RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 LCE2AQ5TA79 106 aaPredicted RBP9.09□□□□□ -0.95
COX6A1-202ENST00000549525 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
COX6A1-202ENST00000549525 DNAAF2Q9NVR5 837 aaKnown RBP9.09□□□□□ -0.95
COX6A1-202ENST00000549525 SERTAD1Q9UHV2 236 aa9.09□□□□□ -0.95
COX6A1-202ENST00000549525 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
COX6A1-202ENST00000549525 GPRASP1Q5JY77 1395 aa9.09□□□□□ -0.95
COX6A1-202ENST00000549525 SLC35F4A4IF30 521 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 SPATA31C2B4DYI2 1134 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 H3BM21 787 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 TLR1Q15399 786 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 NBPF1Q3BBV0 1214 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 CDCA8Q53HL2 280 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 TMEM132EQ6IEE7 984 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 CCDC155Q8N6L0 562 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 TPCN2Q8NHX9 752 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 SLC4A9Q96Q91 983 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 ZNF358Q9NW07 568 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 STK26Q9P289 416 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 TRAK1Q9UPV9 953 aa9.08□□□□□ -0.96
COX6A1-202ENST00000549525 YTHDC2Q9H6S0 1430 aaKnown RBP9.07□□□□□ -0.96
COX6A1-202ENST00000549525 NCOA3Q9Y6Q9 1424 aa9.07□□□□□ -0.96
COX6A1-202ENST00000549525 PPFIA3O75145 1194 aa9.07□□□□□ -0.96
COX6A1-202ENST00000549525 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
COX6A1-202ENST00000549525 CRTC2Q53ET0 693 aaPredicted RBP9.07□□□□□ -0.96
COX6A1-202ENST00000549525 NBPF10Q6P3W6 841 aaKnown RBP9.07□□□□□ -0.96
COX6A1-202ENST00000549525 NBPF15Q8N660 670 aa9.07□□□□□ -0.96
COX6A1-202ENST00000549525 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
COX6A1-202ENST00000549525 ZSCAN10Q96SZ4 725 aaPredicted RBP9.07□□□□□ -0.96
COX6A1-202ENST00000549525 USP3Q9Y6I4 520 aa9.07□□□□□ -0.96
COX6A1-202ENST00000549525 METP08581 1390 aa9.07□□□□□ -0.96
COX6A1-202ENST00000549525 STRCQ7RTU9 1775 aa9.07□□□□□ -0.96
COX6A1-202ENST00000549525 FAM135BQ49AJ0 1406 aa9.06□□□□□ -0.96
COX6A1-202ENST00000549525 RASA1P20936 1047 aa9.06□□□□□ -0.96
COX6A1-202ENST00000549525 SMTNP53814 917 aa9.06□□□□□ -0.96
COX6A1-202ENST00000549525 CCDC102BQ68D86 513 aa9.06□□□□□ -0.96
COX6A1-202ENST00000549525 TREML4Q6UXN2 200 aa9.06□□□□□ -0.96
COX6A1-202ENST00000549525 SIX5Q8N196 739 aa9.06□□□□□ -0.96
COX6A1-202ENST00000549525 LARGE2Q8N3Y3 721 aa9.06□□□□□ -0.96
COX6A1-202ENST00000549525 CENPJQ9HC77 1338 aaPredicted RBP9.05□□□□□ -0.96
COX6A1-202ENST00000549525 TECPR2O15040 1411 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 NKTRP30414 1462 aaKnown RBP9.05□□□□□ -0.96
COX6A1-202ENST00000549525 RFX1P22670 979 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 EPHA4P54764 986 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 SRPK2P78362 688 aaKnown RBP9.05□□□□□ -0.96
COX6A1-202ENST00000549525 PTK7Q13308 1070 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 MTFR1Q15390 333 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 NPAS3Q8IXF0 933 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 ZNF295-AS1Q8N0V1 137 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 IQSEC3Q9UPP2 1182 aaPredicted RBP9.05□□□□□ -0.96
COX6A1-202ENST00000549525 TRPM1Q7Z4N2 1603 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 CPS1P31327 1500 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 PTCH1Q13635 1447 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
COX6A1-202ENST00000549525 TMF1P82094 1093 aa9.04□□□□□ -0.96
COX6A1-202ENST00000549525 C4orf17Q53FE4 359 aa9.04□□□□□ -0.96
COX6A1-202ENST00000549525 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
COX6A1-202ENST00000549525 PRAM1Q96QH2 718 aa9.04□□□□□ -0.96
COX6A1-202ENST00000549525 C19orf44Q9H6X5 657 aa9.04□□□□□ -0.96
COX6A1-202ENST00000549525 VRTNQ9H8Y1 702 aa9.04□□□□□ -0.96
COX6A1-202ENST00000549525 DLC1Q96QB1 1528 aa9.04□□□□□ -0.96
COX6A1-202ENST00000549525 USP47Q96K76 1375 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 NRXN3Q9Y4C0 1643 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 A6NJY4 79 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 SFI1A8K8P3 1242 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L15C9J2P7 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L10C9JJH3 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L13C9JLJ4 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L11C9JVI0 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L21D6R901 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L18D6R9N7 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L22D6RA61 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L17D6RBQ6 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L19D6RCP7 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L20D6RJB6 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 WFS1O76024 890 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 ATF3P18847 181 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 PHKA2P46019 1235 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 USP17L24Q0WX57 530 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 TMEM214Q6NUQ4 689 aaKnown RBP9.03□□□□□ -0.96
COX6A1-202ENST00000549525 TAS1R3Q7RTX0 852 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
COX6A1-202ENST00000549525 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
COX6A1-202ENST00000549525 SERPINA10Q9UK55 444 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 ADGRB1O14514 1584 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
COX6A1-202ENST00000549525 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
COX6A1-202ENST00000549525 ST20-MTHFSA0A0A6YYL1 179 aa9.02□□□□□ -0.97
COX6A1-202ENST00000549525 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
COX6A1-202ENST00000549525 ITGA6P23229 1130 aa9.02□□□□□ -0.97
COX6A1-202ENST00000549525 FOXK2Q01167 660 aa9.02□□□□□ -0.97
COX6A1-202ENST00000549525 WDR44Q5JSH3 913 aa9.02□□□□□ -0.97
COX6A1-202ENST00000549525 DIEXFQ68CQ4 756 aaKnown RBP9.02□□□□□ -0.97
COX6A1-202ENST00000549525 TNS4Q8IZW8 715 aa9.02□□□□□ -0.97
COX6A1-202ENST00000549525 RHBDD1Q8TEB9 315 aa9.02□□□□□ -0.97
COX6A1-202ENST00000549525 CCDC97Q96F63 343 aaPredicted RBP9.02□□□□□ -0.97
COX6A1-202ENST00000549525 ARXQ96QS3 562 aa9.02□□□□□ -0.97
COX6A1-202ENST00000549525 SCHIP1Q9P0W5 487 aaPredicted RBP9.02□□□□□ -0.97
COX6A1-202ENST00000549525 CHD2O14647 1828 aaKnown RBP9.02□□□□□ -0.97
COX6A1-202ENST00000549525 ZNF335Q9H4Z2 1342 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms