RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 MAP3K6O95382 1288 aa8.68□□□□□ -1.02
CCDC38-206ENST00000548771 ARSDP51689 593 aa8.68□□□□□ -1.02
CCDC38-206ENST00000548771 ZFATQ9P243 1243 aa8.68□□□□□ -1.02
CCDC38-206ENST00000548771 SLC6A14Q9UN76 642 aa8.68□□□□□ -1.02
CCDC38-206ENST00000548771 GTF3C3Q9Y5Q9 886 aa8.68□□□□□ -1.02
CCDC38-206ENST00000548771 SPDYE3A6NKU9 549 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 EGFRP00533 1210 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 EPB42P16452 691 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 IFT43Q96FT9 208 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 KRTAP9-9Q9BYP9 154 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 KRTAP9-4Q9BYQ2 154 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 DNAJB12Q9NXW2 375 aaKnown RBP8.67□□□□□ -1.02
CCDC38-206ENST00000548771 SLAIN2Q9P270 581 aa8.67□□□□□ -1.02
CCDC38-206ENST00000548771 ZBTB42B2RXF5 422 aa8.66□□□□□ -1.02
CCDC38-206ENST00000548771 PRMT3O60678 531 aa8.66□□□□□ -1.02
CCDC38-206ENST00000548771 NFKB1P19838 968 aa8.66□□□□□ -1.02
CCDC38-206ENST00000548771 TRIM28Q13263 835 aaKnown RBP8.66□□□□□ -1.02
CCDC38-206ENST00000548771 VTI1AQ96AJ9 217 aa8.66□□□□□ -1.02
CCDC38-206ENST00000548771 UBE2OQ9C0C9 1292 aaKnown RBP8.66□□□□□ -1.02
CCDC38-206ENST00000548771 SAP130Q9H0E3 1048 aa8.66□□□□□ -1.02
CCDC38-206ENST00000548771 CXXC1Q9P0U4 656 aaPredicted RBP8.66□□□□□ -1.02
CCDC38-206ENST00000548771 NAGPAQ9UK23 515 aa8.66□□□□□ -1.02
CCDC38-206ENST00000548771 TARSP26639 723 aaKnown RBP8.65□□□□□ -1.02
CCDC38-206ENST00000548771 FAM26DQ5JW98 314 aa8.65□□□□□ -1.02
CCDC38-206ENST00000548771 CAPN12Q6ZSI9 719 aa8.65□□□□□ -1.02
CCDC38-206ENST00000548771 CLP1Q92989 425 aaKnown RBP8.65□□□□□ -1.02
CCDC38-206ENST00000548771 PBXIP1Q96AQ6 731 aa8.65□□□□□ -1.02
CCDC38-206ENST00000548771 SERPINA10Q9UK55 444 aa8.65□□□□□ -1.02
CCDC38-206ENST00000548771 TREML1Q86YW5 311 aa8.64□□□□□ -1.03
CCDC38-206ENST00000548771 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
CCDC38-206ENST00000548771 TRPM4Q8TD43 1214 aa8.64□□□□□ -1.03
CCDC38-206ENST00000548771 RTCBQ9Y3I0 505 aaKnown RBP8.64□□□□□ -1.03
CCDC38-206ENST00000548771 KCNMB2Q9Y691 235 aa8.64□□□□□ -1.03
CCDC38-206ENST00000548771 LILRB5O75023 590 aa8.63□□□□□ -1.03
CCDC38-206ENST00000548771 ETFBKMTQ8IXQ9 262 aa8.63□□□□□ -1.03
CCDC38-206ENST00000548771 PNMA5Q96PV4 448 aa8.63□□□□□ -1.03
CCDC38-206ENST00000548771 USP20Q9Y2K6 914 aa8.63□□□□□ -1.03
CCDC38-206ENST00000548771 TNFRSF10BO14763 440 aa8.62□□□□□ -1.03
CCDC38-206ENST00000548771 SASH3O75995 380 aa8.62□□□□□ -1.03
CCDC38-206ENST00000548771 SELPP16109 830 aa8.62□□□□□ -1.03
CCDC38-206ENST00000548771 AFF1P51825 1210 aaKnown RBP8.62□□□□□ -1.03
CCDC38-206ENST00000548771 GRIK5Q16478 980 aa8.62□□□□□ -1.03
CCDC38-206ENST00000548771 C16orf46Q6P387 395 aa8.62□□□□□ -1.03
CCDC38-206ENST00000548771 HYAL3O43820 417 aaPredicted RBP8.61□□□□□ -1.03
CCDC38-206ENST00000548771 MBTPS1Q14703 1052 aa8.61□□□□□ -1.03
CCDC38-206ENST00000548771 TRAPPC3LQ5T215 181 aa8.61□□□□□ -1.03
CCDC38-206ENST00000548771 PSAPL1Q6NUJ1 521 aa8.61□□□□□ -1.03
CCDC38-206ENST00000548771 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
CCDC38-206ENST00000548771 DHX32Q7L7V1 743 aaKnown RBP8.61□□□□□ -1.03
CCDC38-206ENST00000548771 TTC9Q92623 222 aa8.61□□□□□ -1.03
CCDC38-206ENST00000548771 NACC1Q96RE7 527 aa8.61□□□□□ -1.03
CCDC38-206ENST00000548771 IGFLR1Q9H665 355 aa8.61□□□□□ -1.03
CCDC38-206ENST00000548771 ARID3CA6NKF2 412 aa8.6□□□□□ -1.03
CCDC38-206ENST00000548771 BRD2P25440 801 aaKnown RBP8.6□□□□□ -1.03
CCDC38-206ENST00000548771 GPLD1P80108 840 aa8.6□□□□□ -1.03
CCDC38-206ENST00000548771 TBC1D8BQ0IIM8 1120 aa8.6□□□□□ -1.03
CCDC38-206ENST00000548771 ADGRE1Q14246 886 aa8.6□□□□□ -1.03
CCDC38-206ENST00000548771 PCSK7Q16549 785 aa8.6□□□□□ -1.03
CCDC38-206ENST00000548771 NUDT8Q8WV74 236 aa8.6□□□□□ -1.03
CCDC38-206ENST00000548771 CCDC97Q96F63 343 aaPredicted RBP8.6□□□□□ -1.03
CCDC38-206ENST00000548771 LPIN3Q9BQK8 851 aa8.6□□□□□ -1.03
CCDC38-206ENST00000548771 FRRS1LQ9P0K9 344 aa8.6□□□□□ -1.03
CCDC38-206ENST00000548771 A0A0A0MRY4 1105 aa8.59□□□□□ -1.03
CCDC38-206ENST00000548771 LRP8Q14114 963 aa8.59□□□□□ -1.03
CCDC38-206ENST00000548771 KRT25Q7Z3Z0 450 aa8.59□□□□□ -1.03
CCDC38-206ENST00000548771 JPH1Q9HDC5 661 aaPredicted RBP8.59□□□□□ -1.03
CCDC38-206ENST00000548771 TLR7Q9NYK1 1049 aaKnown RBP8.59□□□□□ -1.03
CCDC38-206ENST00000548771 PTCD1O75127 700 aaKnown RBP8.58□□□□□ -1.04
CCDC38-206ENST00000548771 RARAP10276 462 aa8.58□□□□□ -1.04
CCDC38-206ENST00000548771 HOXD8P13378 290 aaPredicted RBP8.58□□□□□ -1.04
CCDC38-206ENST00000548771 NRLP54845 237 aa8.58□□□□□ -1.04
CCDC38-206ENST00000548771 PLAURQ03405 335 aa8.58□□□□□ -1.04
CCDC38-206ENST00000548771 PERM1Q5SV97 790 aa8.58□□□□□ -1.04
CCDC38-206ENST00000548771 FAM35AQ86V20 835 aa8.58□□□□□ -1.04
CCDC38-206ENST00000548771 RGL4Q8IZJ4 473 aa8.58□□□□□ -1.04
CCDC38-206ENST00000548771 CMTR1Q8N1G2 835 aaKnown RBP8.58□□□□□ -1.04
CCDC38-206ENST00000548771 XYLBO75191 536 aa8.57□□□□□ -1.04
CCDC38-206ENST00000548771 RGS9O75916 674 aaPredicted RBP8.57□□□□□ -1.04
CCDC38-206ENST00000548771 H2AFB1P0C5Y9 115 aa8.57□□□□□ -1.04
CCDC38-206ENST00000548771 H2AFB2P0C5Z0 115 aa8.57□□□□□ -1.04
CCDC38-206ENST00000548771 MKNK1Q9BUB5 465 aa8.57□□□□□ -1.04
CCDC38-206ENST00000548771 C1orf115Q9H7X2 142 aa8.57□□□□□ -1.04
CCDC38-206ENST00000548771 C9orf172C9J069 976 aa8.56□□□□□ -1.04
CCDC38-206ENST00000548771 MMP20O60882 483 aa8.56□□□□□ -1.04
CCDC38-206ENST00000548771 CPB1P15086 417 aa8.56□□□□□ -1.04
CCDC38-206ENST00000548771 NAA30Q147X3 362 aaPredicted RBP8.56□□□□□ -1.04
CCDC38-206ENST00000548771 TRIP4Q15650 581 aaPredicted RBP8.56□□□□□ -1.04
CCDC38-206ENST00000548771 TP53INP1Q96A56 240 aa8.56□□□□□ -1.04
CCDC38-206ENST00000548771 ZBTB39O15060 712 aa8.55□□□□□ -1.04
CCDC38-206ENST00000548771 ELNP15502 786 aa8.55□□□□□ -1.04
CCDC38-206ENST00000548771 SOX18P35713 384 aa8.55□□□□□ -1.04
CCDC38-206ENST00000548771 MSL1Q68DK7 614 aa8.55□□□□□ -1.04
CCDC38-206ENST00000548771 TXNRD3Q86VQ6 643 aa8.55□□□□□ -1.04
CCDC38-206ENST00000548771 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
CCDC38-206ENST00000548771 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
CCDC38-206ENST00000548771 MLLT1Q03111 559 aaPredicted RBP8.54□□□□□ -1.04
CCDC38-206ENST00000548771 DMRTC2Q8IXT2 367 aaPredicted RBP8.54□□□□□ -1.04
CCDC38-206ENST00000548771 FMR1NBQ8N0W7 255 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms