RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 EIF2S2P20042 333 aaKnown RBP11.75□□□□□ -0.53
UBC-211ENST00000542416 GRAPQ13588 217 aa11.75□□□□□ -0.53
UBC-211ENST00000542416 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
UBC-211ENST00000542416 GRAPLQ8TC17 118 aaPredicted RBP11.75□□□□□ -0.53
UBC-211ENST00000542416 DPF2Q92785 391 aa11.75□□□□□ -0.53
UBC-211ENST00000542416 ZNF408Q9H9D4 720 aa11.75□□□□□ -0.53
UBC-211ENST00000542416 PCDH10Q9P2E7 1040 aa11.75□□□□□ -0.53
UBC-211ENST00000542416 CNOT7Q9UIV1 285 aaKnown RBP11.75□□□□□ -0.53
UBC-211ENST00000542416 COL4A5P29400 1685 aa11.75□□□□□ -0.53
UBC-211ENST00000542416 RAD17O75943 681 aa11.74□□□□□ -0.53
UBC-211ENST00000542416 LMOD3Q0VAK6 560 aa11.74□□□□□ -0.53
UBC-211ENST00000542416 PDIA6Q15084 440 aa11.74□□□□□ -0.53
UBC-211ENST00000542416 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
UBC-211ENST00000542416 MCOLN1Q9GZU1 580 aa11.74□□□□□ -0.53
UBC-211ENST00000542416 TRMT112Q9UI30 125 aaKnown RBP11.74□□□□□ -0.53
UBC-211ENST00000542416 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
UBC-211ENST00000542416 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
UBC-211ENST00000542416 CACNA1SQ13698 1873 aa11.74□□□□□ -0.53
UBC-211ENST00000542416 HIRAP54198 1017 aaPredicted RBP11.73□□□□□ -0.53
UBC-211ENST00000542416 HUNKP57058 714 aa11.73□□□□□ -0.53
UBC-211ENST00000542416 TCIRG1Q13488 830 aa11.73□□□□□ -0.53
UBC-211ENST00000542416 DGKZQ13574 1117 aa11.73□□□□□ -0.53
UBC-211ENST00000542416 LRP10Q7Z4F1 713 aa11.73□□□□□ -0.53
UBC-211ENST00000542416 NLRP10Q86W26 655 aa11.73□□□□□ -0.53
UBC-211ENST00000542416 CCDC102AQ96A19 550 aa11.73□□□□□ -0.53
UBC-211ENST00000542416 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
UBC-211ENST00000542416 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
UBC-211ENST00000542416 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
UBC-211ENST00000542416 RPS12P25398 132 aaKnown RBP11.72□□□□□ -0.53
UBC-211ENST00000542416 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
UBC-211ENST00000542416 COPS6Q7L5N1 327 aa11.72□□□□□ -0.53
UBC-211ENST00000542416 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
UBC-211ENST00000542416 C2orf69Q8N8R5 385 aa11.72□□□□□ -0.53
UBC-211ENST00000542416 TRPM4Q8TD43 1214 aa11.72□□□□□ -0.53
UBC-211ENST00000542416 DCPSQ96C86 337 aaKnown RBP11.72□□□□□ -0.53
UBC-211ENST00000542416 SAGE1Q9NXZ1 904 aa11.72□□□□□ -0.53
UBC-211ENST00000542416 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
UBC-211ENST00000542416 RIPK4P57078 832 aa11.71□□□□□ -0.53
UBC-211ENST00000542416 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.53
UBC-211ENST00000542416 RGMBQ6NW40 437 aa11.71□□□□□ -0.53
UBC-211ENST00000542416 KRT26Q7Z3Y9 468 aa11.71□□□□□ -0.53
UBC-211ENST00000542416 USP48Q86UV5 1035 aa11.71□□□□□ -0.53
UBC-211ENST00000542416 REM2Q8IYK8 340 aaPredicted RBP11.71□□□□□ -0.53
UBC-211ENST00000542416 EYA3Q99504 573 aa11.71□□□□□ -0.53
UBC-211ENST00000542416 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
UBC-211ENST00000542416 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
UBC-211ENST00000542416 XAGE3Q8WTP9 111 aa11.7□□□□□ -0.54
UBC-211ENST00000542416 GBA2Q9HCG7 927 aaPredicted RBP11.7□□□□□ -0.54
UBC-211ENST00000542416 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
UBC-211ENST00000542416 LAMB4A4D0S4 1761 aa11.69□□□□□ -0.54
UBC-211ENST00000542416 YDJCA8MPS7 323 aa11.69□□□□□ -0.54
UBC-211ENST00000542416 PSMD14O00487 310 aa11.69□□□□□ -0.54
UBC-211ENST00000542416 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
UBC-211ENST00000542416 PROSER3Q2NL68 480 aa11.69□□□□□ -0.54
UBC-211ENST00000542416 C6orf229H3BNL8 230 aa11.68□□□□□ -0.54
UBC-211ENST00000542416 ANXA1P04083 346 aa11.68□□□□□ -0.54
UBC-211ENST00000542416 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
UBC-211ENST00000542416 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
UBC-211ENST00000542416 SULF1Q8IWU6 871 aa11.68□□□□□ -0.54
UBC-211ENST00000542416 PLBD2Q8NHP8 589 aa11.68□□□□□ -0.54
UBC-211ENST00000542416 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
UBC-211ENST00000542416 G3V3G9 751 aa11.67□□□□□ -0.54
UBC-211ENST00000542416 HOXB7P09629 217 aa11.67□□□□□ -0.54
UBC-211ENST00000542416 TBC1D10BQ4KMP7 808 aaPredicted RBP11.67□□□□□ -0.54
UBC-211ENST00000542416 DCAF8Q5TAQ9 597 aa11.67□□□□□ -0.54
UBC-211ENST00000542416 ANKRD13DQ6ZTN6 518 aa11.67□□□□□ -0.54
UBC-211ENST00000542416 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
UBC-211ENST00000542416 ZC3H12CQ9C0D7 883 aaKnown RBP11.67□□□□□ -0.54
UBC-211ENST00000542416 DBNDD1Q9H9R9 158 aa11.67□□□□□ -0.54
UBC-211ENST00000542416 NUP98P52948 1817 aa11.67□□□□□ -0.54
UBC-211ENST00000542416 SHTN1A0MZ66 631 aa11.66□□□□□ -0.54
UBC-211ENST00000542416 FAM155AB1AL88 458 aaPredicted RBP11.66□□□□□ -0.54
UBC-211ENST00000542416 ECE2O60344 883 aa11.66□□□□□ -0.54
UBC-211ENST00000542416 TMPOP42166 694 aaKnown RBP11.66□□□□□ -0.54
UBC-211ENST00000542416 RPS8P62241 208 aaKnown RBP11.66□□□□□ -0.54
UBC-211ENST00000542416 FKBP1BP68106 108 aa11.66□□□□□ -0.54
UBC-211ENST00000542416 KIF23Q02241 960 aaPredicted RBP11.66□□□□□ -0.54
UBC-211ENST00000542416 TRIM28Q13263 835 aaKnown RBP11.66□□□□□ -0.54
UBC-211ENST00000542416 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
UBC-211ENST00000542416 ZIC5Q96T25 663 aa11.66□□□□□ -0.54
UBC-211ENST00000542416 DBF4Q9UBU7 674 aaPredicted RBP11.66□□□□□ -0.54
UBC-211ENST00000542416 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
UBC-211ENST00000542416 KDM3BQ7LBC6 1761 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 CHL1O00533 1208 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 RIMBP2O15034 1052 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 TRPA1O75762 1119 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 VIL1P09327 827 aaKnown RBP11.65□□□□□ -0.54
UBC-211ENST00000542416 KIF4BQ2VIQ3 1234 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 HDGFL1Q5TGJ6 251 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 CELF1Q92879 486 aaKnown RBP11.65□□□□□ -0.54
UBC-211ENST00000542416 FAM89AQ96GI7 184 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 ISCA1Q9BUE6 129 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 RNF186Q9NXI6 227 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 POLLQ9UGP5 575 aa11.65□□□□□ -0.54
UBC-211ENST00000542416 IRS4O14654 1257 aaPredicted RBP11.64□□□□□ -0.55
UBC-211ENST00000542416 SLC10A3P09131 477 aa11.64□□□□□ -0.55
UBC-211ENST00000542416 GPSM2P81274 684 aa11.64□□□□□ -0.55
UBC-211ENST00000542416 RALBP1Q15311 655 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms