RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 CCER1Q8TC90 406 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-215ENST00000551391 IGFLR1Q9H665 355 aa6.42□□□□□ -1.38
SCAF11-215ENST00000551391 NID1P14543 1247 aa6.41□□□□□ -1.38
SCAF11-215ENST00000551391 RAC1P63000 192 aa6.41□□□□□ -1.38
SCAF11-215ENST00000551391 RTN1Q16799 776 aa6.41□□□□□ -1.38
SCAF11-215ENST00000551391 ALDH16A1Q8IZ83 802 aa6.41□□□□□ -1.38
SCAF11-215ENST00000551391 BHMTQ93088 406 aa6.41□□□□□ -1.38
SCAF11-215ENST00000551391 HSH2DQ96JZ2 352 aa6.41□□□□□ -1.38
SCAF11-215ENST00000551391 UBE2OQ9C0C9 1292 aaKnown RBP6.41□□□□□ -1.38
SCAF11-215ENST00000551391 PHACTR1Q9C0D0 580 aa6.41□□□□□ -1.38
SCAF11-215ENST00000551391 ZFP64Q9NPA5 681 aa6.41□□□□□ -1.38
SCAF11-215ENST00000551391 COL9A3Q14050 684 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-215ENST00000551391 HIF1AQ16665 826 aa6.4□□□□□ -1.38
SCAF11-215ENST00000551391 PRSS36Q5K4E3 855 aa6.4□□□□□ -1.38
SCAF11-215ENST00000551391 C16orf46Q6P387 395 aa6.4□□□□□ -1.38
SCAF11-215ENST00000551391 CAPN12Q6ZSI9 719 aa6.4□□□□□ -1.38
SCAF11-215ENST00000551391 SUSD3Q96L08 255 aa6.4□□□□□ -1.38
SCAF11-215ENST00000551391 QTRT2Q9H974 415 aaKnown RBP6.4□□□□□ -1.38
SCAF11-215ENST00000551391 EGFL7Q9UHF1 273 aa6.4□□□□□ -1.38
SCAF11-215ENST00000551391 SCNN1AP37088 669 aa6.39□□□□□ -1.39
SCAF11-215ENST00000551391 KCNQ4P56696 695 aa6.39□□□□□ -1.39
SCAF11-215ENST00000551391 NRG1Q02297 640 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-215ENST00000551391 COX20Q5RI15 118 aa6.39□□□□□ -1.39
SCAF11-215ENST00000551391 ARTNQ5T4W7 220 aa6.39□□□□□ -1.39
SCAF11-215ENST00000551391 AEBP1Q8IUX7 1158 aa6.39□□□□□ -1.39
SCAF11-215ENST00000551391 MKNK1Q9BUB5 465 aa6.39□□□□□ -1.39
SCAF11-215ENST00000551391 JPH1Q9HDC5 661 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-215ENST00000551391 SEPT3Q9UH03 358 aa6.39□□□□□ -1.39
SCAF11-215ENST00000551391 ELNP15502 786 aa6.38□□□□□ -1.39
SCAF11-215ENST00000551391 TYRO3Q06418 890 aa6.38□□□□□ -1.39
SCAF11-215ENST00000551391 SF3B2Q13435 895 aaKnown RBP6.38□□□□□ -1.39
SCAF11-215ENST00000551391 C11orf91Q3C1V1 193 aa6.38□□□□□ -1.39
SCAF11-215ENST00000551391 C20orf204Q6ZNR8 217 aa6.38□□□□□ -1.39
SCAF11-215ENST00000551391 ZNF280CQ8ND82 737 aa6.38□□□□□ -1.39
SCAF11-215ENST00000551391 HELQQ8TDG4 1101 aa6.38□□□□□ -1.39
SCAF11-215ENST00000551391 GTF3C2Q8WUA4 911 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-215ENST00000551391 PNMA5Q96PV4 448 aa6.38□□□□□ -1.39
SCAF11-215ENST00000551391 EFCC1Q9HA90 598 aa6.38□□□□□ -1.39
SCAF11-215ENST00000551391 A0A0A0MRY4 1105 aa6.37□□□□□ -1.39
SCAF11-215ENST00000551391 NPR3P17342 541 aa6.37□□□□□ -1.39
SCAF11-215ENST00000551391 ADGRE1Q14246 886 aa6.37□□□□□ -1.39
SCAF11-215ENST00000551391 NAA30Q147X3 362 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-215ENST00000551391 FOXD4L6Q3SYB3 417 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-215ENST00000551391 FOXD4L3Q6VB84 417 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-215ENST00000551391 NUDT8Q8WV74 236 aa6.37□□□□□ -1.39
SCAF11-215ENST00000551391 SAP130Q9H0E3 1048 aa6.37□□□□□ -1.39
SCAF11-215ENST00000551391 USP21Q9UK80 565 aa6.37□□□□□ -1.39
SCAF11-215ENST00000551391 LRFN2Q9ULH4 789 aa6.37□□□□□ -1.39
SCAF11-215ENST00000551391 ZBTB7CA1YPR0 619 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 H2AFB1P0C5Y9 115 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 H2AFB2P0C5Z0 115 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 FKBP4Q02790 459 aaKnown RBP eCLIP6.36□□□□□ -1.39
SCAF11-215ENST00000551391 MBTPS1Q14703 1052 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 IER5Q5VY09 327 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 TXNRD3Q86VQ6 643 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 NGLY1Q96IV0 654 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 STIM2Q9P246 746 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 SLC6A14Q9UN76 642 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
SCAF11-215ENST00000551391 TNFRSF10BO14763 440 aa6.35□□□□□ -1.39
SCAF11-215ENST00000551391 ICMTO60725 284 aa6.35□□□□□ -1.39
SCAF11-215ENST00000551391 RGS9O75916 674 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-215ENST00000551391 SELPP16109 830 aa6.35□□□□□ -1.39
SCAF11-215ENST00000551391 BRD2P25440 801 aaKnown RBP6.35□□□□□ -1.39
SCAF11-215ENST00000551391 SERPINB4P48594 390 aa6.35□□□□□ -1.39
SCAF11-215ENST00000551391 PSAPL1Q6NUJ1 521 aa6.35□□□□□ -1.39
SCAF11-215ENST00000551391 BTLAQ7Z6A9 289 aa6.35□□□□□ -1.39
SCAF11-215ENST00000551391 TP53INP1Q96A56 240 aa6.35□□□□□ -1.39
SCAF11-215ENST00000551391 LENG1Q96BZ8 264 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-215ENST00000551391 SOWAHDA6NJG2 315 aa6.34□□□□□ -1.39
SCAF11-215ENST00000551391 TGFBR3LH3BV60 316 aa6.34□□□□□ -1.39
SCAF11-215ENST00000551391 DGKZQ13574 1117 aa6.34□□□□□ -1.39
SCAF11-215ENST00000551391 PCSK7Q16549 785 aa6.34□□□□□ -1.39
SCAF11-215ENST00000551391 IFT43Q96FT9 208 aa6.34□□□□□ -1.39
SCAF11-215ENST00000551391 DNAJB12Q9NXW2 375 aaKnown RBP6.34□□□□□ -1.39
SCAF11-215ENST00000551391 FAM13AO94988 1023 aa6.33□□□□□ -1.4
SCAF11-215ENST00000551391 ABL1P00519 1130 aa6.33□□□□□ -1.4
SCAF11-215ENST00000551391 CCINQ13939 588 aa6.33□□□□□ -1.4
SCAF11-215ENST00000551391 ECM1Q16610 540 aa6.33□□□□□ -1.4
SCAF11-215ENST00000551391 SHISA2Q6UWI4 295 aa6.33□□□□□ -1.4
SCAF11-215ENST00000551391 DMRTC2Q8IXT2 367 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-215ENST00000551391 ABTB2Q8N961 1025 aa6.33□□□□□ -1.4
SCAF11-215ENST00000551391 KLK14Q9P0G3 267 aa6.33□□□□□ -1.4
SCAF11-215ENST00000551391 DMGDHQ9UI17 866 aaKnown RBP6.33□□□□□ -1.4
SCAF11-215ENST00000551391 BCS1LQ9Y276 419 aa6.33□□□□□ -1.4
SCAF11-215ENST00000551391 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-215ENST00000551391 AFF1P51825 1210 aaKnown RBP6.32□□□□□ -1.4
SCAF11-215ENST00000551391 TRIM26Q12899 539 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-215ENST00000551391 LRP8Q14114 963 aa6.32□□□□□ -1.4
SCAF11-215ENST00000551391 ALKBH2Q6NS38 261 aa6.32□□□□□ -1.4
SCAF11-215ENST00000551391 FMR1NBQ8N0W7 255 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-215ENST00000551391 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
SCAF11-215ENST00000551391 GSX2Q9BZM3 304 aa6.32□□□□□ -1.4
SCAF11-215ENST00000551391 EPB42P16452 691 aa6.31□□□□□ -1.4
SCAF11-215ENST00000551391 NFKB1P19838 968 aa6.31□□□□□ -1.4
SCAF11-215ENST00000551391 ZNF211Q13398 564 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-215ENST00000551391 ETFBKMTQ8IXQ9 262 aa6.31□□□□□ -1.4
SCAF11-215ENST00000551391 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-215ENST00000551391 H3BRB1 525 aa6.3□□□□□ -1.4
SCAF11-215ENST00000551391 MICAL2O94851 1124 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms