RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 TWISTNBQ3B726 338 aaPredicted RBP9.39□□□□□ -0.91
SMARCD1-210ENST00000551352 GIGYF2Q6Y7W6 1299 aaKnown RBP9.39□□□□□ -0.91
SMARCD1-210ENST00000551352 NPM2Q86SE8 214 aaKnown RBP9.39□□□□□ -0.91
SMARCD1-210ENST00000551352 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
SMARCD1-210ENST00000551352 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
SMARCD1-210ENST00000551352 PSMD1Q99460 953 aa9.39□□□□□ -0.91
SMARCD1-210ENST00000551352 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
SMARCD1-210ENST00000551352 TNNQ9UQP3 1299 aa9.39□□□□□ -0.91
SMARCD1-210ENST00000551352 RLBP1P12271 317 aa9.38□□□□□ -0.91
SMARCD1-210ENST00000551352 SCNN1DP51172 638 aa9.38□□□□□ -0.91
SMARCD1-210ENST00000551352 LDHDQ86WU2 507 aa9.38□□□□□ -0.91
SMARCD1-210ENST00000551352 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
SMARCD1-210ENST00000551352 MYH3P11055 1940 aa9.38□□□□□ -0.91
SMARCD1-210ENST00000551352 ERBB4Q15303 1308 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 FOXN1O15353 648 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 IPO8O15397 1037 aaKnown RBP9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 TRIM27P14373 513 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 EPHX2P34913 555 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 AAMPQ13685 434 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 MAP1SQ66K74 1059 aaPredicted RBP9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 ATF7IPQ6VMQ6 1270 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 DZIP1LQ8IYY4 767 aaKnown RBP9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 RTKN2Q8IZC4 609 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 TSPYL4Q9UJ04 414 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 HACL1Q9UJ83 578 aa9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 NOB1Q9ULX3 412 aaKnown RBP9.37□□□□□ -0.91
SMARCD1-210ENST00000551352 ABCC4O15439 1325 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 ELL2O00472 640 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 TCERG1O14776 1098 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 CAPN15O75808 1086 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 EIF2S2P20042 333 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 ALDH1B1P30837 517 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 EPS15P42566 896 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 VEGFBP49765 207 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 MVPQ14764 893 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 EAPPQ56P03 285 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 SLC10A5Q5PT55 438 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 KIF6Q6ZMV9 814 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 FTSJ3Q8IY81 847 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 CLUAP1Q96AJ1 413 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 CRAMP1Q96RY5 1269 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 NYXQ9GZU5 481 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 BABAM1Q9NWV8 329 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 A0A1B0GUL6 1792 aa9.36□□□□□ -0.91
SMARCD1-210ENST00000551352 CACNA1FO60840 1977 aa9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 IQCA1LA6NCM1 817 aa9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 CENPQQ7L2Z9 268 aaPredicted RBP9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 NLRP10Q86W26 655 aa9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 TNS4Q8IZW8 715 aa9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 GPC2Q8N158 579 aa9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 XAGE3Q8WTP9 111 aa9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
SMARCD1-210ENST00000551352 CASP8AP2Q9UKL3 1982 aa9.34□□□□□ -0.91
SMARCD1-210ENST00000551352 SHTN1A0MZ66 631 aa9.34□□□□□ -0.91
SMARCD1-210ENST00000551352 HCLS1P14317 486 aaPredicted RBP9.34□□□□□ -0.91
SMARCD1-210ENST00000551352 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
SMARCD1-210ENST00000551352 AOC3Q16853 763 aa9.34□□□□□ -0.91
SMARCD1-210ENST00000551352 COPS6Q7L5N1 327 aa9.34□□□□□ -0.91
SMARCD1-210ENST00000551352 RPGRQ92834 1020 aaKnown RBP9.34□□□□□ -0.91
SMARCD1-210ENST00000551352 GJA3Q9Y6H8 435 aa9.34□□□□□ -0.91
SMARCD1-210ENST00000551352 RASSF10A6NK89 507 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 TMEM88BA6NKF7 163 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 YDJCA8MPS7 323 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 TRAF5O00463 557 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 CC2D2BQ6DHV5 1058 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 CNTROBQ8N137 903 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 TMEM57Q8N5G2 664 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 RBM17Q96I25 401 aaKnown RBP9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 RTFDC1Q9BY42 306 aaPredicted RBP9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 DDX19BQ9UMR2 479 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 ATP6V0A2Q9Y487 856 aa9.33□□□□□ -0.92
SMARCD1-210ENST00000551352 TNRC18O15417 2968 aaPredicted RBP9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 CXCL9Q07325 125 aa9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 AIMP1Q12904 312 aaKnown RBP9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 TCIRG1Q13488 830 aa9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 PARP10Q53GL7 1025 aa9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 CST9Q5W186 159 aa9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 ITPRIPQ8IWB1 547 aa9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 UTP14AQ9BVJ6 771 aaKnown RBP9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 DDX21Q9NR30 783 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 CHPF2Q9P2E5 772 aa9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
SMARCD1-210ENST00000551352 PPIP5K2O43314 1243 aa9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 HIRAP54198 1017 aaPredicted RBP9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 DLK2Q6UY11 383 aa9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 PPP1R42Q7Z4L9 355 aa9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 JDP2Q8WYK2 163 aa9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 NLRP3Q96P20 1036 aa9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 ISCA1Q9BUE6 129 aa9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 API5Q9BZZ5 524 aaKnown RBP9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 WBP1LQ9NX94 342 aa9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 PCDHB15Q9Y5E8 787 aa9.31□□□□□ -0.92
SMARCD1-210ENST00000551352 HSPA8P11142 646 aaKnown RBP9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 GMPSP49915 693 aaPredicted RBP9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms