RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 AOC3Q16853 763 aa17.94■□□□□ 0.46
CCDC59-202ENST00000547758 KIF6Q6ZMV9 814 aa17.94■□□□□ 0.46
CCDC59-202ENST00000547758 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
CCDC59-202ENST00000547758 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
CCDC59-202ENST00000547758 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCDC59-202ENST00000547758 HHIPL1Q96JK4 782 aa17.93■□□□□ 0.46
CCDC59-202ENST00000547758 ANKRD36CQ5JPF3 1778 aa17.93■□□□□ 0.46
CCDC59-202ENST00000547758 POLR2AP24928 1970 aaKnown RBP17.93■□□□□ 0.46
CCDC59-202ENST00000547758 SUSD4Q5VX71 490 aa17.92■□□□□ 0.46
CCDC59-202ENST00000547758 TTLL7Q6ZT98 887 aa17.92■□□□□ 0.46
CCDC59-202ENST00000547758 GLIS2Q9BZE0 524 aaPredicted RBP17.92■□□□□ 0.46
CCDC59-202ENST00000547758 VPS33BQ9H267 617 aa17.92■□□□□ 0.46
CCDC59-202ENST00000547758 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
CCDC59-202ENST00000547758 NTSR2O95665 410 aa17.91■□□□□ 0.46
CCDC59-202ENST00000547758 CXCL9Q07325 125 aa17.91■□□□□ 0.46
CCDC59-202ENST00000547758 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
CCDC59-202ENST00000547758 TMX4Q9H1E5 349 aaPredicted RBP17.91■□□□□ 0.46
CCDC59-202ENST00000547758 ZBTB3Q9H5J0 574 aa17.91■□□□□ 0.46
CCDC59-202ENST00000547758 ZNRF3Q9ULT6 936 aa17.91■□□□□ 0.46
CCDC59-202ENST00000547758 RRP7AQ9Y3A4 280 aaKnown RBP17.91■□□□□ 0.46
CCDC59-202ENST00000547758 AKAP11Q9UKA4 1901 aa17.9■□□□□ 0.46
CCDC59-202ENST00000547758 GMPSP49915 693 aaPredicted RBP17.9■□□□□ 0.46
CCDC59-202ENST00000547758 DGKZQ13574 1117 aa17.9■□□□□ 0.46
CCDC59-202ENST00000547758 ATP6V0A2Q9Y487 856 aa17.9■□□□□ 0.46
CCDC59-202ENST00000547758 CDHR2Q9BYE9 1310 aa17.9■□□□□ 0.46
CCDC59-202ENST00000547758 TAF1P21675 1872 aa17.89■□□□□ 0.45
CCDC59-202ENST00000547758 MYL6BP14649 208 aa17.89■□□□□ 0.45
CCDC59-202ENST00000547758 CIAPIN1Q6FI81 312 aa17.89■□□□□ 0.45
CCDC59-202ENST00000547758 ZNF34Q8IZ26 560 aa17.89■□□□□ 0.45
CCDC59-202ENST00000547758 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
CCDC59-202ENST00000547758 ZNF408Q9H9D4 720 aa17.89■□□□□ 0.45
CCDC59-202ENST00000547758 PGAP2Q9UHJ9 254 aa17.89■□□□□ 0.45
CCDC59-202ENST00000547758 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
CCDC59-202ENST00000547758 ZC3H15Q8WU90 426 aaKnown RBP17.88■□□□□ 0.45
CCDC59-202ENST00000547758 NLRP3Q96P20 1036 aa17.88■□□□□ 0.45
CCDC59-202ENST00000547758 RTFDC1Q9BY42 306 aaPredicted RBP17.88■□□□□ 0.45
CCDC59-202ENST00000547758 GIGYF2Q6Y7W6 1299 aaKnown RBP17.87■□□□□ 0.45
CCDC59-202ENST00000547758 PNISRQ8TF01 805 aaKnown RBP17.87■□□□□ 0.45
CCDC59-202ENST00000547758 BCL2L13Q9BXK5 485 aa17.87■□□□□ 0.45
CCDC59-202ENST00000547758 ABCC4O15439 1325 aa17.87■□□□□ 0.45
CCDC59-202ENST00000547758 HIRAP54198 1017 aaPredicted RBP17.86■□□□□ 0.45
CCDC59-202ENST00000547758 EIF4A1P60842 406 aaKnown RBP17.86■□□□□ 0.45
CCDC59-202ENST00000547758 NOGQ13253 232 aa17.86■□□□□ 0.45
CCDC59-202ENST00000547758 PARP10Q53GL7 1025 aa17.86■□□□□ 0.45
CCDC59-202ENST00000547758 CDC37L1Q7L3B6 337 aa17.86■□□□□ 0.45
CCDC59-202ENST00000547758 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
CCDC59-202ENST00000547758 TRPM4Q8TD43 1214 aa17.86■□□□□ 0.45
CCDC59-202ENST00000547758 LRRC37AA6NMS7 1700 aa17.85■□□□□ 0.45
CCDC59-202ENST00000547758 KIAA2012Q0VF49 1180 aa17.85■□□□□ 0.45
CCDC59-202ENST00000547758 TNIP1Q15025 636 aa17.85■□□□□ 0.45
CCDC59-202ENST00000547758 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
CCDC59-202ENST00000547758 RAD17O75943 681 aa17.84■□□□□ 0.45
CCDC59-202ENST00000547758 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
CCDC59-202ENST00000547758 ZIC5Q96T25 663 aa17.84■□□□□ 0.45
CCDC59-202ENST00000547758 DUOX1Q9NRD9 1551 aa17.83■□□□□ 0.45
CCDC59-202ENST00000547758 ERBB4Q15303 1308 aa17.83■□□□□ 0.44
CCDC59-202ENST00000547758 HUNKP57058 714 aa17.83■□□□□ 0.44
CCDC59-202ENST00000547758 SLC10A5Q5PT55 438 aa17.83■□□□□ 0.44
CCDC59-202ENST00000547758 SP8Q8IXZ3 490 aa17.83■□□□□ 0.44
CCDC59-202ENST00000547758 MPNDQ8N594 471 aa17.83■□□□□ 0.44
CCDC59-202ENST00000547758 UTP14AQ9BVJ6 771 aaKnown RBP17.83■□□□□ 0.44
CCDC59-202ENST00000547758 CNOT7Q9UIV1 285 aaKnown RBP17.83■□□□□ 0.44
CCDC59-202ENST00000547758 DDX60Q8IY21 1712 aaKnown RBP17.82■□□□□ 0.44
CCDC59-202ENST00000547758 SHTN1A0MZ66 631 aa17.82■□□□□ 0.44
CCDC59-202ENST00000547758 BBOX1O75936 387 aa17.82■□□□□ 0.44
CCDC59-202ENST00000547758 H7C1D1 291 aa17.81■□□□□ 0.44
CCDC59-202ENST00000547758 USP48Q86UV5 1035 aa17.81■□□□□ 0.44
CCDC59-202ENST00000547758 MICALL2Q8IY33 904 aa17.81■□□□□ 0.44
CCDC59-202ENST00000547758 YDJCA8MPS7 323 aa17.8■□□□□ 0.44
CCDC59-202ENST00000547758 NEFMP07197 916 aa17.8■□□□□ 0.44
CCDC59-202ENST00000547758 SAGE1Q9NXZ1 904 aa17.8■□□□□ 0.44
CCDC59-202ENST00000547758 FAM155AB1AL88 458 aaPredicted RBP17.79■□□□□ 0.44
CCDC59-202ENST00000547758 PRR29P0C7W0 189 aa17.79■□□□□ 0.44
CCDC59-202ENST00000547758 RGMBQ6NW40 437 aa17.79■□□□□ 0.44
CCDC59-202ENST00000547758 LRP10Q7Z4F1 713 aa17.79■□□□□ 0.44
CCDC59-202ENST00000547758 THUMPD2Q9BTF0 503 aaKnown RBP17.79■□□□□ 0.44
CCDC59-202ENST00000547758 SOX10P56693 466 aa17.78■□□□□ 0.44
CCDC59-202ENST00000547758 GRAPQ13588 217 aa17.78■□□□□ 0.44
CCDC59-202ENST00000547758 DLK2Q6UY11 383 aa17.78■□□□□ 0.44
CCDC59-202ENST00000547758 DDX46Q7L014 1031 aaKnown RBP17.78■□□□□ 0.44
CCDC59-202ENST00000547758 GRAPLQ8TC17 118 aaPredicted RBP17.78■□□□□ 0.44
CCDC59-202ENST00000547758 HCLS1P14317 486 aaPredicted RBP17.77■□□□□ 0.44
CCDC59-202ENST00000547758 PDIA6Q15084 440 aa17.77■□□□□ 0.44
CCDC59-202ENST00000547758 SAMD7Q7Z3H4 446 aa17.77■□□□□ 0.44
CCDC59-202ENST00000547758 KRT26Q7Z3Y9 468 aa17.77■□□□□ 0.44
CCDC59-202ENST00000547758 DPF2Q92785 391 aa17.77■□□□□ 0.44
CCDC59-202ENST00000547758 GBA2Q9HCG7 927 aaPredicted RBP17.77■□□□□ 0.44
CCDC59-202ENST00000547758 NFE2L2Q16236 605 aa17.76■□□□□ 0.43
CCDC59-202ENST00000547758 C2orf69Q8N8R5 385 aa17.76■□□□□ 0.43
CCDC59-202ENST00000547758 CCDC102AQ96A19 550 aa17.76■□□□□ 0.43
CCDC59-202ENST00000547758 SCN9AQ15858 1988 aa17.76■□□□□ 0.43
CCDC59-202ENST00000547758 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
CCDC59-202ENST00000547758 PSMD14O00487 310 aa17.75■□□□□ 0.43
CCDC59-202ENST00000547758 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
CCDC59-202ENST00000547758 KIF23Q02241 960 aaPredicted RBP17.75■□□□□ 0.43
CCDC59-202ENST00000547758 PROSER3Q2NL68 480 aa17.75■□□□□ 0.43
CCDC59-202ENST00000547758 TBC1D10BQ4KMP7 808 aaPredicted RBP17.75■□□□□ 0.43
CCDC59-202ENST00000547758 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
CCDC59-202ENST00000547758 TMC4Q7Z404 712 aa17.75■□□□□ 0.43
CCDC59-202ENST00000547758 NLRP10Q86W26 655 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms