RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 H0YIN7 160 aa16.24■□□□□ 0.19
CDCA3-210ENST00000545368 RABL6Q3YEC7 729 aaPredicted RBP16.24■□□□□ 0.19
CDCA3-210ENST00000545368 CRY2Q49AN0 593 aa16.24■□□□□ 0.19
CDCA3-210ENST00000545368 LMBR1LQ6UX01 489 aa16.24■□□□□ 0.19
CDCA3-210ENST00000545368 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
CDCA3-210ENST00000545368 TTLL11Q8NHH1 800 aa16.24■□□□□ 0.19
CDCA3-210ENST00000545368 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
CDCA3-210ENST00000545368 KLRG2A4D1S0 409 aaPredicted RBP16.23■□□□□ 0.19
CDCA3-210ENST00000545368 CSF1RP07333 972 aa16.23■□□□□ 0.19
CDCA3-210ENST00000545368 TGFB2P61812 414 aa16.23■□□□□ 0.19
CDCA3-210ENST00000545368 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
CDCA3-210ENST00000545368 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
CDCA3-210ENST00000545368 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
CDCA3-210ENST00000545368 CCDC85AQ96PX6 553 aaPredicted RBP16.23■□□□□ 0.19
CDCA3-210ENST00000545368 RTL9Q8NET4 1388 aa16.23■□□□□ 0.19
CDCA3-210ENST00000545368 SRGNP10124 158 aa16.22■□□□□ 0.19
CDCA3-210ENST00000545368 NPR1P16066 1061 aa16.22■□□□□ 0.19
CDCA3-210ENST00000545368 IFIT5Q13325 482 aaKnown RBP16.22■□□□□ 0.19
CDCA3-210ENST00000545368 CCDC57Q2TAC2 916 aa16.22■□□□□ 0.19
CDCA3-210ENST00000545368 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
CDCA3-210ENST00000545368 MASTLQ96GX5 879 aa16.22■□□□□ 0.19
CDCA3-210ENST00000545368 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
CDCA3-210ENST00000545368 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
CDCA3-210ENST00000545368 ANKRD18BA2A2Z9 1011 aa16.21■□□□□ 0.19
CDCA3-210ENST00000545368 SRGAP3O43295 1099 aa16.21■□□□□ 0.19
CDCA3-210ENST00000545368 ITGA6P23229 1130 aa16.21■□□□□ 0.19
CDCA3-210ENST00000545368 MTX1Q13505 466 aa16.21■□□□□ 0.19
CDCA3-210ENST00000545368 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.19
CDCA3-210ENST00000545368 STYK1Q6J9G0 422 aa16.21■□□□□ 0.19
CDCA3-210ENST00000545368 CEP85Q6P2H3 762 aa16.21■□□□□ 0.19
CDCA3-210ENST00000545368 RPAP2Q8IXW5 612 aaPredicted RBP16.21■□□□□ 0.19
CDCA3-210ENST00000545368 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.194e-7■□□□□ 9.1
CDCA3-210ENST00000545368 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
CDCA3-210ENST00000545368 GREM2Q9H772 168 aa16.21■□□□□ 0.19
CDCA3-210ENST00000545368 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
CDCA3-210ENST00000545368 HMMRO75330 724 aa16.2■□□□□ 0.18
CDCA3-210ENST00000545368 CHRNA5P30532 468 aa16.2■□□□□ 0.18
CDCA3-210ENST00000545368 ATP8B2P98198 1209 aa16.2■□□□□ 0.18
CDCA3-210ENST00000545368 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
CDCA3-210ENST00000545368 DPEP1P16444 411 aa16.19■□□□□ 0.18
CDCA3-210ENST00000545368 ALDH1B1P30837 517 aa16.19■□□□□ 0.18
CDCA3-210ENST00000545368 HOXA10P31260 410 aaPredicted RBP16.19■□□□□ 0.18
CDCA3-210ENST00000545368 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
CDCA3-210ENST00000545368 GRAPQ13588 217 aa16.19■□□□□ 0.18
CDCA3-210ENST00000545368 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
CDCA3-210ENST00000545368 CRAMP1Q96RY5 1269 aa16.19■□□□□ 0.18
CDCA3-210ENST00000545368 FHDC1Q9C0D6 1143 aaPredicted RBP16.19■□□□□ 0.18
CDCA3-210ENST00000545368 A0A0G2JLW4 131 aa16.18■□□□□ 0.18
CDCA3-210ENST00000545368 ANKRD18AQ8IVF6 992 aa16.18■□□□□ 0.18
CDCA3-210ENST00000545368 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
CDCA3-210ENST00000545368 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
CDCA3-210ENST00000545368 TAF1P21675 1872 aa16.18■□□□□ 0.18
CDCA3-210ENST00000545368 BRCA1P38398 1863 aaKnown RBP16.17■□□□□ 0.18
CDCA3-210ENST00000545368 PNMA6EA0A0J9YXQ4 647 aa16.17■□□□□ 0.18
CDCA3-210ENST00000545368 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
CDCA3-210ENST00000545368 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
CDCA3-210ENST00000545368 POLA2Q14181 598 aa16.16■□□□□ 0.18
CDCA3-210ENST00000545368 TMC4Q7Z404 712 aa16.16■□□□□ 0.18
CDCA3-210ENST00000545368 NLGN2Q8NFZ4 835 aa16.16■□□□□ 0.18
CDCA3-210ENST00000545368 SSH3Q8TE77 659 aa16.16■□□□□ 0.18
CDCA3-210ENST00000545368 PIM2Q9P1W9 311 aa16.16■□□□□ 0.18
CDCA3-210ENST00000545368 PCDHB15Q9Y5E8 787 aa16.16■□□□□ 0.18
CDCA3-210ENST00000545368 PPEF1O14829 653 aaPredicted RBP16.15■□□□□ 0.18
CDCA3-210ENST00000545368 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
CDCA3-210ENST00000545368 RPS8P62241 208 aaKnown RBP16.15■□□□□ 0.18
CDCA3-210ENST00000545368 TTLL6Q8N841 843 aa16.15■□□□□ 0.18
CDCA3-210ENST00000545368 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
CDCA3-210ENST00000545368 SYT17Q9BSW7 474 aa16.15■□□□□ 0.18
CDCA3-210ENST00000545368 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
CDCA3-210ENST00000545368 BBOX1O75936 387 aa16.14■□□□□ 0.17
CDCA3-210ENST00000545368 KCNA3P22001 575 aa16.14■□□□□ 0.17
CDCA3-210ENST00000545368 PTPN12Q05209 780 aaKnown RBP16.14■□□□□ 0.17
CDCA3-210ENST00000545368 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
CDCA3-210ENST00000545368 LDHAL6AQ6ZMR3 332 aa16.14■□□□□ 0.17
CDCA3-210ENST00000545368 SIRT2Q8IXJ6 389 aa16.14■□□□□ 0.17
CDCA3-210ENST00000545368 ZNF594Q96JF6 807 aaPredicted RBP16.14■□□□□ 0.17
CDCA3-210ENST00000545368 COPRSQ9NQ92 184 aa16.14■□□□□ 0.17
CDCA3-210ENST00000545368 CNNM1Q9NRU3 951 aa16.14■□□□□ 0.17
CDCA3-210ENST00000545368 COL4A1P02462 1669 aa16.14■□□□□ 0.17
CDCA3-210ENST00000545368 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
CDCA3-210ENST00000545368 DALRD3Q5D0E6 543 aaKnown RBP16.13■□□□□ 0.17
CDCA3-210ENST00000545368 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
CDCA3-210ENST00000545368 SIL1Q9H173 461 aa16.13■□□□□ 0.17
CDCA3-210ENST00000545368 RWDD1Q9H446 243 aaPredicted RBP16.13■□□□□ 0.17
CDCA3-210ENST00000545368 BSDC1Q9NW68 430 aaPredicted RBP16.13■□□□□ 0.17
CDCA3-210ENST00000545368 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
CDCA3-210ENST00000545368 LRRC37AA6NMS7 1700 aa16.13■□□□□ 0.17
CDCA3-210ENST00000545368 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
CDCA3-210ENST00000545368 CIAO1O76071 339 aa16.12■□□□□ 0.17
CDCA3-210ENST00000545368 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.17
CDCA3-210ENST00000545368 OS9Q13438 667 aaPredicted RBP16.12■□□□□ 0.17
CDCA3-210ENST00000545368 HDAC1Q13547 482 aaPredicted RBP16.12■□□□□ 0.17
CDCA3-210ENST00000545368 HSP90AB4PQ58FF6 505 aa16.12■□□□□ 0.17
CDCA3-210ENST00000545368 PA2G4Q9UQ80 394 aaKnown RBP16.12■□□□□ 0.17
CDCA3-210ENST00000545368 ARFGEF1Q9Y6D6 1849 aa16.11■□□□□ 0.17
CDCA3-210ENST00000545368 EYA2O00167 538 aa16.11■□□□□ 0.17
CDCA3-210ENST00000545368 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
CDCA3-210ENST00000545368 IL15P40933 162 aaPredicted RBP16.1■□□□□ 0.17
CDCA3-210ENST00000545368 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
CDCA3-210ENST00000545368 SP8Q8IXZ3 490 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms