RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ATP2B4P23634 1241 aa9.75□□□□□ -0.85
SNHG1-224ENST00000545688 CMTR1Q8N1G2 835 aaKnown RBP9.75□□□□□ -0.85
SNHG1-224ENST00000545688 C11orf16Q9NQ32 467 aa9.75□□□□□ -0.85
SNHG1-224ENST00000545688 C1QTNF9BB2RNN3 333 aa9.74□□□□□ -0.85
SNHG1-224ENST00000545688 PTCD1O75127 700 aaKnown RBP9.74□□□□□ -0.85
SNHG1-224ENST00000545688 RARAP10276 462 aa9.74□□□□□ -0.85
SNHG1-224ENST00000545688 BRD2P25440 801 aaKnown RBP9.74□□□□□ -0.85
SNHG1-224ENST00000545688 CHRNA4P43681 627 aa9.74□□□□□ -0.85
SNHG1-224ENST00000545688 CD163Q86VB7 1156 aa9.74□□□□□ -0.85
SNHG1-224ENST00000545688 NUDT8Q8WV74 236 aa9.74□□□□□ -0.85
SNHG1-224ENST00000545688 LILRB5O75023 590 aa9.73□□□□□ -0.85
SNHG1-224ENST00000545688 SPATA31C1P0DKV0 1188 aa9.73□□□□□ -0.85
SNHG1-224ENST00000545688 PSAPL1Q6NUJ1 521 aa9.73□□□□□ -0.85
SNHG1-224ENST00000545688 DHX32Q7L7V1 743 aaKnown RBP9.73□□□□□ -0.85
SNHG1-224ENST00000545688 JPH1Q9HDC5 661 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-224ENST00000545688 KCNMB2Q9Y691 235 aa9.73□□□□□ -0.85
SNHG1-224ENST00000545688 SPDYE3A6NKU9 549 aa9.72□□□□□ -0.85
SNHG1-224ENST00000545688 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
SNHG1-224ENST00000545688 XYLBO75191 536 aa9.72□□□□□ -0.85
SNHG1-224ENST00000545688 EGFRP00533 1210 aa9.72□□□□□ -0.85
SNHG1-224ENST00000545688 ZBTB42B2RXF5 422 aa9.71□□□□□ -0.86
SNHG1-224ENST00000545688 CPB1P15086 417 aa9.71□□□□□ -0.86
SNHG1-224ENST00000545688 MLLT1Q03111 559 aaPredicted RBP9.71□□□□□ -0.86
SNHG1-224ENST00000545688 SUZ12Q15022 739 aaKnown RBP9.71□□□□□ -0.86
SNHG1-224ENST00000545688 PRRT3Q5FWE3 981 aa9.71□□□□□ -0.86
SNHG1-224ENST00000545688 FAM35AQ86V20 835 aa9.71□□□□□ -0.86
SNHG1-224ENST00000545688 SEPT3Q9UH03 358 aa9.71□□□□□ -0.86
SNHG1-224ENST00000545688 TRIP4Q15650 581 aaPredicted RBP9.7□□□□□ -0.86
SNHG1-224ENST00000545688 PCSK7Q16549 785 aa9.7□□□□□ -0.86
SNHG1-224ENST00000545688 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
SNHG1-224ENST00000545688 TMEM88BA6NKF7 163 aa9.69□□□□□ -0.86
SNHG1-224ENST00000545688 PPP1R15AO75807 674 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-224ENST00000545688 GPLD1P80108 840 aa9.69□□□□□ -0.86
SNHG1-224ENST00000545688 RGS9O75916 674 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-224ENST00000545688 SCNN1AP37088 669 aa9.68□□□□□ -0.86
SNHG1-224ENST00000545688 ZAP70P43403 619 aa9.68□□□□□ -0.86
SNHG1-224ENST00000545688 BAG6P46379 1132 aa9.68□□□□□ -0.86
SNHG1-224ENST00000545688 AFF1P51825 1210 aaKnown RBP9.68□□□□□ -0.86
SNHG1-224ENST00000545688 TRIM28Q13263 835 aaKnown RBP9.68□□□□□ -0.86
SNHG1-224ENST00000545688 TRAPPC3LQ5T215 181 aa9.68□□□□□ -0.86
SNHG1-224ENST00000545688 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
SNHG1-224ENST00000545688 TLR7Q9NYK1 1049 aaKnown RBP9.68□□□□□ -0.86
SNHG1-224ENST00000545688 STIM2Q9P246 746 aa9.68□□□□□ -0.86
SNHG1-224ENST00000545688 MMP20O60882 483 aa9.67□□□□□ -0.86
SNHG1-224ENST00000545688 PERM1Q5SV97 790 aa9.67□□□□□ -0.86
SNHG1-224ENST00000545688 HFE2Q6ZVN8 426 aa9.67□□□□□ -0.86
SNHG1-224ENST00000545688 ZBTB39O15060 712 aa9.66□□□□□ -0.86
SNHG1-224ENST00000545688 NRLP54845 237 aa9.66□□□□□ -0.86
SNHG1-224ENST00000545688 PLAURQ03405 335 aa9.66□□□□□ -0.86
SNHG1-224ENST00000545688 FRRS1LQ9P0K9 344 aa9.66□□□□□ -0.86
SNHG1-224ENST00000545688 A0A0A0MRY4 1105 aa9.65□□□□□ -0.86
SNHG1-224ENST00000545688 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-224ENST00000545688 GRIK4Q16099 956 aa9.65□□□□□ -0.86
SNHG1-224ENST00000545688 ELMSAN1Q6PJG2 1045 aa9.65□□□□□ -0.86
SNHG1-224ENST00000545688 GPR152Q8TDT2 470 aa9.65□□□□□ -0.86
SNHG1-224ENST00000545688 PIK3R5Q8WYR1 880 aa9.65□□□□□ -0.86
SNHG1-224ENST00000545688 FAM13BQ9NYF5 915 aa9.65□□□□□ -0.86
SNHG1-224ENST00000545688 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
SNHG1-224ENST00000545688 APBA3O96018 575 aa9.64□□□□□ -0.87
SNHG1-224ENST00000545688 PSAPP07602 524 aa9.64□□□□□ -0.87
SNHG1-224ENST00000545688 GRIK5Q16478 980 aa9.64□□□□□ -0.87
SNHG1-224ENST00000545688 NLRP13Q86W25 1043 aa9.64□□□□□ -0.87
SNHG1-224ENST00000545688 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
SNHG1-224ENST00000545688 CARNS1A5YM72 827 aa9.63□□□□□ -0.87
SNHG1-224ENST00000545688 EIF2AK2P19525 551 aaKnown RBP9.63□□□□□ -0.87
SNHG1-224ENST00000545688 DMRTC2Q8IXT2 367 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-224ENST00000545688 NSUN5Q96P11 429 aaKnown RBP9.63□□□□□ -0.87
SNHG1-224ENST00000545688 SMG9Q9H0W8 520 aaKnown RBP9.63□□□□□ -0.87
SNHG1-224ENST00000545688 J3QW42 95 aa9.62□□□□□ -0.87
SNHG1-224ENST00000545688 ADAM23O75077 832 aa9.62□□□□□ -0.87
SNHG1-224ENST00000545688 SSFA2P28290 1259 aa9.62□□□□□ -0.87
SNHG1-224ENST00000545688 GATA4P43694 442 aa9.62□□□□□ -0.87
SNHG1-224ENST00000545688 ILDR2Q71H61 639 aa9.62□□□□□ -0.87
SNHG1-224ENST00000545688 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
SNHG1-224ENST00000545688 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
SNHG1-224ENST00000545688 FURINP09958 794 aa9.61□□□□□ -0.87
SNHG1-224ENST00000545688 HOXD8P13378 290 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-224ENST00000545688 SOX18P35713 384 aa9.61□□□□□ -0.87
SNHG1-224ENST00000545688 SIK1P57059 783 aa9.61□□□□□ -0.87
SNHG1-224ENST00000545688 MSL1Q68DK7 614 aa9.61□□□□□ -0.87
SNHG1-224ENST00000545688 ATCAYQ86WG3 371 aa9.61□□□□□ -0.87
SNHG1-224ENST00000545688 TTC9Q92623 222 aa9.61□□□□□ -0.87
SNHG1-224ENST00000545688 RAC1P63000 192 aa9.6□□□□□ -0.87
SNHG1-224ENST00000545688 NACC1Q96RE7 527 aa9.6□□□□□ -0.87
SNHG1-224ENST00000545688 GHRHP01286 108 aa9.59□□□□□ -0.87
SNHG1-224ENST00000545688 ELNP15502 786 aa9.59□□□□□ -0.87
SNHG1-224ENST00000545688 DOC2BQ14184 412 aa9.59□□□□□ -0.87
SNHG1-224ENST00000545688 OR13H1Q8NG92 308 aa9.59□□□□□ -0.87
SNHG1-224ENST00000545688 GTF3C2Q8WUA4 911 aaPredicted RBP9.59□□□□□ -0.87
SNHG1-224ENST00000545688 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
SNHG1-224ENST00000545688 FNDC3AQ9Y2H6 1198 aaKnown RBP9.59□□□□□ -0.87
SNHG1-224ENST00000545688 K7ELQ4 463 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-224ENST00000545688 SELPP16109 830 aa9.58□□□□□ -0.88
SNHG1-224ENST00000545688 PHLDB3Q6NSJ2 640 aa9.58□□□□□ -0.88
SNHG1-224ENST00000545688 SHISA2Q6UWI4 295 aa9.58□□□□□ -0.88
SNHG1-224ENST00000545688 WFDC8Q8IUA0 241 aa9.58□□□□□ -0.88
SNHG1-224ENST00000545688 FMR1NBQ8N0W7 255 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-224ENST00000545688 NUDT16Q96DE0 195 aaKnown RBP9.58□□□□□ -0.88
SNHG1-224ENST00000545688 MPSTP25325 297 aa9.57□□□□□ -0.88
SNHG1-224ENST00000545688 MTMR3Q13615 1198 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms