RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 PLEKHG3A1L390 1219 aa15.52■□□□□ 0.08
PCMTD1-208ENST00000544451 PES1O00541 588 aaKnown RBP15.52■□□□□ 0.08
PCMTD1-208ENST00000544451 CEP57L1Q8IYX8 460 aa15.52■□□□□ 0.08
PCMTD1-208ENST00000544451 DBNDD2Q9BQY9 259 aa15.52■□□□□ 0.08
PCMTD1-208ENST00000544451 ZC3H13Q5T200 1668 aaKnown RBP15.52■□□□□ 0.08
PCMTD1-208ENST00000544451 MAP2P11137 1827 aaKnown RBP15.52■□□□□ 0.08
PCMTD1-208ENST00000544451 SERPINC1P01008 464 aa15.52■□□□□ 0.07
PCMTD1-208ENST00000544451 TRDNQ13061 729 aa15.52■□□□□ 0.07
PCMTD1-208ENST00000544451 LMBR1LQ6UX01 489 aa15.52■□□□□ 0.07
PCMTD1-208ENST00000544451 LEO1Q8WVC0 666 aaPredicted RBP15.52■□□□□ 0.07
PCMTD1-208ENST00000544451 TTC41PQ6P2S7 1318 aa15.52■□□□□ 0.07
PCMTD1-208ENST00000544451 CABLES1Q8TDN4 633 aa15.52■□□□□ 0.07
PCMTD1-208ENST00000544451 TAF6LQ9Y6J9 622 aa15.52■□□□□ 0.07
PCMTD1-208ENST00000544451 A0A1B0GVL5 298 aa15.51■□□□□ 0.07
PCMTD1-208ENST00000544451 MNS1Q8NEH6 495 aa15.51■□□□□ 0.07
PCMTD1-208ENST00000544451 ZNF396Q96N95 335 aaPredicted RBP15.51■□□□□ 0.07
PCMTD1-208ENST00000544451 NAT10Q9H0A0 1025 aaKnown RBP15.51■□□□□ 0.07
PCMTD1-208ENST00000544451 RXRAP19793 462 aa15.51■□□□□ 0.07
PCMTD1-208ENST00000544451 CABP4P57796 275 aa15.51■□□□□ 0.07
PCMTD1-208ENST00000544451 KRT32Q14532 448 aa15.51■□□□□ 0.07
PCMTD1-208ENST00000544451 CEP135Q66GS9 1140 aa15.51■□□□□ 0.07
PCMTD1-208ENST00000544451 ANKRD13DQ6ZTN6 518 aa15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 TMC6Q7Z403 805 aa15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 LINS1Q8NG48 757 aa15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 NPHP3Q7Z494 1330 aa15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 IFIT1P09914 478 aaKnown RBP15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 RPS6KB1P23443 525 aa15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 MARCKSP29966 332 aaPredicted RBP15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 TATP17735 454 aaPredicted RBP15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 ARID5BQ14865 1188 aa15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 MROH1Q8NDA8 1641 aa15.5■□□□□ 0.07
PCMTD1-208ENST00000544451 PTPN21Q16825 1174 aa15.49■□□□□ 0.07
PCMTD1-208ENST00000544451 CGNQ9P2M7 1197 aaKnown RBP15.49■□□□□ 0.07
PCMTD1-208ENST00000544451 VIRMAQ69YN4 1812 aaKnown RBP15.49■□□□□ 0.07
PCMTD1-208ENST00000544451 TULP1O00294 542 aaPredicted RBP15.49■□□□□ 0.07
PCMTD1-208ENST00000544451 TTC39AQ5SRH9 613 aa15.49■□□□□ 0.07
PCMTD1-208ENST00000544451 ZSWIM6Q9HCJ5 1215 aa15.49■□□□□ 0.07
PCMTD1-208ENST00000544451 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
PCMTD1-208ENST00000544451 LMOD1P29536 600 aaPredicted RBP15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 IGSF1Q8N6C5 1336 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 TRIM29Q14134 588 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 CFAP100Q494V2 611 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 AKAP4Q5JQC9 854 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 ZNF594Q96JF6 807 aaPredicted RBP15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 ORAI2Q96SN7 254 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 PTPDC1A2A3K4 754 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 RNMTO43148 476 aaKnown RBP15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 IDH1O75874 414 aaKnown RBP15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 C8orf76Q96K31 380 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 MRVI1Q9Y6F6 885 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 VWDEQ8N2E2 1590 aa15.48■□□□□ 0.07
PCMTD1-208ENST00000544451 ARAP3Q8WWN8 1544 aa15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 CCDC69A6NI79 296 aa15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 GOLGA8BA8MQT2 603 aa15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 PROSER2Q86WR7 435 aaPredicted RBP15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 STRN4Q9NRL3 753 aa15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 TERF1P54274 439 aa15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 COL9A3Q14050 684 aaPredicted RBP15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 SKIDA1Q1XH10 827 aa15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 CEP126Q9P2H0 1117 aa15.47■□□□□ 0.07
PCMTD1-208ENST00000544451 DDX17Q92841 729 aaKnown RBP15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 TTC14Q96N46 770 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 ANO10Q9NW15 660 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 USP6P35125 1406 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 ABCA9Q8IUA7 1624 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 ARHGEF10O15013 1369 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 ALDH1L1O75891 902 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 SASH1O94885 1247 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 GCP02774 474 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 ZNF75DP51815 510 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 CPLX2Q6PUV4 134 aaKnown RBP15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 MTMR7Q9Y216 660 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 DEPDC5O75140 1603 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 PPLO60437 1756 aa15.46■□□□□ 0.07
PCMTD1-208ENST00000544451 STX1AQ16623 288 aa15.46■□□□□ 0.06
PCMTD1-208ENST00000544451 MCMDC2Q4G0Z9 681 aa15.46■□□□□ 0.06
PCMTD1-208ENST00000544451 AMOTQ4VCS5 1084 aa15.46■□□□□ 0.06
PCMTD1-208ENST00000544451 KIAA1524Q8TCG1 905 aa15.46■□□□□ 0.06
PCMTD1-208ENST00000544451 ZSWIM4Q9H7M6 989 aa15.46■□□□□ 0.06
PCMTD1-208ENST00000544451 POLR3GO15318 223 aaPredicted RBP15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 GIGYF1O75420 1035 aaPredicted RBP15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 URI1O94763 535 aaPredicted RBP15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 CRB1P82279 1406 aa15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 KCNH5Q8NCM2 988 aa15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 ORC3Q9UBD5 711 aaPredicted RBP15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 CCDC57Q2TAC2 916 aa15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 KIF18AQ8NI77 898 aa15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 IP6K1Q92551 441 aa15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 PIK3C2BO00750 1634 aa15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 ARHGEF28Q8N1W1 1705 aaKnown RBP15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 ZSCAN25Q6NSZ9 544 aa15.45■□□□□ 0.06
PCMTD1-208ENST00000544451 AOX1Q06278 1338 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 LMTK2Q8IWU2 1503 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 AP5Z1O43299 807 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 GPTP24298 496 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 CCDC158Q5M9N0 1113 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms