RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 RXRBP28702 533 aa9.76□□□□□ -0.85
TSPAN8-203ENST00000546561 BEND3Q5T5X7 828 aa9.76□□□□□ -0.85
TSPAN8-203ENST00000546561 RPAP2Q8IXW5 612 aaPredicted RBP9.76□□□□□ -0.85
TSPAN8-203ENST00000546561 LINS1Q8NG48 757 aa9.76□□□□□ -0.85
TSPAN8-203ENST00000546561 PLBD2Q8NHP8 589 aa9.76□□□□□ -0.85
TSPAN8-203ENST00000546561 NUP98P52948 1817 aa9.76□□□□□ -0.85
TSPAN8-203ENST00000546561 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 A1BGP04217 495 aa9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 CYP19A1P11511 503 aaPredicted RBP9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 IL6STP40189 918 aaPredicted RBP9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 LRP10Q7Z4F1 713 aa9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 MEIS3Q99687 375 aa9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 LARP6Q9BRS8 491 aaKnown RBP9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 METTL22Q9BUU2 404 aaPredicted RBP9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 CRISPLD2Q9H0B8 497 aa9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 C9orf78Q9NZ63 289 aaPredicted RBP9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 VPS9D1Q9Y2B5 631 aa9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 PCDHB15Q9Y5E8 787 aa9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 RGPD3A6NKT7 1758 aaPredicted RBP9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 RGPD4Q7Z3J3 1758 aa9.75□□□□□ -0.85
TSPAN8-203ENST00000546561 MYH14Q7Z406 1995 aaKnown RBP9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 GOLGA8CPA6NN73 597 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 NBPF26B4DH59 902 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 KCNQ2O43526 872 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 HSP90AB3PQ58FF7 597 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 NBPF10Q6P3W6 841 aaKnown RBP9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 NBPF15Q8N660 670 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 GCC1Q96CN9 775 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 MYD88Q99836 296 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 C1orf115Q9H7X2 142 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 CCDC87Q9NVE4 849 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 ZNF330Q9Y3S2 320 aaPredicted RBP9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 SCN7AQ01118 1682 aa9.74□□□□□ -0.85
TSPAN8-203ENST00000546561 A0A087WZG4 1122 aa9.73□□□□□ -0.85
TSPAN8-203ENST00000546561 PIP4K2AP48426 406 aaPredicted RBP9.73□□□□□ -0.85
TSPAN8-203ENST00000546561 ANKRD44Q8N8A2 993 aa9.73□□□□□ -0.85
TSPAN8-203ENST00000546561 SLC4A9Q96Q91 983 aa9.73□□□□□ -0.85
TSPAN8-203ENST00000546561 KCNK17Q96T54 332 aa9.73□□□□□ -0.85
TSPAN8-203ENST00000546561 ZBTB1Q9Y2K1 713 aa9.73□□□□□ -0.85
TSPAN8-203ENST00000546561 CNTNAP4Q9C0A0 1308 aa9.73□□□□□ -0.85
TSPAN8-203ENST00000546561 C4BP0C0L5 1744 aa9.73□□□□□ -0.85
TSPAN8-203ENST00000546561 MYH3P11055 1940 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 NEURL1BA8MQ27 555 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 GRM8O00222 908 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 LCE2BO14633 110 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 IGHDP01880 384 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 CRKLP46109 303 aaKnown RBP9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 DSG2Q14126 1118 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 CEP85Q6P2H3 762 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 USP44Q9H0E7 712 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 CCNL1Q9UK58 526 aaPredicted RBP9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 MAP3K15Q6ZN16 1313 aa9.72□□□□□ -0.85
TSPAN8-203ENST00000546561 TNS1Q9HBL0 1735 aaKnown RBP9.71□□□□□ -0.85
TSPAN8-203ENST00000546561 ERVV-1B6SEH8 477 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 FOXK1P85037 733 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 ITPK1Q13572 414 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 CWF19L2Q2TBE0 894 aaKnown RBP9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 FAM182BQ5T319 152 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 TTLL7Q6ZT98 887 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 SMC5Q8IY18 1101 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 PLPP6Q8IY26 295 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 CCDC191Q8NCU4 936 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 WNT2BQ93097 391 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 ARXQ96QS3 562 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 CWC25Q9NXE8 425 aaPredicted RBP9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 ZNF652Q9Y2D9 606 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 LRRFIP2Q9Y608 721 aaKnown RBP9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 UTYO14607 1347 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 COL15A1P39059 1388 aa9.71□□□□□ -0.86
TSPAN8-203ENST00000546561 GCKRQ14397 625 aa9.7□□□□□ -0.86
TSPAN8-203ENST00000546561 SLC27A3Q5K4L6 730 aa9.7□□□□□ -0.86
TSPAN8-203ENST00000546561 PPP1R15BQ5SWA1 713 aa9.7□□□□□ -0.86
TSPAN8-203ENST00000546561 RC3H1Q5TC82 1133 aaKnown RBP9.7□□□□□ -0.86
TSPAN8-203ENST00000546561 GIGYF2Q6Y7W6 1299 aaKnown RBP9.7□□□□□ -0.86
TSPAN8-203ENST00000546561 DZIP3Q86Y13 1208 aaKnown RBP9.7□□□□□ -0.86
TSPAN8-203ENST00000546561 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
TSPAN8-203ENST00000546561 LAMB2P55268 1798 aa9.7□□□□□ -0.86
TSPAN8-203ENST00000546561 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 IGKV5-2P06315 115 aa9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 NBPF7P0C2Y1 421 aaPredicted RBP9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 ATP8B2P98198 1209 aa9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 TCIRG1Q13488 830 aa9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 UBR3Q6ZT12 1888 aa9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 LINC00116Q8NCU8 138 aa9.69□□□□□ -0.86
TSPAN8-203ENST00000546561 TRIM37O94972 964 aa9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 TRIM28Q13263 835 aaKnown RBP9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 HSP90AB4PQ58FF6 505 aa9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 AK7Q96M32 723 aa9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 ISCA1Q9BUE6 129 aa9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 SLC4A5Q9BY07 1137 aa9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 DCTPP1Q9H773 170 aa9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 WDR70Q9NW82 654 aa9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 PDZRN3Q9UPQ7 1066 aa9.68□□□□□ -0.86
TSPAN8-203ENST00000546561 ATP5J2-PTCD1G3V325 749 aa9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 SRGAP3O43295 1099 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms