RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 NTSR2O95665 410 aa20.4■□□□□ 0.86
CHMP1A-206ENST00000549139 GPTP24298 496 aa20.4■□□□□ 0.86
CHMP1A-206ENST00000549139 ZNF34Q8IZ26 560 aa20.4■□□□□ 0.86
CHMP1A-206ENST00000549139 HHIPL1Q96JK4 782 aa20.4■□□□□ 0.86
CHMP1A-206ENST00000549139 PGAP2Q9UHJ9 254 aa20.4■□□□□ 0.86
CHMP1A-206ENST00000549139 PPIP5K2O43314 1243 aa20.39■□□□□ 0.85
CHMP1A-206ENST00000549139 AOC3Q16853 763 aa20.39■□□□□ 0.85
CHMP1A-206ENST00000549139 VPS33BQ9H267 617 aa20.39■□□□□ 0.85
CHMP1A-206ENST00000549139 MBIPQ9NS73 344 aa20.39■□□□□ 0.85
CHMP1A-206ENST00000549139 TCERG1O14776 1098 aaKnown RBP20.38■□□□□ 0.85
CHMP1A-206ENST00000549139 CA12O43570 354 aa20.38■□□□□ 0.85
CHMP1A-206ENST00000549139 CXCL9Q07325 125 aa20.38■□□□□ 0.85
CHMP1A-206ENST00000549139 MCOLN1Q9GZU1 580 aa20.38■□□□□ 0.85
CHMP1A-206ENST00000549139 TNRC18O15417 2968 aaPredicted RBP20.38■□□□□ 0.85
CHMP1A-206ENST00000549139 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
CHMP1A-206ENST00000549139 CELF2O95319 508 aaKnown RBP20.37■□□□□ 0.85
CHMP1A-206ENST00000549139 KIF6Q6ZMV9 814 aa20.37■□□□□ 0.85
CHMP1A-206ENST00000549139 RTFDC1Q9BY42 306 aaPredicted RBP20.37■□□□□ 0.85
CHMP1A-206ENST00000549139 GLIS2Q9BZE0 524 aaPredicted RBP20.37■□□□□ 0.85
CHMP1A-206ENST00000549139 ZBTB3Q9H5J0 574 aa20.37■□□□□ 0.85
CHMP1A-206ENST00000549139 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
CHMP1A-206ENST00000549139 HOXB7P09629 217 aa20.36■□□□□ 0.85
CHMP1A-206ENST00000549139 GMPSP49915 693 aaPredicted RBP20.36■□□□□ 0.85
CHMP1A-206ENST00000549139 BRPF1P55201 1214 aaPredicted RBP20.36■□□□□ 0.85
CHMP1A-206ENST00000549139 ZNRF3Q9ULT6 936 aa20.36■□□□□ 0.85
CHMP1A-206ENST00000549139 IL16Q14005 1332 aa20.35■□□□□ 0.85
CHMP1A-206ENST00000549139 EIF2S2P20042 333 aaKnown RBP20.35■□□□□ 0.85
CHMP1A-206ENST00000549139 HIRAP54198 1017 aaPredicted RBP20.35■□□□□ 0.85
CHMP1A-206ENST00000549139 GIGYF2Q6Y7W6 1299 aaKnown RBP20.35■□□□□ 0.85
CHMP1A-206ENST00000549139 WDR63Q8IWG1 891 aa20.35■□□□□ 0.85
CHMP1A-206ENST00000549139 MYL6BP14649 208 aa20.34■□□□□ 0.85
CHMP1A-206ENST00000549139 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
CHMP1A-206ENST00000549139 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
CHMP1A-206ENST00000549139 MIER1Q8N108 512 aa20.34■□□□□ 0.85
CHMP1A-206ENST00000549139 ZC3H15Q8WU90 426 aaKnown RBP20.34■□□□□ 0.85
CHMP1A-206ENST00000549139 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
CHMP1A-206ENST00000549139 ABCC4O15439 1325 aa20.33■□□□□ 0.85
CHMP1A-206ENST00000549139 CDHR2Q9BYE9 1310 aa20.33■□□□□ 0.85
CHMP1A-206ENST00000549139 LRP10Q7Z4F1 713 aa20.33■□□□□ 0.85
CHMP1A-206ENST00000549139 NLRP3Q96P20 1036 aa20.33■□□□□ 0.85
CHMP1A-206ENST00000549139 PCDH10Q9P2E7 1040 aa20.33■□□□□ 0.85
CHMP1A-206ENST00000549139 DUSP27Q5VZP5 1158 aa20.32■□□□□ 0.84
CHMP1A-206ENST00000549139 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
CHMP1A-206ENST00000549139 ZIC5Q96T25 663 aa20.32■□□□□ 0.84
CHMP1A-206ENST00000549139 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
CHMP1A-206ENST00000549139 PDIA6Q15084 440 aa20.31■□□□□ 0.84
CHMP1A-206ENST00000549139 PARP10Q53GL7 1025 aa20.31■□□□□ 0.84
CHMP1A-206ENST00000549139 PPP1R42Q7Z4L9 355 aa20.31■□□□□ 0.84
CHMP1A-206ENST00000549139 SUPT20HQ8NEM7 779 aa20.31■□□□□ 0.84
CHMP1A-206ENST00000549139 TRPM4Q8TD43 1214 aa20.31■□□□□ 0.84
CHMP1A-206ENST00000549139 CDC37L1Q7L3B6 337 aa20.3■□□□□ 0.84
CHMP1A-206ENST00000549139 LAMB2P55268 1798 aa20.29■□□□□ 0.84
CHMP1A-206ENST00000549139 DGKZQ13574 1117 aa20.29■□□□□ 0.84
CHMP1A-206ENST00000549139 SP8Q8IXZ3 490 aa20.29■□□□□ 0.84
CHMP1A-206ENST00000549139 UTP14AQ9BVJ6 771 aaKnown RBP20.29■□□□□ 0.84
CHMP1A-206ENST00000549139 TMX4Q9H1E5 349 aaPredicted RBP20.29■□□□□ 0.84
CHMP1A-206ENST00000549139 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
CHMP1A-206ENST00000549139 SHTN1A0MZ66 631 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 YDJCA8MPS7 323 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 BBOX1O75936 387 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 RAD17O75943 681 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 NOGQ13253 232 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 HDGFL1Q5TGJ6 251 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 DPP8Q6V1X1 898 aaPredicted RBP20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 C8orf58Q8NAV2 365 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 ZNF408Q9H9D4 720 aa20.28■□□□□ 0.84
CHMP1A-206ENST00000549139 POLR2AP24928 1970 aaKnown RBP20.27■□□□□ 0.84
CHMP1A-206ENST00000549139 TNIP1Q15025 636 aa20.27■□□□□ 0.84
CHMP1A-206ENST00000549139 MPNDQ8N594 471 aa20.27■□□□□ 0.84
CHMP1A-206ENST00000549139 TSR2Q969E8 191 aaKnown RBP20.27■□□□□ 0.84
CHMP1A-206ENST00000549139 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.84
CHMP1A-206ENST00000549139 CHMP4AQ9BY43 222 aa20.27■□□□□ 0.84
CHMP1A-206ENST00000549139 CNOT7Q9UIV1 285 aaKnown RBP20.27■□□□□ 0.84
CHMP1A-206ENST00000549139 CACNA1FO60840 1977 aa20.26■□□□□ 0.83
CHMP1A-206ENST00000549139 DUOX1Q9NRD9 1551 aa20.26■□□□□ 0.83
CHMP1A-206ENST00000549139 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-206ENST00000549139 PROSER3Q2NL68 480 aa20.26■□□□□ 0.83
CHMP1A-206ENST00000549139 DLK2Q6UY11 383 aa20.26■□□□□ 0.83
CHMP1A-206ENST00000549139 DBF4Q9UBU7 674 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-206ENST00000549139 TAF1P21675 1872 aa20.26■□□□□ 0.83
CHMP1A-206ENST00000549139 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
CHMP1A-206ENST00000549139 ANXA1P04083 346 aa20.25■□□□□ 0.83
CHMP1A-206ENST00000549139 HUNKP57058 714 aa20.25■□□□□ 0.83
CHMP1A-206ENST00000549139 USP48Q86UV5 1035 aa20.25■□□□□ 0.83
CHMP1A-206ENST00000549139 FAM155AB1AL88 458 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-206ENST00000549139 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
CHMP1A-206ENST00000549139 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
CHMP1A-206ENST00000549139 H7C1D1 291 aa20.23■□□□□ 0.83
CHMP1A-206ENST00000549139 HCLS1P14317 486 aaPredicted RBP20.23■□□□□ 0.83
CHMP1A-206ENST00000549139 GOLGA2Q08379 1002 aa20.23■□□□□ 0.83
CHMP1A-206ENST00000549139 COPS6Q7L5N1 327 aa20.23■□□□□ 0.83
CHMP1A-206ENST00000549139 MICALL2Q8IY33 904 aa20.23■□□□□ 0.83
CHMP1A-206ENST00000549139 DPF2Q92785 391 aa20.23■□□□□ 0.83
CHMP1A-206ENST00000549139 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
CHMP1A-206ENST00000549139 LRRC37AA6NMS7 1700 aa20.22■□□□□ 0.83
CHMP1A-206ENST00000549139 GRAPQ13588 217 aa20.22■□□□□ 0.83
CHMP1A-206ENST00000549139 CCDC30Q5VVM6 783 aa20.22■□□□□ 0.83
CHMP1A-206ENST00000549139 NLRP10Q86W26 655 aa20.22■□□□□ 0.83
CHMP1A-206ENST00000549139 GRAPLQ8TC17 118 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms