RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 FOXO4P98177 505 aa13.48□□□□□ -0.25
PAAF1-216ENST00000546039 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
PAAF1-216ENST00000546039 CRY2Q49AN0 593 aa13.48□□□□□ -0.25
PAAF1-216ENST00000546039 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
PAAF1-216ENST00000546039 KAZALD1Q96I82 304 aa13.48□□□□□ -0.25
PAAF1-216ENST00000546039 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
PAAF1-216ENST00000546039 TGFB2P61812 414 aa13.47□□□□□ -0.25
PAAF1-216ENST00000546039 IRX6P78412 446 aaPredicted RBP13.47□□□□□ -0.25
PAAF1-216ENST00000546039 RABL6Q3YEC7 729 aaPredicted RBP13.47□□□□□ -0.25
PAAF1-216ENST00000546039 EPHA10Q5JZY3 1008 aa13.47□□□□□ -0.25
PAAF1-216ENST00000546039 TTLL11Q8NHH1 800 aa13.47□□□□□ -0.25
PAAF1-216ENST00000546039 RPGRQ92834 1020 aaKnown RBP13.47□□□□□ -0.25
PAAF1-216ENST00000546039 H0YIN7 160 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 CSF1RP07333 972 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 LMBR1LQ6UX01 489 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 C3orf67Q6ZVT6 689 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 C2CD5Q86YS7 1000 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 ANKRD44Q8N8A2 993 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 C1orf115Q9H7X2 142 aa13.46□□□□□ -0.25
PAAF1-216ENST00000546039 COL4A1P02462 1669 aa13.46□□□□□ -0.26
PAAF1-216ENST00000546039 SRGNP10124 158 aa13.45□□□□□ -0.26
PAAF1-216ENST00000546039 NPR1P16066 1061 aa13.45□□□□□ -0.26
PAAF1-216ENST00000546039 HOXA10P31260 410 aaPredicted RBP13.45□□□□□ -0.26
PAAF1-216ENST00000546039 MTX1Q13505 466 aa13.45□□□□□ -0.26
PAAF1-216ENST00000546039 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
PAAF1-216ENST00000546039 STYK1Q6J9G0 422 aa13.45□□□□□ -0.26
PAAF1-216ENST00000546039 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
PAAF1-216ENST00000546039 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
PAAF1-216ENST00000546039 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
PAAF1-216ENST00000546039 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
PAAF1-216ENST00000546039 CRAMP1Q96RY5 1269 aa13.44□□□□□ -0.26
PAAF1-216ENST00000546039 CDC5LQ99459 802 aaKnown RBP13.44□□□□□ -0.26
PAAF1-216ENST00000546039 FHDC1Q9C0D6 1143 aaPredicted RBP13.44□□□□□ -0.26
PAAF1-216ENST00000546039 GREM2Q9H772 168 aa13.44□□□□□ -0.26
PAAF1-216ENST00000546039 FER1L6Q2WGJ9 1857 aa13.44□□□□□ -0.26
PAAF1-216ENST00000546039 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
PAAF1-216ENST00000546039 ITGA6P23229 1130 aa13.43□□□□□ -0.26
PAAF1-216ENST00000546039 CHRNA5P30532 468 aa13.43□□□□□ -0.26
PAAF1-216ENST00000546039 IFIT5Q13325 482 aaKnown RBP13.43□□□□□ -0.26
PAAF1-216ENST00000546039 LTBP1Q14766 1721 aa13.43□□□□□ -0.26
PAAF1-216ENST00000546039 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
PAAF1-216ENST00000546039 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
PAAF1-216ENST00000546039 RPAP2Q8IXW5 612 aaPredicted RBP13.43□□□□□ -0.26
PAAF1-216ENST00000546039 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
PAAF1-216ENST00000546039 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
PAAF1-216ENST00000546039 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
PAAF1-216ENST00000546039 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
PAAF1-216ENST00000546039 HMMRO75330 724 aa13.42□□□□□ -0.26
PAAF1-216ENST00000546039 DPEP1P16444 411 aa13.42□□□□□ -0.26
PAAF1-216ENST00000546039 ALDH1B1P30837 517 aa13.42□□□□□ -0.26
PAAF1-216ENST00000546039 ATP8B2P98198 1209 aa13.42□□□□□ -0.26
PAAF1-216ENST00000546039 GRAPQ13588 217 aa13.42□□□□□ -0.26
PAAF1-216ENST00000546039 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
PAAF1-216ENST00000546039 ZNF622Q969S3 477 aaKnown RBP eCLIP13.42□□□□□ -0.262e-7■■■□□ 16.3
PAAF1-216ENST00000546039 ARAP2Q8WZ64 1704 aa13.42□□□□□ -0.26
PAAF1-216ENST00000546039 A0A0G2JLW4 131 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 PNMA6EA0A0J9YXQ4 647 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 TAF7LQ5H9L4 462 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 SSH3Q8TE77 659 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 SYT17Q9BSW7 474 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 MYH13Q9UKX3 1938 aa13.41□□□□□ -0.26
PAAF1-216ENST00000546039 KCNA3P22001 575 aa13.4□□□□□ -0.26
PAAF1-216ENST00000546039 IGHMBP2P38935 993 aaKnown RBP13.4□□□□□ -0.26
PAAF1-216ENST00000546039 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
PAAF1-216ENST00000546039 POLA2Q14181 598 aa13.4□□□□□ -0.26
PAAF1-216ENST00000546039 ERICH6BQ5W0A0 696 aa13.4□□□□□ -0.26
PAAF1-216ENST00000546039 TTLL6Q8N841 843 aa13.4□□□□□ -0.26
PAAF1-216ENST00000546039 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
PAAF1-216ENST00000546039 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-216ENST00000546039 BBOX1O75936 387 aa13.39□□□□□ -0.27
PAAF1-216ENST00000546039 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
PAAF1-216ENST00000546039 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
PAAF1-216ENST00000546039 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
PAAF1-216ENST00000546039 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
PAAF1-216ENST00000546039 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
PAAF1-216ENST00000546039 PCDHB15Q9Y5E8 787 aa13.39□□□□□ -0.27
PAAF1-216ENST00000546039 DICER1Q9UPY3 1922 aaKnown RBP13.39□□□□□ -0.27
PAAF1-216ENST00000546039 SBF1O95248 1867 aa13.38□□□□□ -0.27
PAAF1-216ENST00000546039 PTPN12Q05209 780 aaKnown RBP13.38□□□□□ -0.27
PAAF1-216ENST00000546039 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
PAAF1-216ENST00000546039 MPHOSPH8Q99549 860 aa13.38□□□□□ -0.27
PAAF1-216ENST00000546039 CHD4Q14839 1912 aa13.38□□□□□ -0.27
PAAF1-216ENST00000546039 CIAO1O76071 339 aa13.37□□□□□ -0.27
PAAF1-216ENST00000546039 LDHAL6AQ6ZMR3 332 aa13.37□□□□□ -0.27
PAAF1-216ENST00000546039 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
PAAF1-216ENST00000546039 ZNF594Q96JF6 807 aaPredicted RBP13.37□□□□□ -0.27
PAAF1-216ENST00000546039 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
PAAF1-216ENST00000546039 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
PAAF1-216ENST00000546039 EYA2O00167 538 aa13.36□□□□□ -0.27
PAAF1-216ENST00000546039 HDAC1Q13547 482 aaPredicted RBP13.36□□□□□ -0.27
PAAF1-216ENST00000546039 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
PAAF1-216ENST00000546039 SOGA3Q5TF21 947 aa13.36□□□□□ -0.27
PAAF1-216ENST00000546039 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
PAAF1-216ENST00000546039 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms