RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 KIF1BPQ96EK5 621 aa9.28□□□□□ -0.92
UBR1-202ENST00000546274 UPF3BQ9BZI7 483 aaKnown RBP9.28□□□□□ -0.92
UBR1-202ENST00000546274 IL1RAPL2Q9NP60 686 aa9.28□□□□□ -0.92
UBR1-202ENST00000546274 ZCCHC17Q9NP64 241 aaKnown RBP9.28□□□□□ -0.92
UBR1-202ENST00000546274 RRP15Q9Y3B9 282 aaKnown RBP9.28□□□□□ -0.92
UBR1-202ENST00000546274 PHRF1Q9P1Y6 1649 aaKnown RBP9.28□□□□□ -0.92
UBR1-202ENST00000546274 NFAT5O94916 1531 aa9.28□□□□□ -0.92
UBR1-202ENST00000546274 TAF7Q15545 349 aaPredicted RBP9.28□□□□□ -0.92
UBR1-202ENST00000546274 NOL8Q76FK4 1167 aaKnown RBP9.28□□□□□ -0.92
UBR1-202ENST00000546274 PACS2Q86VP3 889 aa9.28□□□□□ -0.92
UBR1-202ENST00000546274 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
UBR1-202ENST00000546274 SMARCE1Q969G3 411 aa9.28□□□□□ -0.92
UBR1-202ENST00000546274 BABAM1Q9NWV8 329 aa9.28□□□□□ -0.92
UBR1-202ENST00000546274 AP5Z1O43299 807 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 HSP90AB3PQ58FF7 597 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 DONSONQ9NYP3 566 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 PAXBP1Q9Y5B6 917 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 ANKRD65E5RJM6 399 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 UBTFL1P0CB47 393 aaPredicted RBP9.27□□□□□ -0.93
UBR1-202ENST00000546274 MCCP23508 829 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 NLRP6P59044 892 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 NUTM2GQ5VZR2 741 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 CCDC186Q7Z3E2 898 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
UBR1-202ENST00000546274 SIPA1L3O60292 1781 aaPredicted RBP9.27□□□□□ -0.93
UBR1-202ENST00000546274 EPB41L2O43491 1005 aaKnown RBP9.26□□□□□ -0.93
UBR1-202ENST00000546274 CEP135Q66GS9 1140 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 PPP1R42Q7Z4L9 355 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
UBR1-202ENST00000546274 MAP4K4O95819 1239 aaPredicted RBP9.26□□□□□ -0.93
UBR1-202ENST00000546274 ATP2B1P20020 1258 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 SEMA3FQ13275 785 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 MUM1L1Q5H9M0 696 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 SRLQ86TD4 932 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 TTC14Q96N46 770 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 RAD50Q92878 1312 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 UBAP1LF5GYI3 381 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 NBPF7P0C2Y1 421 aaPredicted RBP9.26□□□□□ -0.93
UBR1-202ENST00000546274 CCDC91Q7Z6B0 441 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 PIAS4Q8N2W9 510 aaPredicted RBP9.26□□□□□ -0.93
UBR1-202ENST00000546274 USHBP1Q8N6Y0 703 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 RHPN1Q8TCX5 695 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 SGSM3Q96HU1 749 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 FAM53CQ9NYF3 392 aa9.26□□□□□ -0.93
UBR1-202ENST00000546274 SGSM2O43147 1006 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 GPS2Q13227 327 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 PPP2R5AQ15172 486 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 NOM1Q5C9Z4 860 aaKnown RBP9.25□□□□□ -0.93
UBR1-202ENST00000546274 HDGFL1Q5TGJ6 251 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 TTLL5Q6EMB2 1281 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 ILDR1Q86SU0 546 aaPredicted RBP9.25□□□□□ -0.93
UBR1-202ENST00000546274 LSG1Q9H089 658 aaKnown RBP9.25□□□□□ -0.93
UBR1-202ENST00000546274 RAB11FIP3O75154 756 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 TSGA10IPQ3SY00 556 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 SNX14Q9Y5W7 946 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 TPM3P06753 285 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 BEND3Q5T5X7 828 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 GIMAP6Q6P9H5 292 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 RASEFQ8IZ41 740 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 ATG3Q9NT62 314 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 NRBP1Q9UHY1 535 aa9.25□□□□□ -0.93
UBR1-202ENST00000546274 ADCY9O60503 1353 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 NPM3O75607 178 aaKnown RBP9.24□□□□□ -0.93
UBR1-202ENST00000546274 SURF6O75683 361 aaKnown RBP9.24□□□□□ -0.93
UBR1-202ENST00000546274 PLA2G4AP47712 749 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 LMAN1P49257 510 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 EIF4A1P60842 406 aaKnown RBP9.24□□□□□ -0.93
UBR1-202ENST00000546274 ERCC6LQ2NKX8 1250 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 USP48Q86UV5 1035 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
UBR1-202ENST00000546274 PNMA6AP0CW24 399 aaPredicted RBP9.24□□□□□ -0.93
UBR1-202ENST00000546274 MAP2K2P36507 400 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 TPM4P67936 248 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 MAP2K1Q02750 393 aaPredicted RBP9.24□□□□□ -0.93
UBR1-202ENST00000546274 TMEM87AQ8NBN3 555 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 LTV1Q96GA3 475 aaPredicted RBP9.24□□□□□ -0.93
UBR1-202ENST00000546274 LGR6Q9HBX8 967 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 FHOD1Q9Y613 1164 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 ADGRL3Q9HAR2 1447 aa9.24□□□□□ -0.93
UBR1-202ENST00000546274 SRGAP3O43295 1099 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 CHPF2Q9P2E5 772 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 ZBTB12Q9Y330 459 aaPredicted RBP9.23□□□□□ -0.93
UBR1-202ENST00000546274 KCNQ3O43525 872 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 BIRC2Q13490 618 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 LRCH2Q5VUJ6 765 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 RUFY3Q7L099 469 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 ANKRD20A12PQ8NF67 263 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 TRMT1Q9NXH9 659 aaKnown RBP9.23□□□□□ -0.93
UBR1-202ENST00000546274 SH3BP1Q9Y3L3 701 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 CAMTA1Q9Y6Y1 1673 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 WDR33Q9C0J8 1336 aaKnown RBP9.23□□□□□ -0.93
UBR1-202ENST00000546274 AK2P54819 239 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 ABTB2Q8N961 1025 aa9.23□□□□□ -0.93
UBR1-202ENST00000546274 PXDNQ92626 1479 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 ADAMTS7Q9UKP4 1686 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 ATP6V1AP38606 617 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 CLCN6P51797 869 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 NBPF6Q5VWK0 638 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 NBPF4Q96M43 638 aa9.22□□□□□ -0.93
UBR1-202ENST00000546274 C19orf44Q9H6X5 657 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms