RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 CHGBP05060 677 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 KIF6Q6ZMV9 814 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 RXRAP19793 462 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 GCKRQ14397 625 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 RASSF8Q8NHQ8 419 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 PPP1R9BQ96SB3 815 aa10.22□□□□□ -0.77
CCDC7-210ENST00000545067 A0A087WWV3 80 aa10.21□□□□□ -0.77
CCDC7-210ENST00000545067 CDK11BP21127 795 aaKnown RBP10.21□□□□□ -0.77
CCDC7-210ENST00000545067 PTGS1P23219 599 aa10.21□□□□□ -0.77
CCDC7-210ENST00000545067 HSP90AA4PQ58FG1 418 aa10.21□□□□□ -0.77
CCDC7-210ENST00000545067 FSIP1Q8NA03 581 aa10.21□□□□□ -0.77
CCDC7-210ENST00000545067 U3KPZ7 1027 aaPredicted RBP10.21□□□□□ -0.77
CCDC7-210ENST00000545067 LIG1P18858 919 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 DDIT3P35638 169 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 HSPA2P54652 639 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 CBX1P83916 185 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 ZNF589Q86UQ0 364 aaPredicted RBP10.21□□□□□ -0.78
CCDC7-210ENST00000545067 PDILTQ8N807 584 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 NUP133Q8WUM0 1156 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 ZNF396Q96N95 335 aaPredicted RBP10.21□□□□□ -0.78
CCDC7-210ENST00000545067 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 TYRO3Q06418 890 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 CUL4AQ13619 759 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 MCMDC2Q4G0Z9 681 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 HELBQ8NG08 1087 aaPredicted RBP10.21□□□□□ -0.78
CCDC7-210ENST00000545067 CWC25Q9NXE8 425 aaPredicted RBP10.21□□□□□ -0.78
CCDC7-210ENST00000545067 CLIP2Q9UDT6 1046 aa10.21□□□□□ -0.78
CCDC7-210ENST00000545067 GOLGA8BA8MQT2 603 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 CCAR1Q8IX12 1150 aaKnown RBP10.2□□□□□ -0.78
CCDC7-210ENST00000545067 MTMR6Q9Y217 621 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 PPLO60437 1756 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 CRB1P82279 1406 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 SASH1O94885 1247 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
CCDC7-210ENST00000545067 TNNI3KQ59H18 835 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 LDHAL6AQ6ZMR3 332 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 VPS37DQ86XT2 251 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 FAM89AQ96GI7 184 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 IQSEC3Q9UPP2 1182 aaPredicted RBP10.2□□□□□ -0.78
CCDC7-210ENST00000545067 FPGT-TNNI3KV9GXZ4 949 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 MAP2P11137 1827 aaKnown RBP10.2□□□□□ -0.78
CCDC7-210ENST00000545067 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 HMGN5P82970 282 aaKnown RBP10.2□□□□□ -0.78
CCDC7-210ENST00000545067 IMMTQ16891 758 aaKnown RBP10.2□□□□□ -0.78
CCDC7-210ENST00000545067 C8orf76Q96K31 380 aa10.2□□□□□ -0.78
CCDC7-210ENST00000545067 NEURL1BA8MQ27 555 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 IFIT5Q13325 482 aaKnown RBP10.19□□□□□ -0.78
CCDC7-210ENST00000545067 TTC6Q86TZ1 520 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 MICU3Q86XE3 530 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 TBC1D2BQ9UPU7 963 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 SHPRHQ149N8 1683 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 RPS6KB1P23443 525 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 EPHA10Q5JZY3 1008 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 PAG1Q9NWQ8 432 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 ABCF2Q9UG63 623 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 METTL22Q9BUU2 404 aaPredicted RBP10.19□□□□□ -0.78
CCDC7-210ENST00000545067 PLEKHG1Q9ULL1 1385 aa10.19□□□□□ -0.78
CCDC7-210ENST00000545067 TTLL5Q6EMB2 1281 aa10.18□□□□□ -0.78
CCDC7-210ENST00000545067 TTLL7Q6ZT98 887 aa10.18□□□□□ -0.78
CCDC7-210ENST00000545067 FAM200AQ8TCP9 573 aa10.18□□□□□ -0.78
CCDC7-210ENST00000545067 SLC52A2Q9HAB3 445 aa10.18□□□□□ -0.78
CCDC7-210ENST00000545067 TMOD3Q9NYL9 352 aa10.18□□□□□ -0.78
CCDC7-210ENST00000545067 ORC3Q9UBD5 711 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 KLF18A0A0U1RQI7 1052 aa10.18□□□□□ -0.78
CCDC7-210ENST00000545067 MARCKSP29966 332 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 DBNLQ9UJU6 430 aaKnown RBP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 V9GYY5 206 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 PTPDC1A2A3K4 754 aa10.18□□□□□ -0.78
CCDC7-210ENST00000545067 CEP57L1Q8IYX8 460 aa10.18□□□□□ -0.78
CCDC7-210ENST00000545067 ARHGEF28Q8N1W1 1705 aaKnown RBP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 FTOQ9C0B1 505 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 NAT10Q9H0A0 1025 aaKnown RBP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 TRMT112Q9UI30 125 aaKnown RBP10.18□□□□□ -0.78
CCDC7-210ENST00000545067 ZNF213O14771 459 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 CYP2E1P05181 493 aaPredicted RBP10.17□□□□□ -0.78
CCDC7-210ENST00000545067 HOXB7P09629 217 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 BICDL1Q6ZP65 573 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 CCDC112Q8NEF3 446 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 MPHOSPH8Q99549 860 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 PDCL3Q9H2J4 239 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 DDX19AQ9NUU7 478 aaKnown RBP10.17□□□□□ -0.78
CCDC7-210ENST00000545067 HMG20BQ9P0W2 317 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 RGS12O14924 1447 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 AOX1Q06278 1338 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 DHX16O60231 1041 aaKnown RBP10.17□□□□□ -0.78
CCDC7-210ENST00000545067 SERPINC1P01008 464 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 POLA2Q14181 598 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 ZBTB9Q96C00 473 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 BABAM1Q9NWV8 329 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 ERICH2A1L162 156 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 IGSF3O75054 1194 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 TNNT1P13805 278 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 SAFBQ15424 915 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC7-210ENST00000545067 SLC4A8Q2Y0W8 1093 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 ARHGEF25Q86VW2 580 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
CCDC7-210ENST00000545067 TMX1Q9H3N1 280 aa10.17□□□□□ -0.78
CCDC7-210ENST00000545067 ZSWIM6Q9HCJ5 1215 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms