RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
CACNB3-215ENST00000550190 ANKRD44Q8N8A2 993 aa11.24□□□□□ -0.61
CACNB3-215ENST00000550190 TTLL11Q8NHH1 800 aa11.24□□□□□ -0.61
CACNB3-215ENST00000550190 RPGRQ92834 1020 aaKnown RBP11.24□□□□□ -0.61
CACNB3-215ENST00000550190 H0YIN7 160 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 SRGAP3O43295 1099 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 CSF1RP07333 972 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 CHRNA5P30532 468 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 ATP8B2P98198 1209 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 AAMPQ13685 434 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
CACNB3-215ENST00000550190 CCDC57Q2TAC2 916 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 TAF7LQ5H9L4 462 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 DDX46Q7L014 1031 aaKnown RBP11.23□□□□□ -0.61
CACNB3-215ENST00000550190 RPAP2Q8IXW5 612 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-215ENST00000550190 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.61
CACNB3-215ENST00000550190 GREM2Q9H772 168 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
CACNB3-215ENST00000550190 COL11A2P13942 1736 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-215ENST00000550190 PNMA6EA0A0J9YXQ4 647 aa11.22□□□□□ -0.61
CACNB3-215ENST00000550190 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
CACNB3-215ENST00000550190 ITGA6P23229 1130 aa11.22□□□□□ -0.61
CACNB3-215ENST00000550190 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
CACNB3-215ENST00000550190 RABL6Q3YEC7 729 aaPredicted RBP11.22□□□□□ -0.61
CACNB3-215ENST00000550190 C10orf71Q711Q0 1435 aa11.22□□□□□ -0.61
CACNB3-215ENST00000550190 RBM17Q96I25 401 aaKnown RBP11.22□□□□□ -0.61
CACNB3-215ENST00000550190 ZNF594Q96JF6 807 aaPredicted RBP11.22□□□□□ -0.61
CACNB3-215ENST00000550190 PCDHB15Q9Y5E8 787 aa11.22□□□□□ -0.61
CACNB3-215ENST00000550190 RIC1Q4ADV7 1423 aa11.21□□□□□ -0.61
CACNB3-215ENST00000550190 A0A0G2JLW4 131 aa11.21□□□□□ -0.61
CACNB3-215ENST00000550190 HMMRO75330 724 aa11.21□□□□□ -0.61
CACNB3-215ENST00000550190 NPR1P16066 1061 aa11.21□□□□□ -0.61
CACNB3-215ENST00000550190 DPEP1P16444 411 aa11.21□□□□□ -0.61
CACNB3-215ENST00000550190 KLHDC4Q8TBB5 520 aa11.21□□□□□ -0.61
CACNB3-215ENST00000550190 CD2APQ9Y5K6 639 aa11.21□□□□□ -0.61
CACNB3-215ENST00000550190 SRGNP10124 158 aa11.2□□□□□ -0.62
CACNB3-215ENST00000550190 TGFB2P61812 414 aa11.2□□□□□ -0.62
CACNB3-215ENST00000550190 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
CACNB3-215ENST00000550190 MASTLQ96GX5 879 aa11.2□□□□□ -0.62
CACNB3-215ENST00000550190 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
CACNB3-215ENST00000550190 FHDC1Q9C0D6 1143 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-215ENST00000550190 WWC3Q9ULE0 1092 aa11.2□□□□□ -0.62
CACNB3-215ENST00000550190 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
CACNB3-215ENST00000550190 PA2G4Q9UQ80 394 aaKnown RBP11.2□□□□□ -0.62
CACNB3-215ENST00000550190 DLEC1Q9Y238 1755 aa11.2□□□□□ -0.62
CACNB3-215ENST00000550190 KIAA1551Q9HCM1 1747 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-215ENST00000550190 ALDH1B1P30837 517 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 IGHMBP2P38935 993 aaKnown RBP11.19□□□□□ -0.62
CACNB3-215ENST00000550190 MTX1Q13505 466 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 CRY2Q49AN0 593 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 STYK1Q6J9G0 422 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 ANKRD18AQ8IVF6 992 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 SIRT2Q8IXJ6 389 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 SSH3Q8TE77 659 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 CRAMP1Q96RY5 1269 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 MPHOSPH8Q99549 860 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 SIL1Q9H173 461 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
CACNB3-215ENST00000550190 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-215ENST00000550190 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 COL4A1P02462 1669 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 SURF6O75683 361 aaKnown RBP11.18□□□□□ -0.62
CACNB3-215ENST00000550190 HOXA10P31260 410 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-215ENST00000550190 RFX5P48382 616 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-215ENST00000550190 RPS8P62241 208 aaKnown RBP11.18□□□□□ -0.62
CACNB3-215ENST00000550190 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
CACNB3-215ENST00000550190 OS9Q13438 667 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-215ENST00000550190 GRAPQ13588 217 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 POLA2Q14181 598 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 LDHAL6AQ6ZMR3 332 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 NLGN2Q8NFZ4 835 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 GRAPLQ8TC17 118 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-215ENST00000550190 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 BCL11AQ9H165 835 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 RWDD1Q9H446 243 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-215ENST00000550190 PIM2Q9P1W9 311 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 SLX4Q8IY92 1834 aa11.18□□□□□ -0.62
CACNB3-215ENST00000550190 APBB1O00213 710 aa11.17□□□□□ -0.62
CACNB3-215ENST00000550190 G3BP1Q13283 466 aaKnown RBP eCLIP11.17□□□□□ -0.62
CACNB3-215ENST00000550190 LRRC24Q50LG9 513 aa11.17□□□□□ -0.62
CACNB3-215ENST00000550190 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
CACNB3-215ENST00000550190 SYT17Q9BSW7 474 aa11.17□□□□□ -0.62
CACNB3-215ENST00000550190 PUS3Q9BZE2 481 aaKnown RBP11.17□□□□□ -0.62
CACNB3-215ENST00000550190 EXOC6BQ9Y2D4 811 aa11.17□□□□□ -0.62
CACNB3-215ENST00000550190 LRP5O75197 1615 aa11.17□□□□□ -0.62
CACNB3-215ENST00000550190 EYA2O00167 538 aa11.16□□□□□ -0.62
CACNB3-215ENST00000550190 PPEF1O14829 653 aaPredicted RBP11.16□□□□□ -0.62
CACNB3-215ENST00000550190 BBOX1O75936 387 aa11.16□□□□□ -0.62
CACNB3-215ENST00000550190 IGHDP01880 384 aa11.16□□□□□ -0.62
CACNB3-215ENST00000550190 KCNA3P22001 575 aa11.16□□□□□ -0.62
CACNB3-215ENST00000550190 B4GALNT3Q6L9W6 998 aa11.16□□□□□ -0.62
CACNB3-215ENST00000550190 TTLL6Q8N841 843 aa11.16□□□□□ -0.62
CACNB3-215ENST00000550190 TMX4Q9H1E5 349 aaPredicted RBP11.16□□□□□ -0.62
CACNB3-215ENST00000550190 COPRSQ9NQ92 184 aa11.16□□□□□ -0.62
CACNB3-215ENST00000550190 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
CACNB3-215ENST00000550190 BRCA1P38398 1863 aaKnown RBP11.16□□□□□ -0.62
CACNB3-215ENST00000550190 HDAC1Q13547 482 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms