RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 RTCBQ9Y3I0 505 aaKnown RBP10.33□□□□□ -0.76
GNPTAB-208ENST00000550718 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.32□□□□□ -0.76
GNPTAB-208ENST00000550718 FURINP09958 794 aa10.32□□□□□ -0.76
GNPTAB-208ENST00000550718 TRAPPC3LQ5T215 181 aa10.32□□□□□ -0.76
GNPTAB-208ENST00000550718 DHX32Q7L7V1 743 aaKnown RBP10.32□□□□□ -0.76
GNPTAB-208ENST00000550718 TREML1Q86YW5 311 aa10.32□□□□□ -0.76
GNPTAB-208ENST00000550718 PBXIP1Q96AQ6 731 aa10.32□□□□□ -0.76
GNPTAB-208ENST00000550718 PRIMPOLQ96LW4 560 aa10.32□□□□□ -0.76
GNPTAB-208ENST00000550718 CXXC1Q9P0U4 656 aaPredicted RBP10.32□□□□□ -0.76
GNPTAB-208ENST00000550718 PRMT3O60678 531 aa10.31□□□□□ -0.76
GNPTAB-208ENST00000550718 PTCD1O75127 700 aaKnown RBP10.31□□□□□ -0.76
GNPTAB-208ENST00000550718 RGS9O75916 674 aaPredicted RBP10.31□□□□□ -0.76
GNPTAB-208ENST00000550718 ELNP15502 786 aa10.31□□□□□ -0.76
GNPTAB-208ENST00000550718 BRD2P25440 801 aaKnown RBP10.31□□□□□ -0.76
GNPTAB-208ENST00000550718 C16orf46Q6P387 395 aa10.31□□□□□ -0.76
GNPTAB-208ENST00000550718 CLP1Q92989 425 aaKnown RBP10.31□□□□□ -0.76
GNPTAB-208ENST00000550718 A0A0A0MRY4 1105 aa10.3□□□□□ -0.76
GNPTAB-208ENST00000550718 RARAP10276 462 aa10.3□□□□□ -0.76
GNPTAB-208ENST00000550718 TARSP26639 723 aaKnown RBP10.3□□□□□ -0.76
GNPTAB-208ENST00000550718 NRLP54845 237 aa10.3□□□□□ -0.76
GNPTAB-208ENST00000550718 FAM35AQ86V20 835 aa10.3□□□□□ -0.76
GNPTAB-208ENST00000550718 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
GNPTAB-208ENST00000550718 C9orf172C9J069 976 aa10.29□□□□□ -0.76
GNPTAB-208ENST00000550718 HOXD8P13378 290 aaPredicted RBP10.29□□□□□ -0.76
GNPTAB-208ENST00000550718 RAC1P63000 192 aa10.29□□□□□ -0.76
GNPTAB-208ENST00000550718 DTWD1Q8N5C7 304 aa10.29□□□□□ -0.76
GNPTAB-208ENST00000550718 NUDT8Q8WV74 236 aa10.29□□□□□ -0.76
GNPTAB-208ENST00000550718 TLR7Q9NYK1 1049 aaKnown RBP10.29□□□□□ -0.76
GNPTAB-208ENST00000550718 ZBTB42B2RXF5 422 aa10.28□□□□□ -0.76
GNPTAB-208ENST00000550718 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
GNPTAB-208ENST00000550718 XYLBO75191 536 aa10.28□□□□□ -0.76
GNPTAB-208ENST00000550718 SASH3O75995 380 aa10.28□□□□□ -0.76
GNPTAB-208ENST00000550718 TMEM164Q5U3C3 297 aa10.28□□□□□ -0.76
GNPTAB-208ENST00000550718 LPIN3Q9BQK8 851 aa10.28□□□□□ -0.76
GNPTAB-208ENST00000550718 KCNMB2Q9Y691 235 aa10.28□□□□□ -0.76
GNPTAB-208ENST00000550718 SOX18P35713 384 aa10.27□□□□□ -0.77
GNPTAB-208ENST00000550718 NRG1Q02297 640 aaPredicted RBP10.27□□□□□ -0.77
GNPTAB-208ENST00000550718 ETFBKMTQ8IXQ9 262 aa10.27□□□□□ -0.77
GNPTAB-208ENST00000550718 RGL4Q8IZJ4 473 aa10.27□□□□□ -0.77
GNPTAB-208ENST00000550718 LENG1Q96BZ8 264 aaPredicted RBP10.27□□□□□ -0.77
GNPTAB-208ENST00000550718 FAM13BQ9NYF5 915 aa10.27□□□□□ -0.77
GNPTAB-208ENST00000550718 GRIK4Q16099 956 aa10.26□□□□□ -0.77
GNPTAB-208ENST00000550718 GRIK5Q16478 980 aa10.26□□□□□ -0.77
GNPTAB-208ENST00000550718 MSL1Q68DK7 614 aa10.26□□□□□ -0.77
GNPTAB-208ENST00000550718 KRT25Q7Z3Z0 450 aa10.26□□□□□ -0.77
GNPTAB-208ENST00000550718 CPB1P15086 417 aa10.25□□□□□ -0.77
GNPTAB-208ENST00000550718 DOC2BQ14184 412 aa10.25□□□□□ -0.77
GNPTAB-208ENST00000550718 ADGRE1Q14246 886 aa10.25□□□□□ -0.77
GNPTAB-208ENST00000550718 PERM1Q5SV97 790 aa10.25□□□□□ -0.77
GNPTAB-208ENST00000550718 ELMSAN1Q6PJG2 1045 aa10.25□□□□□ -0.77
GNPTAB-208ENST00000550718 FMR1NBQ8N0W7 255 aaPredicted RBP10.25□□□□□ -0.77
GNPTAB-208ENST00000550718 CMTR1Q8N1G2 835 aaKnown RBP10.25□□□□□ -0.77
GNPTAB-208ENST00000550718 SAP130Q9H0E3 1048 aa10.25□□□□□ -0.77
GNPTAB-208ENST00000550718 SELPP16109 830 aa10.24□□□□□ -0.77
GNPTAB-208ENST00000550718 PLAURQ03405 335 aa10.24□□□□□ -0.77
GNPTAB-208ENST00000550718 TNFRSF10BO14763 440 aa10.23□□□□□ -0.77
GNPTAB-208ENST00000550718 PSAPP07602 524 aa10.23□□□□□ -0.77
GNPTAB-208ENST00000550718 NKAPLQ5M9Q1 402 aa10.23□□□□□ -0.77
GNPTAB-208ENST00000550718 MBTPS1Q14703 1052 aa10.22□□□□□ -0.77
GNPTAB-208ENST00000550718 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
GNPTAB-208ENST00000550718 DMRTC2Q8IXT2 367 aaPredicted RBP10.22□□□□□ -0.77
GNPTAB-208ENST00000550718 PIK3R5Q8WYR1 880 aa10.22□□□□□ -0.77
GNPTAB-208ENST00000550718 TPSG1Q9NRR2 321 aa10.22□□□□□ -0.77
GNPTAB-208ENST00000550718 USP20Q9Y2K6 914 aa10.22□□□□□ -0.77
GNPTAB-208ENST00000550718 GTF3C3Q9Y5Q9 886 aa10.22□□□□□ -0.77
GNPTAB-208ENST00000550718 MMP20O60882 483 aa10.21□□□□□ -0.77
GNPTAB-208ENST00000550718 RSPO4Q2I0M5 234 aaPredicted RBP10.21□□□□□ -0.77
GNPTAB-208ENST00000550718 FBXO11Q86XK2 927 aa10.21□□□□□ -0.77
GNPTAB-208ENST00000550718 STIM2Q9P246 746 aa10.21□□□□□ -0.77
GNPTAB-208ENST00000550718 LOC102724428A0A0B4J2F2 783 aa10.2□□□□□ -0.78
GNPTAB-208ENST00000550718 SIK1P57059 783 aa10.2□□□□□ -0.78
GNPTAB-208ENST00000550718 TXNRD3Q86VQ6 643 aa10.2□□□□□ -0.78
GNPTAB-208ENST00000550718 WFDC8Q8IUA0 241 aa10.2□□□□□ -0.78
GNPTAB-208ENST00000550718 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
GNPTAB-208ENST00000550718 SEMA6BQ9H3T3 888 aa10.2□□□□□ -0.78
GNPTAB-208ENST00000550718 FNDC3AQ9Y2H6 1198 aaKnown RBP10.2□□□□□ -0.78
GNPTAB-208ENST00000550718 TRIP4Q15650 581 aaPredicted RBP10.19□□□□□ -0.78
GNPTAB-208ENST00000550718 FAM26DQ5JW98 314 aa10.19□□□□□ -0.78
GNPTAB-208ENST00000550718 CAPN12Q6ZSI9 719 aa10.19□□□□□ -0.78
GNPTAB-208ENST00000550718 CACTIN-AS1Q8N1I8 211 aa10.19□□□□□ -0.78
GNPTAB-208ENST00000550718 MKNK1Q9BUB5 465 aa10.19□□□□□ -0.78
GNPTAB-208ENST00000550718 SMG9Q9H0W8 520 aaKnown RBP10.19□□□□□ -0.78
GNPTAB-208ENST00000550718 EIF2AK2P19525 551 aaKnown RBP10.18□□□□□ -0.78
GNPTAB-208ENST00000550718 ITGB7P26010 798 aa10.18□□□□□ -0.78
GNPTAB-208ENST00000550718 MLLT1Q03111 559 aaPredicted RBP10.18□□□□□ -0.78
GNPTAB-208ENST00000550718 RBSNQ9H1K0 784 aa10.18□□□□□ -0.78
GNPTAB-208ENST00000550718 PPP1R15AO75807 674 aaPredicted RBP10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 H2AFB1P0C5Y9 115 aa10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 H2AFB2P0C5Z0 115 aa10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 ATP2B4P23634 1241 aa10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 ZAP70P43403 619 aa10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 NAA30Q147X3 362 aaPredicted RBP10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 PLD4Q96BZ4 506 aa10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 SRA1Q9HD15 236 aaKnown RBP10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 SLAIN2Q9P270 581 aa10.17□□□□□ -0.78
GNPTAB-208ENST00000550718 UBAP1LF5GYI3 381 aa10.16□□□□□ -0.78
GNPTAB-208ENST00000550718 GHRHP01286 108 aa10.16□□□□□ -0.78
GNPTAB-208ENST00000550718 IGF2-ASQ6U949 168 aa10.16□□□□□ -0.78
GNPTAB-208ENST00000550718 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
GNPTAB-208ENST00000550718 OR13H1Q8NG92 308 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms