RBP20.18■□□□□ 0.82
CACNB3-220ENST00000551716 NSFL1CQ9UNZ2 370 aaKnown RBP20.18■□□□□ 0.82
CACNB3-220ENST00000551716 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
CACNB3-220ENST00000551716 NLRP10Q86W26 655 aa20.17■□□□□ 0.82
CACNB3-220ENST00000551716 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
CACNB3-220ENST00000551716 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
CACNB3-220ENST00000551716 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
CACNB3-220ENST00000551716 DBNDD1Q9H9R9 158 aa20.16■□□□□ 0.82
CACNB3-220ENST00000551716 C6orf229H3BNL8 230 aa20.15■□□□□ 0.82
CACNB3-220ENST00000551716 EGFRP00533 1210 aa20.15■□□□□ 0.82
CACNB3-220ENST00000551716 CDCA5Q96FF9 252 aa20.15■□□□□ 0.82
CACNB3-220ENST00000551716 RIMBP2O15034 1052 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 ECE2O60344 883 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 PPP2R1AP30153 589 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 TCIRG1Q13488 830 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 PDIA6Q15084 440 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 RASAL3Q86YV0 1011 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 NECTIN2Q92692 538 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 GGA3Q9NZ52 723 aa20.14■□□□□ 0.81
CACNB3-220ENST00000551716 VIL1P09327 827 aaKnown RBP20.13■□□□□ 0.81
CACNB3-220ENST00000551716 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
CACNB3-220ENST00000551716 ZNF296Q8WUU4 475 aaPredicted RBP20.13■□□□□ 0.81
CACNB3-220ENST00000551716 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
CACNB3-220ENST00000551716 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
CACNB3-220ENST00000551716 AKAP11Q9UKA4 1901 aa20.13■□□□□ 0.81
CACNB3-220ENST00000551716 FBXO46Q6PJ61 603 aaPredicted RBP20.12■□□□□ 0.81
CACNB3-220ENST00000551716 ZC3H12CQ9C0D7 883 aaKnown RBP20.12■□□□□ 0.81
CACNB3-220ENST00000551716 POLLQ9UGP5 575 aa20.12■□□□□ 0.81
CACNB3-220ENST00000551716 G3V3G9 751 aa20.11■□□□□ 0.81
CACNB3-220ENST00000551716 SF3B3Q15393 1217 aaKnown RBP20.11■□□□□ 0.81
CACNB3-220ENST00000551716 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
CACNB3-220ENST00000551716 DOK7Q18PE1 504 aa20.11■□□□□ 0.81
CACNB3-220ENST00000551716 DCAF8Q5TAQ9 597 aa20.11■□□□□ 0.81
CACNB3-220ENST00000551716 COPS6Q7L5N1 327 aa20.11■□□□□ 0.81
CACNB3-220ENST00000551716 TBC1D8O95759 1140 aa20.1■□□□□ 0.81
CACNB3-220ENST00000551716 TM4SF4P48230 202 aa20.1■□□□□ 0.81
CACNB3-220ENST00000551716 SCARF1Q14162 830 aa20.1■□□□□ 0.81
CACNB3-220ENST00000551716 AGBL3Q8NEM8 1001 aa20.1■□□□□ 0.81
CACNB3-220ENST00000551716 KCNQ5Q9NR82 932 aa20.1■□□□□ 0.81
CACNB3-220ENST00000551716 BABAM1Q9NWV8 329 aa20.1■□□□□ 0.81
CACNB3-220ENST00000551716 TSPYL4Q9UJ04 414 aa20.1■□□□□ 0.81
CACNB3-220ENST00000551716 RTL9Q8NET4 1388 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms