RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PDE8AO60658 829 aa16.45■□□□□ 0.22
DDX11-227ENST00000544652 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
DDX11-227ENST00000544652 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
DDX11-227ENST00000544652 RTL5Q5HYW3 569 aaPredicted RBP16.45■□□□□ 0.22
DDX11-227ENST00000544652 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
DDX11-227ENST00000544652 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
DDX11-227ENST00000544652 ZBTB40Q9NUA8 1239 aa16.45■□□□□ 0.22
DDX11-227ENST00000544652 HDAC5Q9UQL6 1122 aa16.45■□□□□ 0.22
DDX11-227ENST00000544652 FOXO4P98177 505 aa16.44■□□□□ 0.22
DDX11-227ENST00000544652 RABL6Q3YEC7 729 aaPredicted RBP16.44■□□□□ 0.22
DDX11-227ENST00000544652 CCDC24Q8N4L8 307 aa16.44■□□□□ 0.22
DDX11-227ENST00000544652 SLX4Q8IY92 1834 aa16.44■□□□□ 0.22
DDX11-227ENST00000544652 LRRC37AA6NMS7 1700 aa16.44■□□□□ 0.22
DDX11-227ENST00000544652 COL4A1P02462 1669 aa16.43■□□□□ 0.22
DDX11-227ENST00000544652 NPHP1O15259 732 aa16.43■□□□□ 0.22
DDX11-227ENST00000544652 CSF1RP07333 972 aa16.43■□□□□ 0.22
DDX11-227ENST00000544652 HCLS1P14317 486 aaPredicted RBP16.43■□□□□ 0.22
DDX11-227ENST00000544652 SF3B3Q15393 1217 aaKnown RBP16.43■□□□□ 0.22
DDX11-227ENST00000544652 CRY2Q49AN0 593 aa16.43■□□□□ 0.22
DDX11-227ENST00000544652 EPHA10Q5JZY3 1008 aa16.43■□□□□ 0.22
DDX11-227ENST00000544652 NLRP3Q96P20 1036 aa16.43■□□□□ 0.22
DDX11-227ENST00000544652 RTL9Q8NET4 1388 aa16.42■□□□□ 0.22
DDX11-227ENST00000544652 GNAI2P04899 355 aa16.42■□□□□ 0.22
DDX11-227ENST00000544652 PDE6BP35913 854 aa16.42■□□□□ 0.22
DDX11-227ENST00000544652 AAMPQ13685 434 aa16.42■□□□□ 0.22
DDX11-227ENST00000544652 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
DDX11-227ENST00000544652 TTLL11Q8NHH1 800 aa16.42■□□□□ 0.22
DDX11-227ENST00000544652 PDZRN3Q9UPQ7 1066 aa16.42■□□□□ 0.22
DDX11-227ENST00000544652 CD2APQ9Y5K6 639 aa16.42■□□□□ 0.22
DDX11-227ENST00000544652 LRRFIP2Q9Y608 721 aaKnown RBP16.42■□□□□ 0.22
DDX11-227ENST00000544652 CTSWP56202 376 aa16.41■□□□□ 0.22
DDX11-227ENST00000544652 ANKRD44Q8N8A2 993 aa16.41■□□□□ 0.22
DDX11-227ENST00000544652 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
DDX11-227ENST00000544652 BICC1Q9H694 974 aaKnown RBP16.41■□□□□ 0.22
DDX11-227ENST00000544652 TGFB2P61812 414 aa16.4■□□□□ 0.22
DDX11-227ENST00000544652 MTX1Q13505 466 aa16.4■□□□□ 0.22
DDX11-227ENST00000544652 SRGNP10124 158 aa16.39■□□□□ 0.21
DDX11-227ENST00000544652 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.21
DDX11-227ENST00000544652 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
DDX11-227ENST00000544652 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
DDX11-227ENST00000544652 FER1L6Q2WGJ9 1857 aa16.38■□□□□ 0.21
DDX11-227ENST00000544652 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
DDX11-227ENST00000544652 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
DDX11-227ENST00000544652 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
DDX11-227ENST00000544652 LTBP1Q14766 1721 aa16.38■□□□□ 0.21
DDX11-227ENST00000544652 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
DDX11-227ENST00000544652 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
DDX11-227ENST00000544652 H0YIN7 160 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 NPR1P16066 1061 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 KCNA3P22001 575 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 ATP8B2P98198 1209 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 STYK1Q6J9G0 422 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 C2CD5Q86YS7 1000 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 RPAP2Q8IXW5 612 aaPredicted RBP16.36■□□□□ 0.21
DDX11-227ENST00000544652 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 GREM2Q9H772 168 aa16.36■□□□□ 0.21
DDX11-227ENST00000544652 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
DDX11-227ENST00000544652 CHRNA5P30532 468 aa16.35■□□□□ 0.21
DDX11-227ENST00000544652 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
DDX11-227ENST00000544652 PLCB2Q00722 1185 aa16.35■□□□□ 0.21
DDX11-227ENST00000544652 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
DDX11-227ENST00000544652 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
DDX11-227ENST00000544652 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
DDX11-227ENST00000544652 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
DDX11-227ENST00000544652 DPEP1P16444 411 aa16.34■□□□□ 0.21
DDX11-227ENST00000544652 ITGA6P23229 1130 aa16.34■□□□□ 0.21
DDX11-227ENST00000544652 DDX46Q7L014 1031 aaKnown RBP16.34■□□□□ 0.21
DDX11-227ENST00000544652 SSH3Q8TE77 659 aa16.34■□□□□ 0.21
DDX11-227ENST00000544652 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
DDX11-227ENST00000544652 PPP1R1BQ9UD71 204 aaPredicted RBP16.34■□□□□ 0.21
DDX11-227ENST00000544652 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
DDX11-227ENST00000544652 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 ABCB7O75027 752 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 NEFLP07196 543 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 ALDH1B1P30837 517 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.2
DDX11-227ENST00000544652 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 CCDC85AQ96PX6 553 aaPredicted RBP16.33■□□□□ 0.2
DDX11-227ENST00000544652 SYT17Q9BSW7 474 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 SEC31BQ9NQW1 1179 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 ARAP2Q8WZ64 1704 aa16.33■□□□□ 0.2
DDX11-227ENST00000544652 SRGAP3O43295 1099 aa16.32■□□□□ 0.2
DDX11-227ENST00000544652 SBF1O95248 1867 aa16.32■□□□□ 0.2
DDX11-227ENST00000544652 GRAPQ13588 217 aa16.32■□□□□ 0.2
DDX11-227ENST00000544652 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
DDX11-227ENST00000544652 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
DDX11-227ENST00000544652 GRAPLQ8TC17 118 aaPredicted RBP16.32■□□□□ 0.2
DDX11-227ENST00000544652 CELF1Q92879 486 aaKnown RBP16.32■□□□□ 0.2
DDX11-227ENST00000544652 CNKSR1Q969H4 720 aa16.32■□□□□ 0.2
DDX11-227ENST00000544652 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
DDX11-227ENST00000544652 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
DDX11-227ENST00000544652 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
DDX11-227ENST00000544652 PTPN12Q05209 780 aaKnown RBP16.31■□□□□ 0.2
DDX11-227ENST00000544652 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
DDX11-227ENST00000544652 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
DDX11-227ENST00000544652 COPRSQ9NQ92 184 aa16.31■□□□□ 0.2
DDX11-227ENST00000544652 BBOX1O75936 387 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms