RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
UBE2N-204ENST00000549833 FAM135AQ9P2D6 1515 aa9.54□□□□□ -0.88
UBE2N-204ENST00000549833 SETD5Q9C0A6 1442 aa9.54□□□□□ -0.88
UBE2N-204ENST00000549833 MYO5BQ9ULV0 1848 aa9.54□□□□□ -0.88
UBE2N-204ENST00000549833 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 H7C1W4 665 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 F11P03951 625 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 TATP17735 454 aaPredicted RBP9.53□□□□□ -0.88
UBE2N-204ENST00000549833 NFX1Q12986 1120 aaKnown RBP9.53□□□□□ -0.88
UBE2N-204ENST00000549833 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 PGBD3Q8N328 593 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 SCG3Q8WXD2 468 aaKnown RBP9.53□□□□□ -0.88
UBE2N-204ENST00000549833 IRF7Q92985 503 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 AIDAQ96BJ3 306 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 GPAMQ9HCL2 828 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 CNTLNQ9NXG0 1405 aa9.53□□□□□ -0.88
UBE2N-204ENST00000549833 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
UBE2N-204ENST00000549833 CDC14CA4D256 554 aa9.52□□□□□ -0.89
UBE2N-204ENST00000549833 WFS1O76024 890 aa9.52□□□□□ -0.89
UBE2N-204ENST00000549833 IGFBP4P22692 258 aa9.52□□□□□ -0.89
UBE2N-204ENST00000549833 NOS2P35228 1153 aa9.52□□□□□ -0.89
UBE2N-204ENST00000549833 ZDHHC1Q8WTX9 485 aa9.52□□□□□ -0.89
UBE2N-204ENST00000549833 L3MBTL2Q969R5 705 aa9.52□□□□□ -0.89
UBE2N-204ENST00000549833 GMCL1Q96IK5 515 aa9.52□□□□□ -0.89
UBE2N-204ENST00000549833 WASHC2CQ9Y4E1 1318 aa9.52□□□□□ -0.89
UBE2N-204ENST00000549833 EFCAB6Q5THR3 1501 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 LMTK2Q8IWU2 1503 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 KANK1Q14678 1352 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 RAB3GAP2Q9H2M9 1393 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 SPHKAPQ2M3C7 1700 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 MSX1P28360 303 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 CEBPAP49715 358 aaPredicted RBP9.51□□□□□ -0.89
UBE2N-204ENST00000549833 TRIM22Q8IYM9 498 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 STAG2Q8N3U4 1231 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 PARP3Q9Y6F1 533 aa9.51□□□□□ -0.89
UBE2N-204ENST00000549833 NUP155O75694 1391 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 EML1O00423 815 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 FOXO3O43524 673 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 C21orf2O43822 256 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 LGR5O75473 907 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 VSIG8P0DPA2 414 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 ATP4AP20648 1035 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 HIRAP54198 1017 aaPredicted RBP9.5□□□□□ -0.89
UBE2N-204ENST00000549833 SV2AQ7L0J3 742 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
UBE2N-204ENST00000549833 ZNF837Q96EG3 531 aaPredicted RBP9.5□□□□□ -0.89
UBE2N-204ENST00000549833 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
UBE2N-204ENST00000549833 ZMYM3Q14202 1370 aa9.5□□□□□ -0.89
UBE2N-204ENST00000549833 PZPP20742 1482 aa9.49□□□□□ -0.89
UBE2N-204ENST00000549833 LBRQ14739 615 aaKnown RBP9.49□□□□□ -0.89
UBE2N-204ENST00000549833 EFHC2Q5JST6 749 aa9.49□□□□□ -0.89
UBE2N-204ENST00000549833 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
UBE2N-204ENST00000549833 RUBCNLQ9H714 662 aa9.49□□□□□ -0.89
UBE2N-204ENST00000549833 MYO3AQ8NEV4 1616 aa9.49□□□□□ -0.89
UBE2N-204ENST00000549833 WEE1P30291 646 aa9.48□□□□□ -0.89
UBE2N-204ENST00000549833 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
UBE2N-204ENST00000549833 VTI1AQ96AJ9 217 aa9.48□□□□□ -0.89
UBE2N-204ENST00000549833 CRISPLD1Q9H336 500 aa9.48□□□□□ -0.89
UBE2N-204ENST00000549833 CUEDC1Q9NWM3 386 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-204ENST00000549833 KIF1BO60333 1816 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 SYNMO15061 1565 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 SPATA31D1Q6ZQQ2 1576 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 TXLNAP40222 546 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
UBE2N-204ENST00000549833 SH3PXD2AQ5TCZ1 1133 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 FOXR1Q6PIV2 292 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 VWA5B2Q8N398 1253 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 CLP1Q92989 425 aaKnown RBP9.47□□□□□ -0.89
UBE2N-204ENST00000549833 C2orf49Q9BVC5 232 aaPredicted RBP9.47□□□□□ -0.89
UBE2N-204ENST00000549833 GPC6Q9Y625 555 aaPredicted RBP9.47□□□□□ -0.89
UBE2N-204ENST00000549833 ZNF142P52746 1687 aaPredicted RBP9.47□□□□□ -0.89
UBE2N-204ENST00000549833 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 NPATQ14207 1427 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 ERVK-7P63135 1459 aa9.47□□□□□ -0.89
UBE2N-204ENST00000549833 PRMT3O60678 531 aa9.46□□□□□ -0.9
UBE2N-204ENST00000549833 RHPN1Q8TCX5 695 aa9.46□□□□□ -0.9
UBE2N-204ENST00000549833 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.9
UBE2N-204ENST00000549833 USTQ9Y2C2 406 aa9.46□□□□□ -0.9
UBE2N-204ENST00000549833 ARHGAP31Q2M1Z3 1444 aa9.46□□□□□ -0.9
UBE2N-204ENST00000549833 DBN1Q16643 649 aa9.45□□□□□ -0.9
UBE2N-204ENST00000549833 C1orf53Q5VUE5 145 aa9.45□□□□□ -0.9
UBE2N-204ENST00000549833 PRIMPOLQ96LW4 560 aa9.45□□□□□ -0.9
UBE2N-204ENST00000549833 PHACTR1Q9C0D0 580 aa9.45□□□□□ -0.9
UBE2N-204ENST00000549833 GJA3Q9Y6H8 435 aa9.45□□□□□ -0.9
UBE2N-204ENST00000549833 PIK3C2BO00750 1634 aa9.45□□□□□ -0.9
UBE2N-204ENST00000549833 UBR1Q8IWV7 1749 aa9.45□□□□□ -0.9
UBE2N-204ENST00000549833 FIGNL1Q6PIW4 674 aa9.44□□□□□ -0.9
UBE2N-204ENST00000549833 NLRP8Q86W28 1048 aa9.44□□□□□ -0.9
UBE2N-204ENST00000549833 TRERF1Q96PN7 1200 aa9.44□□□□□ -0.9
UBE2N-204ENST00000549833 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
UBE2N-204ENST00000549833 HCN4Q9Y3Q4 1203 aa9.44□□□□□ -0.9
UBE2N-204ENST00000549833 RPRD2Q5VT52 1461 aaKnown RBP9.44□□□□□ -0.9
UBE2N-204ENST00000549833 CLTCL1P53675 1640 aa9.43□□□□□ -0.9
UBE2N-204ENST00000549833 UGGT1Q9NYU2 1555 aa9.43□□□□□ -0.9
UBE2N-204ENST00000549833 TNRQ92752 1358 aa9.43□□□□□ -0.9
UBE2N-204ENST00000549833 A0A1W2PNR3 127 aa9.43□□□□□ -0.9
UBE2N-204ENST00000549833 TMEM88BA6NKF7 163 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms