RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 ASTN2O75129 1339 aaPredicted RBP11.6□□□□□ -0.55
AC055716.1-201ENST00000550077 ERVV-1B6SEH8 477 aa11.6□□□□□ -0.55
AC055716.1-201ENST00000550077 NOGQ13253 232 aa11.6□□□□□ -0.55
AC055716.1-201ENST00000550077 CDC37L1Q7L3B6 337 aa11.6□□□□□ -0.55
AC055716.1-201ENST00000550077 THUMPD2Q9BTF0 503 aaKnown RBP11.6□□□□□ -0.55
AC055716.1-201ENST00000550077 BCL2L13Q9BXK5 485 aa11.6□□□□□ -0.55
AC055716.1-201ENST00000550077 RTFDC1Q9BY42 306 aaPredicted RBP11.6□□□□□ -0.55
AC055716.1-201ENST00000550077 RGMBQ6NW40 437 aa11.59□□□□□ -0.55
AC055716.1-201ENST00000550077 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
AC055716.1-201ENST00000550077 CSRNP1Q96S65 589 aa11.59□□□□□ -0.55
AC055716.1-201ENST00000550077 SCN9AQ15858 1988 aa11.58□□□□□ -0.56
AC055716.1-201ENST00000550077 ANXA1P04083 346 aa11.58□□□□□ -0.56
AC055716.1-201ENST00000550077 KIAA2012Q0VF49 1180 aa11.58□□□□□ -0.56
AC055716.1-201ENST00000550077 TAF7Q15545 349 aaPredicted RBP11.58□□□□□ -0.56
AC055716.1-201ENST00000550077 TBC1D10BQ4KMP7 808 aaPredicted RBP11.58□□□□□ -0.56
AC055716.1-201ENST00000550077 PRPF38BQ5VTL8 546 aaKnown RBP11.58□□□□□ -0.56
AC055716.1-201ENST00000550077 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
AC055716.1-201ENST00000550077 LRRC37AA6NMS7 1700 aa11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 IBTKQ9P2D0 1353 aaPredicted RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 HCLS1P14317 486 aaPredicted RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 GRIPAP1Q4V328 841 aa11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 SLC10A5Q5PT55 438 aa11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 RBM26Q5T8P6 1007 aaKnown RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 DPP8Q6V1X1 898 aaPredicted RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 GIGYF2Q6Y7W6 1299 aaKnown RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 LRP10Q7Z4F1 713 aa11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 SP8Q8IXZ3 490 aa11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 CCER1Q8TC90 406 aaPredicted RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 GBA2Q9HCG7 927 aaPredicted RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 HPS5Q9UPZ3 1129 aa11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 DDX60Q8IY21 1712 aaKnown RBP11.57□□□□□ -0.56
AC055716.1-201ENST00000550077 PSMD14O00487 310 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 ZNF157P51786 506 aaPredicted RBP11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 PROSER3Q2NL68 480 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 KIF6Q6ZMV9 814 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 KRT26Q7Z3Y9 468 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 MPNDQ8N594 471 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 SAGE1Q9NXZ1 904 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 SCAF8Q9UPN6 1271 aaKnown RBP11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 CLSPNQ9HAW4 1339 aa11.56□□□□□ -0.56
AC055716.1-201ENST00000550077 RTL9Q8NET4 1388 aa11.55□□□□□ -0.56
AC055716.1-201ENST00000550077 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
AC055716.1-201ENST00000550077 U2AF1L5P0DN76 240 aaPredicted RBP11.55□□□□□ -0.56
AC055716.1-201ENST00000550077 U2AF1Q01081 240 aaKnown RBP eCLIP11.55□□□□□ -0.56
AC055716.1-201ENST00000550077 PDIA6Q15084 440 aa11.55□□□□□ -0.56
AC055716.1-201ENST00000550077 MOB2Q70IA6 237 aa11.55□□□□□ -0.56
AC055716.1-201ENST00000550077 VPS33BQ9H267 617 aa11.55□□□□□ -0.56
AC055716.1-201ENST00000550077 H7C1D1 291 aa11.54□□□□□ -0.56
AC055716.1-201ENST00000550077 SLC10A3P09131 477 aa11.54□□□□□ -0.56
AC055716.1-201ENST00000550077 TNIP1Q15025 636 aa11.54□□□□□ -0.56
AC055716.1-201ENST00000550077 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
AC055716.1-201ENST00000550077 SUPT20HQ8NEM7 779 aa11.54□□□□□ -0.56
AC055716.1-201ENST00000550077 CDHR2Q9BYE9 1310 aa11.54□□□□□ -0.56
AC055716.1-201ENST00000550077 BBOX1O75936 387 aa11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 DOK7Q18PE1 504 aa11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 PPP1R42Q7Z4L9 355 aa11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 RASAL3Q86YV0 1011 aa11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 UTP14AQ9BVJ6 771 aaKnown RBP11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 R3HDMLQ9H3Y0 253 aa11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 POLLQ9UGP5 575 aa11.53□□□□□ -0.56
AC055716.1-201ENST00000550077 HTATSF1O43719 755 aaKnown RBP11.52□□□□□ -0.57
AC055716.1-201ENST00000550077 DPF2Q92785 391 aa11.52□□□□□ -0.57
AC055716.1-201ENST00000550077 CCDC102AQ96A19 550 aa11.52□□□□□ -0.57
AC055716.1-201ENST00000550077 CDCA5Q96FF9 252 aa11.52□□□□□ -0.57
AC055716.1-201ENST00000550077 GPSM2P81274 684 aa11.51□□□□□ -0.57
AC055716.1-201ENST00000550077 GRAPQ13588 217 aa11.51□□□□□ -0.57
AC055716.1-201ENST00000550077 NLRP10Q86W26 655 aa11.51□□□□□ -0.57
AC055716.1-201ENST00000550077 GRAPLQ8TC17 118 aaPredicted RBP11.51□□□□□ -0.57
AC055716.1-201ENST00000550077 ZNF296Q8WUU4 475 aaPredicted RBP11.51□□□□□ -0.57
AC055716.1-201ENST00000550077 CELF1Q92879 486 aaKnown RBP11.51□□□□□ -0.57
AC055716.1-201ENST00000550077 ECE2O60344 883 aa11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 EIF2S2P20042 333 aaKnown RBP11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 PPP2R1AP30153 589 aa11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 PARP10Q53GL7 1025 aa11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 PRAMEF18Q5VWM3 479 aa11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 NECTIN2Q92692 538 aa11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 DCPSQ96C86 337 aaKnown RBP11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 TMX4Q9H1E5 349 aaPredicted RBP11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 GGA3Q9NZ52 723 aa11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 NSFL1CQ9UNZ2 370 aaKnown RBP11.5□□□□□ -0.57
AC055716.1-201ENST00000550077 AIMP1Q12904 312 aaKnown RBP11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 KIF4BQ2VIQ3 1234 aa11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 HABP4Q5JVS0 413 aaKnown RBP11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 CFAP53Q96M91 514 aa11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 PAPPA2Q9BXP8 1791 aa11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 ZNF646O15015 1829 aaPredicted RBP11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 PSME4Q14997 1843 aa11.49□□□□□ -0.57
AC055716.1-201ENST00000550077 WTIPA6NIX2 430 aaPredicted RBP11.48□□□□□ -0.57
AC055716.1-201ENST00000550077 UBE2Q2LH0YL09 131 aa11.48□□□□□ -0.57
AC055716.1-201ENST00000550077 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
AC055716.1-201ENST00000550077 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
AC055716.1-201ENST00000550077 ANGEL2Q5VTE6 544 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms