RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 BICC1Q9H694 974 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-213ENST00000551269 C1orf115Q9H7X2 142 aa14.66□□□□□ -0.06
PRPF40B-213ENST00000551269 H0YIN7 160 aa14.65□□□□□ -0.06
PRPF40B-213ENST00000551269 C2CD5Q86YS7 1000 aa14.65□□□□□ -0.06
PRPF40B-213ENST00000551269 CD2APQ9Y5K6 639 aa14.65□□□□□ -0.06
PRPF40B-213ENST00000551269 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
PRPF40B-213ENST00000551269 RTL9Q8NET4 1388 aa14.64□□□□□ -0.07
PRPF40B-213ENST00000551269 AAMPQ13685 434 aa14.64□□□□□ -0.07
PRPF40B-213ENST00000551269 CCDC85AQ96PX6 553 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-213ENST00000551269 TGFB2P61812 414 aa14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 SF3B3Q15393 1217 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 FAM161AQ3B820 660 aa14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 CRY2Q49AN0 593 aa14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 TAF7LQ5H9L4 462 aa14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 LMBR1LQ6UX01 489 aa14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 DDX46Q7L014 1031 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 RBM17Q96I25 401 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 ZBTB40Q9NUA8 1239 aa14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 CCDC88AQ3V6T2 1871 aa14.63□□□□□ -0.07
PRPF40B-213ENST00000551269 COL4A1P02462 1669 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 NPR1P16066 1061 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 FOXO4P98177 505 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 IFIT5Q13325 482 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 CCDC57Q2TAC2 916 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 RABL6Q3YEC7 729 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 EPHA10Q5JZY3 1008 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 C3orf67Q6ZVT6 689 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 TTLL11Q8NHH1 800 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 ARAP2Q8WZ64 1704 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 ZNF622Q969S3 477 aaKnown RBP eCLIP14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 MASTLQ96GX5 879 aa14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 CDC5LQ99459 802 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 FHDC1Q9C0D6 1143 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-213ENST00000551269 FER1L6Q2WGJ9 1857 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 ANKRD18BA2A2Z9 1011 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 SRGNP10124 158 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 ITGA6P23229 1130 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 CHRNA5P30532 468 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 STYK1Q6J9G0 422 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 ANKRD44Q8N8A2 993 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 KAZALD1Q96I82 304 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 GREM2Q9H772 168 aa14.61□□□□□ -0.07
PRPF40B-213ENST00000551269 KLRG2A4D1S0 409 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-213ENST00000551269 SRGAP3O43295 1099 aa14.6□□□□□ -0.07
PRPF40B-213ENST00000551269 HMMRO75330 724 aa14.6□□□□□ -0.07
PRPF40B-213ENST00000551269 CSF1RP07333 972 aa14.6□□□□□ -0.07
PRPF40B-213ENST00000551269 IGHMBP2P38935 993 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-213ENST00000551269 GRAPQ13588 217 aa14.6□□□□□ -0.07
PRPF40B-213ENST00000551269 CEP85Q6P2H3 762 aa14.6□□□□□ -0.07
PRPF40B-213ENST00000551269 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-213ENST00000551269 LTBP1Q14766 1721 aa14.59□□□□□ -0.07
PRPF40B-213ENST00000551269 DPEP1P16444 411 aa14.59□□□□□ -0.07
PRPF40B-213ENST00000551269 ALDH1B1P30837 517 aa14.59□□□□□ -0.07
PRPF40B-213ENST00000551269 MTX1Q13505 466 aa14.59□□□□□ -0.07
PRPF40B-213ENST00000551269 ANKRD18AQ8IVF6 992 aa14.59□□□□□ -0.07
PRPF40B-213ENST00000551269 CNKSR1Q969H4 720 aa14.59□□□□□ -0.07
PRPF40B-213ENST00000551269 A0A0G2JLW4 131 aa14.58□□□□□ -0.08
PRPF40B-213ENST00000551269 PPEF1O14829 653 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-213ENST00000551269 RPAP2Q8IXW5 612 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-213ENST00000551269 NLGN2Q8NFZ4 835 aa14.58□□□□□ -0.08
PRPF40B-213ENST00000551269 CRAMP1Q96RY5 1269 aa14.58□□□□□ -0.08
PRPF40B-213ENST00000551269 MPHOSPH8Q99549 860 aa14.58□□□□□ -0.08
PRPF40B-213ENST00000551269 TMX4Q9H1E5 349 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-213ENST00000551269 CHD4Q14839 1912 aa14.57□□□□□ -0.08
PRPF40B-213ENST00000551269 DICER1Q9UPY3 1922 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-213ENST00000551269 HOXA10P31260 410 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-213ENST00000551269 SEC31BQ9NQW1 1179 aa14.57□□□□□ -0.08
PRPF40B-213ENST00000551269 PIM2Q9P1W9 311 aa14.57□□□□□ -0.08
PRPF40B-213ENST00000551269 PNMA6EA0A0J9YXQ4 647 aa14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 ATP8B2P98198 1209 aa14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 OS9Q13438 667 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 PRPF40BQ6NWY9 871 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 TMC4Q7Z404 712 aa14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 TTLL6Q8N841 843 aa14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 CELF1Q92879 486 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 SYT17Q9BSW7 474 aa14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 CNNM1Q9NRU3 951 aa14.56□□□□□ -0.08
PRPF40B-213ENST00000551269 TIAM2Q8IVF5 1701 aa14.55□□□□□ -0.08
PRPF40B-213ENST00000551269 DALRD3Q5D0E6 543 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-213ENST00000551269 WWC3Q9ULE0 1092 aa14.55□□□□□ -0.08
PRPF40B-213ENST00000551269 SBF1O95248 1867 aa14.55□□□□□ -0.08
PRPF40B-213ENST00000551269 RPS8P62241 208 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-213ENST00000551269 POLA2Q14181 598 aa14.54□□□□□ -0.08
PRPF40B-213ENST00000551269 LDHAL6AQ6ZMR3 332 aa14.54□□□□□ -0.08
PRPF40B-213ENST00000551269 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-213ENST00000551269 SSH3Q8TE77 659 aa14.54□□□□□ -0.08
PRPF40B-213ENST00000551269 ZNF594Q96JF6 807 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-213ENST00000551269 SIL1Q9H173 461 aa14.54□□□□□ -0.08
PRPF40B-213ENST00000551269 BCS1LQ9Y276 419 aa14.54□□□□□ -0.08
PRPF40B-213ENST00000551269 BBOX1O75936 387 aa14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 KCNA3P22001 575 aa14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 RFX5P48382 616 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 PTPN12Q05209 780 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 SOGA3Q5TF21 947 aa14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 KLHDC4Q8TBB5 520 aa14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 COPRSQ9NQ92 184 aa14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 PA2G4Q9UQ80 394 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms