RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 NOP53Q9NZM5 478 aaKnown RBP7.42□□□□□ -1.22
SNHG1-217ENST00000541578 SLC6A14Q9UN76 642 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 RARAP10276 462 aa7.41□□□□□ -1.22
SNHG1-217ENST00000541578 PDIA4P13667 645 aaKnown RBP7.41□□□□□ -1.22
SNHG1-217ENST00000541578 COL8A1P27658 744 aa7.41□□□□□ -1.22
SNHG1-217ENST00000541578 ARID4AP29374 1257 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-217ENST00000541578 FAM26DQ5JW98 314 aa7.41□□□□□ -1.22
SNHG1-217ENST00000541578 ABTB2Q8N961 1025 aa7.41□□□□□ -1.22
SNHG1-217ENST00000541578 PRDM6Q9NQX0 595 aa7.41□□□□□ -1.22
SNHG1-217ENST00000541578 ZFATQ9P243 1243 aa7.41□□□□□ -1.22
SNHG1-217ENST00000541578 ALBP02768 609 aa7.4□□□□□ -1.22
SNHG1-217ENST00000541578 SCNN1AP37088 669 aa7.4□□□□□ -1.22
SNHG1-217ENST00000541578 ZAP70P43403 619 aa7.4□□□□□ -1.22
SNHG1-217ENST00000541578 TRIM11Q96F44 468 aa7.4□□□□□ -1.22
SNHG1-217ENST00000541578 PLVAPQ9BX97 442 aa7.4□□□□□ -1.22
SNHG1-217ENST00000541578 KCNMB2Q9Y691 235 aa7.4□□□□□ -1.22
SNHG1-217ENST00000541578 CARNS1A5YM72 827 aa7.39□□□□□ -1.23
SNHG1-217ENST00000541578 ZBTB39O15060 712 aa7.39□□□□□ -1.23
SNHG1-217ENST00000541578 C20orf204Q6ZNR8 217 aa7.39□□□□□ -1.23
SNHG1-217ENST00000541578 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
SNHG1-217ENST00000541578 HELQQ8TDG4 1101 aa7.39□□□□□ -1.23
SNHG1-217ENST00000541578 GTF3C2Q8WUA4 911 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-217ENST00000541578 USTQ9Y2C2 406 aa7.39□□□□□ -1.23
SNHG1-217ENST00000541578 ZBTB7CA1YPR0 619 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 SPDYE3A6NKU9 549 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 LILRB5O75023 590 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 GPAT2Q6NUI2 795 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 C8orf86Q6ZUL3 223 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 FAM35AQ86V20 835 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 TRPM4Q8TD43 1214 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 GPR152Q8TDT2 470 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 TLR7Q9NYK1 1049 aaKnown RBP7.38□□□□□ -1.23
SNHG1-217ENST00000541578 MTMR7Q9Y216 660 aa7.38□□□□□ -1.23
SNHG1-217ENST00000541578 FNDC3AQ9Y2H6 1198 aaKnown RBP7.38□□□□□ -1.23
SNHG1-217ENST00000541578 KRBA1A5PL33 1030 aa7.37□□□□□ -1.23
SNHG1-217ENST00000541578 UBAP1LF5GYI3 381 aa7.37□□□□□ -1.23
SNHG1-217ENST00000541578 RGS9O75916 674 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-217ENST00000541578 IGHA1P01876 353 aa7.37□□□□□ -1.23
SNHG1-217ENST00000541578 TRIM26Q12899 539 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-217ENST00000541578 PHLDB3Q6NSJ2 640 aa7.37□□□□□ -1.23
SNHG1-217ENST00000541578 PSAPL1Q6NUJ1 521 aa7.37□□□□□ -1.23
SNHG1-217ENST00000541578 NLRP13Q86W25 1043 aa7.37□□□□□ -1.23
SNHG1-217ENST00000541578 NUDT8Q8WV74 236 aa7.37□□□□□ -1.23
SNHG1-217ENST00000541578 JPH1Q9HDC5 661 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-217ENST00000541578 ZBTB42B2RXF5 422 aa7.36□□□□□ -1.23
SNHG1-217ENST00000541578 PSAPP07602 524 aa7.36□□□□□ -1.23
SNHG1-217ENST00000541578 CPB1P15086 417 aa7.36□□□□□ -1.23
SNHG1-217ENST00000541578 NRLP54845 237 aa7.36□□□□□ -1.23
SNHG1-217ENST00000541578 GPLD1P80108 840 aa7.36□□□□□ -1.23
SNHG1-217ENST00000541578 MLLT1Q03111 559 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-217ENST00000541578 COL9A3Q14050 684 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-217ENST00000541578 TRIP4Q15650 581 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-217ENST00000541578 PLA2G4EQ3MJ16 856 aa7.36□□□□□ -1.23
SNHG1-217ENST00000541578 B4GALNT3Q6L9W6 998 aa7.36□□□□□ -1.23
SNHG1-217ENST00000541578 MMP20O60882 483 aa7.35□□□□□ -1.23
SNHG1-217ENST00000541578 PLAURQ03405 335 aa7.35□□□□□ -1.23
SNHG1-217ENST00000541578 NOM1Q5C9Z4 860 aaKnown RBP7.35□□□□□ -1.23
SNHG1-217ENST00000541578 PRRT3Q5FWE3 981 aa7.35□□□□□ -1.23
SNHG1-217ENST00000541578 ELMSAN1Q6PJG2 1045 aa7.35□□□□□ -1.23
SNHG1-217ENST00000541578 NAGPAQ9UK23 515 aa7.35□□□□□ -1.23
SNHG1-217ENST00000541578 RPLP1P05386 114 aaKnown RBP7.34□□□□□ -1.23
SNHG1-217ENST00000541578 NID1P14543 1247 aa7.34□□□□□ -1.23
SNHG1-217ENST00000541578 PDE4CQ08493 712 aa7.34□□□□□ -1.23
SNHG1-217ENST00000541578 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
SNHG1-217ENST00000541578 TRAPPC3LQ5T215 181 aa7.34□□□□□ -1.23
SNHG1-217ENST00000541578 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.23
SNHG1-217ENST00000541578 ATCAYQ86WG3 371 aa7.34□□□□□ -1.23
SNHG1-217ENST00000541578 FRRS1LQ9P0K9 344 aa7.34□□□□□ -1.23
SNHG1-217ENST00000541578 LOC102724428A0A0B4J2F2 783 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 MSTNO14793 375 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 SPATA31C1P0DKV0 1188 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 PCSK2P16519 638 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 SOX18P35713 384 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
SNHG1-217ENST00000541578 SIK1P57059 783 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 MTMR3Q13615 1198 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 PERM1Q5SV97 790 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 TTC39BQ5VTQ0 682 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-217ENST00000541578 ALKBH2Q6NS38 261 aa7.33□□□□□ -1.24
SNHG1-217ENST00000541578 NUDT16Q96DE0 195 aaKnown RBP7.33□□□□□ -1.24
SNHG1-217ENST00000541578 FAM13AO94988 1023 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 ABL1P00519 1130 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 ITGB2P05107 769 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 HOXD8P13378 290 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-217ENST00000541578 EIF2AK2P19525 551 aaKnown RBP7.32□□□□□ -1.24
SNHG1-217ENST00000541578 MPSTP25325 297 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 EIF1AXP47813 144 aaKnown RBP7.32□□□□□ -1.24
SNHG1-217ENST00000541578 FKBP4Q02790 459 aaKnown RBP eCLIP7.32□□□□□ -1.24
SNHG1-217ENST00000541578 DNM1Q05193 864 aaKnown RBP7.32□□□□□ -1.24
SNHG1-217ENST00000541578 SF3B2Q13435 895 aaKnown RBP7.32□□□□□ -1.24
SNHG1-217ENST00000541578 AAMPQ13685 434 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 RETREG2Q8NC44 543 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 TTC16Q8NEE8 873 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 EDEM1Q92611 657 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 TTC9Q92623 222 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 LPIN3Q9BQK8 851 aa7.32□□□□□ -1.24
SNHG1-217ENST00000541578 J3QW42 95 aa7.31□□□□□ -1.24
SNHG1-217ENST00000541578 GHRHP01286 108 aa7.31□□□□□ -1.24
SNHG1-217ENST00000541578 NPR3P17342 541 aa7.31□□□□□ -1.24
SNHG1-217ENST00000541578 PDE12Q6L8Q7 609 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms