RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 BRD1O95696 1058 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 HSP90AB3PQ58FF7 597 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 VPS53Q5VIR6 699 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
NECAP1-206ENST00000542095 NEUROD6Q96NK8 337 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 DNAJC2Q99543 621 aaKnown RBP13□□□□□ -0.33
NECAP1-206ENST00000542095 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 PDRG1Q9NUG6 133 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
NECAP1-206ENST00000542095 PSMA5P28066 241 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 ZBTB38Q8NAP3 1195 aaPredicted RBP13□□□□□ -0.33
NECAP1-206ENST00000542095 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
NECAP1-206ENST00000542095 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
NECAP1-206ENST00000542095 ARXQ96QS3 562 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 FBXO3Q9UK99 471 aa13□□□□□ -0.33
NECAP1-206ENST00000542095 THRAP3Q9Y2W1 955 aaKnown RBP13□□□□□ -0.33
NECAP1-206ENST00000542095 DDX49Q9Y6V7 483 aaKnown RBP13□□□□□ -0.33
NECAP1-206ENST00000542095 ADCK5Q3MIX3 580 aa12.99□□□□□ -0.33
NECAP1-206ENST00000542095 RUFY3Q7L099 469 aa12.99□□□□□ -0.33
NECAP1-206ENST00000542095 ZNF594Q96JF6 807 aaPredicted RBP12.99□□□□□ -0.33
NECAP1-206ENST00000542095 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
NECAP1-206ENST00000542095 SLC27A2O14975 620 aa12.99□□□□□ -0.33
NECAP1-206ENST00000542095 LRRC24Q50LG9 513 aa12.99□□□□□ -0.33
NECAP1-206ENST00000542095 TICAM2Q86XR7 235 aa12.99□□□□□ -0.33
NECAP1-206ENST00000542095 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
NECAP1-206ENST00000542095 LMBRD1Q9NUN5 540 aa12.99□□□□□ -0.33
NECAP1-206ENST00000542095 HMG20BQ9P0W2 317 aa12.99□□□□□ -0.33
NECAP1-206ENST00000542095 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
NECAP1-206ENST00000542095 RPAP1Q9BWH6 1393 aaPredicted RBP12.98□□□□□ -0.33
NECAP1-206ENST00000542095 SPATA31A1Q5TZJ5 1347 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
NECAP1-206ENST00000542095 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 BRPF3Q9ULD4 1205 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 PALLDQ8WX93 1383 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 ADAMTS2O95450 1211 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 CPA1P15085 419 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 PRIM1P49642 420 aaKnown RBP12.98□□□□□ -0.33
NECAP1-206ENST00000542095 KBTBD3Q8NAB2 608 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
NECAP1-206ENST00000542095 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
NECAP1-206ENST00000542095 WDR33Q9C0J8 1336 aaKnown RBP12.97□□□□□ -0.33
NECAP1-206ENST00000542095 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
NECAP1-206ENST00000542095 TAF5LO75529 589 aa12.97□□□□□ -0.33
NECAP1-206ENST00000542095 TIMM10P62072 90 aa12.97□□□□□ -0.33
NECAP1-206ENST00000542095 MCMDC2Q4G0Z9 681 aa12.97□□□□□ -0.33
NECAP1-206ENST00000542095 TAF7LQ5H9L4 462 aa12.97□□□□□ -0.33
NECAP1-206ENST00000542095 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
NECAP1-206ENST00000542095 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
NECAP1-206ENST00000542095 CSF1RP07333 972 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 MRE11P49959 708 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 IFIT5Q13325 482 aaKnown RBP12.96□□□□□ -0.33
NECAP1-206ENST00000542095 DDB1Q16531 1140 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 HLFQ16534 295 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 FOXD4L5Q5VV16 416 aaPredicted RBP12.96□□□□□ -0.33
NECAP1-206ENST00000542095 NLRP10Q86W26 655 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 FOXD4L4Q8WXT5 416 aaPredicted RBP12.96□□□□□ -0.33
NECAP1-206ENST00000542095 PUS3Q9BZE2 481 aaKnown RBP12.96□□□□□ -0.33
NECAP1-206ENST00000542095 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
NECAP1-206ENST00000542095 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 TCHHQ07283 1943 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 IL6STP40189 918 aaPredicted RBP12.96□□□□□ -0.33
NECAP1-206ENST00000542095 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
NECAP1-206ENST00000542095 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.33
NECAP1-206ENST00000542095 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
NECAP1-206ENST00000542095 PRPF40AO75400 957 aaKnown RBP12.95□□□□□ -0.34
NECAP1-206ENST00000542095 IFIT1P09914 478 aaKnown RBP12.95□□□□□ -0.34
NECAP1-206ENST00000542095 KRT32Q14532 448 aa12.95□□□□□ -0.34
NECAP1-206ENST00000542095 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
NECAP1-206ENST00000542095 SMC3Q9UQE7 1217 aa12.95□□□□□ -0.34
NECAP1-206ENST00000542095 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
NECAP1-206ENST00000542095 MYH7P12883 1935 aa12.95□□□□□ -0.34
NECAP1-206ENST00000542095 GOLIM4O00461 696 aa12.95□□□□□ -0.34
NECAP1-206ENST00000542095 XRCC6P12956 609 aaKnown RBP eCLIP12.95□□□□□ -0.34
NECAP1-206ENST00000542095 GPTP24298 496 aa12.95□□□□□ -0.34
NECAP1-206ENST00000542095 ANKRD1Q15327 319 aa12.95□□□□□ -0.34
NECAP1-206ENST00000542095 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
NECAP1-206ENST00000542095 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
NECAP1-206ENST00000542095 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
NECAP1-206ENST00000542095 ALDH8A1Q9H2A2 487 aaPredicted RBP12.94□□□□□ -0.34
NECAP1-206ENST00000542095 GRPEL1Q9HAV7 217 aa12.94□□□□□ -0.34
NECAP1-206ENST00000542095 HELLSQ9NRZ9 838 aa12.94□□□□□ -0.34
NECAP1-206ENST00000542095 LAMA4Q16363 1823 aa12.94□□□□□ -0.34
NECAP1-206ENST00000542095 LARGE1O95461 756 aa12.94□□□□□ -0.34
NECAP1-206ENST00000542095 NCLP19338 710 aaKnown RBP12.94□□□□□ -0.34
NECAP1-206ENST00000542095 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
NECAP1-206ENST00000542095 CCDC158Q5M9N0 1113 aa12.94□□□□□ -0.34
NECAP1-206ENST00000542095 RREB1Q92766 1687 aa12.94□□□□□ -0.34
NECAP1-206ENST00000542095 GORABQ5T7V8 394 aa12.93□□□□□ -0.34
NECAP1-206ENST00000542095 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
NECAP1-206ENST00000542095 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-206ENST00000542095 SPATA31A5Q5VU36 1347 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms