RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	ANKRD36C	Q5JPF3	1778 aa		14.03	□□□□□ -0.16
PFKM-223	ENST00000551485	BBOX1	O75936	387 aa		14.02	□□□□□ -0.17
PFKM-223	ENST00000551485	TNIP1	Q15025	636 aa		14.02	□□□□□ -0.17
PFKM-223	ENST00000551485	PDIA6	Q15084	440 aa		14.02	□□□□□ -0.17
PFKM-223	ENST00000551485	SP8	Q8IXZ3	490 aa		14.02	□□□□□ -0.17
PFKM-223	ENST00000551485	MPND	Q8N594	471 aa		14.02	□□□□□ -0.17
PFKM-223	ENST00000551485	TRPM4	Q8TD43	1214 aa		14.02	□□□□□ -0.17
PFKM-223	ENST00000551485	ZC3H15	Q8WU90	426 aa	Known RBP	14.02	□□□□□ -0.17
PFKM-223	ENST00000551485	RAD17	O75943	681 aa		14.01	□□□□□ -0.17
PFKM-223	ENST00000551485	HIRA	P54198	1017 aa	Predicted RBP	14.01	□□□□□ -0.17
PFKM-223	ENST00000551485	PROSER3	Q2NL68	480 aa		14.01	□□□□□ -0.17
PFKM-223	ENST00000551485	BCL2L13	Q9BXK5	485 aa		14.01	□□□□□ -0.17
PFKM-223	ENST00000551485	MCOLN1	Q9GZU1	580 aa		14.01	□□□□□ -0.17
PFKM-223	ENST00000551485	ZNF408	Q9H9D4	720 aa		14.01	□□□□□ -0.17
PFKM-223	ENST00000551485	TSPYL4	Q9UJ04	414 aa		14.01	□□□□□ -0.17
PFKM-223	ENST00000551485	MAPK8IP3	Q9UPT6	1336 aa		14	□□□□□ -0.17
PFKM-223	ENST00000551485	ANXA1	P04083	346 aa		14	□□□□□ -0.17
PFKM-223	ENST00000551485	HCLS1	P14317	486 aa	Predicted RBP	14	□□□□□ -0.17
PFKM-223	ENST00000551485	EIF2S2	P20042	333 aa	Known RBP	14	□□□□□ -0.17
PFKM-223	ENST00000551485	GRAP	Q13588	217 aa		14	□□□□□ -0.17
PFKM-223	ENST00000551485	HSP90AB3P	Q58FF7	597 aa		14	□□□□□ -0.17
PFKM-223	ENST00000551485	CDC37L1	Q7L3B6	337 aa		14	□□□□□ -0.17
PFKM-223	ENST00000551485	GRAPL	Q8TC17	118 aa	Predicted RBP	14	□□□□□ -0.17
PFKM-223	ENST00000551485	DUOX1	Q9NRD9	1551 aa		14	□□□□□ -0.17
PFKM-223	ENST00000551485	YDJC	A8MPS7	323 aa		13.99	□□□□□ -0.17
PFKM-223	ENST00000551485	DDX46	Q7L014	1031 aa	Known RBP	13.99	□□□□□ -0.17
PFKM-223	ENST00000551485	NLRP10	Q86W26	655 aa		13.99	□□□□□ -0.17
PFKM-223	ENST00000551485	CNOT7	Q9UIV1	285 aa	Known RBP	13.99	□□□□□ -0.17
PFKM-223	ENST00000551485	LRRC37A	A6NMS7	1700 aa		13.98	□□□□□ -0.17
PFKM-223	ENST00000551485	TAF1	P21675	1872 aa		13.98	□□□□□ -0.17
PFKM-223	ENST00000551485	SHTN1	A0MZ66	631 aa		13.98	□□□□□ -0.17
PFKM-223	ENST00000551485		H7C1D1	291 aa		13.98	□□□□□ -0.17
PFKM-223	ENST00000551485	NOG	Q13253	232 aa		13.98	□□□□□ -0.17
PFKM-223	ENST00000551485	MICALL2	Q8IY33	904 aa		13.98	□□□□□ -0.17
PFKM-223	ENST00000551485	PNN	Q9H307	717 aa	Known RBP	13.98	□□□□□ -0.17
PFKM-223	ENST00000551485	PDE4DIP	Q5VU43	2346 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	SH3TC1	Q8TE82	1336 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	DGKZ	Q13574	1117 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	COPS6	Q7L5N1	327 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	TMC4	Q7Z404	712 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	XAGE3	Q8WTP9	111 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	CFAP44	Q96MT7	982 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	ZIC5	Q96T25	663 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	BABAM1	Q9NWV8	329 aa		13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	TRMT112	Q9UI30	125 aa	Known RBP	13.97	□□□□□ -0.17
PFKM-223	ENST00000551485	HUNK	P57058	714 aa		13.96	□□□□□ -0.17
PFKM-223	ENST00000551485	AIMP1	Q12904	312 aa	Known RBP	13.96	□□□□□ -0.17
PFKM-223	ENST00000551485	TCIRG1	Q13488	830 aa		13.96	□□□□□ -0.17
PFKM-223	ENST00000551485	USP48	Q86UV5	1035 aa		13.96	□□□□□ -0.17
PFKM-223	ENST00000551485	DPF2	Q92785	391 aa		13.96	□□□□□ -0.17
PFKM-223	ENST00000551485	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.96	□□□□□ -0.17
PFKM-223	ENST00000551485	PSMD14	O00487	310 aa		13.95	□□□□□ -0.18
PFKM-223	ENST00000551485	SAMD7	Q7Z3H4	446 aa		13.95	□□□□□ -0.18
PFKM-223	ENST00000551485	NECTIN2	Q92692	538 aa		13.95	□□□□□ -0.18
PFKM-223	ENST00000551485	DDX60	Q8IY21	1712 aa	Known RBP	13.95	□□□□□ -0.18
PFKM-223	ENST00000551485	POLR2A	P24928	1970 aa	Known RBP	13.94	□□□□□ -0.18
PFKM-223	ENST00000551485	TNRC18	O15417	2968 aa	Predicted RBP	13.94	□□□□□ -0.18
PFKM-223	ENST00000551485	RIPK4	P57078	832 aa		13.94	□□□□□ -0.18
PFKM-223	ENST00000551485	WASHC4	Q2M389	1173 aa		13.94	□□□□□ -0.18
PFKM-223	ENST00000551485	DLK2	Q6UY11	383 aa		13.94	□□□□□ -0.18
PFKM-223	ENST00000551485	KRT26	Q7Z3Y9	468 aa		13.94	□□□□□ -0.18
PFKM-223	ENST00000551485	FAM155A	B1AL88	458 aa	Predicted RBP	13.93	□□□□□ -0.18
PFKM-223	ENST00000551485	EGFR	P00533	1210 aa		13.93	□□□□□ -0.18
PFKM-223	ENST00000551485	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.93	□□□□□ -0.18
PFKM-223	ENST00000551485	RGMB	Q6NW40	437 aa		13.93	□□□□□ -0.18
PFKM-223	ENST00000551485	DBNDD1	Q9H9R9	158 aa		13.93	□□□□□ -0.18
PFKM-223	ENST00000551485	GBA2	Q9HCG7	927 aa	Predicted RBP	13.93	□□□□□ -0.18
PFKM-223	ENST00000551485	ADM5	C9JUS6	153 aa		13.92	□□□□□ -0.18
PFKM-223	ENST00000551485	RPS12	P25398	132 aa	Known RBP	13.92	□□□□□ -0.18
PFKM-223	ENST00000551485	LMOD3	Q0VAK6	560 aa		13.92	□□□□□ -0.18
PFKM-223	ENST00000551485	C2orf69	Q8N8R5	385 aa		13.92	□□□□□ -0.18
PFKM-223	ENST00000551485	CELF1	Q92879	486 aa	Known RBP	13.92	□□□□□ -0.18
PFKM-223	ENST00000551485	ZNF428	Q96B54	188 aa		13.92	□□□□□ -0.18
PFKM-223	ENST00000551485	SAGE1	Q9NXZ1	904 aa		13.92	□□□□□ -0.18
PFKM-223	ENST00000551485	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.92	□□□□□ -0.18
PFKM-223	ENST00000551485	COL4A1	P02462	1669 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	C6orf229	H3BNL8	230 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	RIMBP2	O15034	1052 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	ECE2	O60344	883 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	TMPO	P42166	694 aa	Known RBP	13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	GPSM2	P81274	684 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	SF3B3	Q15393	1217 aa	Known RBP	13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	PLBD2	Q8NHP8	589 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	CCDC102A	Q96A19	550 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	DCPS	Q96C86	337 aa	Known RBP	13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	POLL	Q9UGP5	575 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	RTL9	Q8NET4	1388 aa		13.91	□□□□□ -0.18
PFKM-223	ENST00000551485	ZNF157	P51786	506 aa	Predicted RBP	13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	KIF23	Q02241	960 aa	Predicted RBP	13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	KRT24	Q2M2I5	525 aa		13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	KIF4B	Q2VIQ3	1234 aa		13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	RBM26	Q5T8P6	1007 aa	Known RBP	13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	FAM89A	Q96GI7	184 aa		13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	EYA3	Q99504	573 aa		13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	ISCA1	Q9BUE6	129 aa		13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	CHPF2	Q9P2E5	772 aa		13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	SCN9A	Q15858	1988 aa		13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	AKAP11	Q9UKA4	1901 aa		13.9	□□□□□ -0.18
PFKM-223	ENST00000551485	CHL1	O00533	1208 aa		13.89	□□□□□ -0.19
PFKM-223	ENST00000551485	DOK7	Q18PE1	504 aa		13.89	□□□□□ -0.19

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