RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 DIAPH3Q9NSV4 1193 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 ATG3Q9NT62 314 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 TMEM63CQ9P1W3 806 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 KCNG1Q9UIX4 513 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 ZDHHC9Q9Y397 364 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 PCDHGA11Q9Y5H2 935 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 REREQ9P2R6 1566 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 WDR7Q9Y4E6 1490 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 PRDM15P57071 1507 aaPredicted RBP6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 KIAA0586Q9BVV6 1533 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 RARSP54136 660 aaKnown RBP6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 CLDN10P78369 228 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 USP4Q13107 963 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 CTR9Q6PD62 1173 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 TRIM46Q7Z4K8 759 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 CEP120Q8N960 986 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 DACH1Q9UI36 760 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 KIAA1024Q9UPX6 916 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 HDAC5Q9UQL6 1122 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 KIF16BQ96L93 1317 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 PRAG1Q86YV5 1406 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 MAGI2Q86UL8 1455 aa6.41□□□□□ -1.38
LSM3P2-201ENST00000551246 HMGXB3Q12766 1538 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 EIF4G3O43432 1585 aaKnown RBP6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 AXIN1O15169 862 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 IGSF3O75054 1194 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 DKK1O94907 266 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 MBD3O95983 291 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 TPM3P06753 285 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 RLBP1P12271 317 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 BMP1P13497 986 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 RFX1P22670 979 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 GUCY2CP25092 1073 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 GTF2IP78347 998 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 CAVIN1Q6NZI2 390 aaKnown RBP6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 DHX37Q8IY37 1157 aaKnown RBP6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 FAM184AQ8NB25 1140 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 AGBL1Q96MI9 1066 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 ARID3AQ99856 593 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 NCAPGQ9BPX3 1015 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 CARD10Q9BWT7 1032 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 UBXN6Q9BZV1 441 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 CWC22Q9HCG8 908 aaKnown RBP6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 BRMS1Q9HCU9 246 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 MKRN1Q9UHC7 482 aaKnown RBP6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 NOD1Q9Y239 953 aa6.4□□□□□ -1.38
LSM3P2-201ENST00000551246 TRPM1Q7Z4N2 1603 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 CC2D2AQ9P2K1 1620 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 ZBTB7BO15156 539 aaPredicted RBP6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 STAU1O95793 577 aaKnown RBP6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 MYCP01106 439 aaPredicted RBP6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 SCNN1DP51172 638 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 BMP2KLQ5H9B9 411 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 CYP2U1Q7Z449 544 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 KRT222Q8N1A0 295 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 LINC00528Q8N1L1 170 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 DISP3Q9P2K9 1392 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 ERBINQ96RT1 1412 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 PRDM2Q13029 1718 aa6.39□□□□□ -1.39
LSM3P2-201ENST00000551246 SMTNL1A8MU46 457 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 ATP5J2-PTCD1G3V325 749 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 DHX16O60231 1041 aaKnown RBP6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 PTGIRP43119 386 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 HNRNPH2P55795 449 aaKnown RBP6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 NUCB1Q02818 461 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 PTK7Q13308 1070 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 CRTC2Q53ET0 693 aaPredicted RBP6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 MRPL14Q6P1L8 145 aaKnown RBP6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 Q6ZNB5 142 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 IQUBQ8NA54 791 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 PBXIP1Q96AQ6 731 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 KCNF1Q9H3M0 494 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 TSPY26PQ9H489 355 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 USP25Q9UHP3 1055 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 NSFL1CQ9UNZ2 370 aaKnown RBP6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 HRH3Q9Y5N1 445 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 ANKRD36BQ8N2N9 1353 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 NUP160Q12769 1436 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 IQSEC2Q5JU85 1478 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 ABCA10Q8WWZ4 1543 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 CUL7Q14999 1698 aa6.38□□□□□ -1.39
LSM3P2-201ENST00000551246 CLTCL1P53675 1640 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 LAMC3Q9Y6N6 1575 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 FAM196BA6NMK8 535 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 FAM177BA6PVY3 158 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 TMEM229AB2RXF0 380 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 WASLO00401 505 aaPredicted RBP6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 SPINT1O43278 529 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 GNRH1P01148 92 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 GSCP56915 257 aaPredicted RBP6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 RBM6P78332 1123 aaKnown RBP6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 RELBQ01201 579 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 MVPQ14764 893 aaKnown RBP6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 RABEP1Q15276 862 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 CCDC27Q2M243 656 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 ICE2Q659A1 982 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 TRIM50Q86XT4 487 aa6.37□□□□□ -1.39
LSM3P2-201ENST00000551246 CERS3Q8IU89 383 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms