RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 NCAPGQ9BPX3 1015 aa17.46■□□□□ 0.39
HMGA2-210ENST00000541363 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-210ENST00000541363 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-210ENST00000541363 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-210ENST00000541363 CCDC85AQ96PX6 553 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-210ENST00000541363 TERF1P54274 439 aa17.46■□□□□ 0.39
HMGA2-210ENST00000541363 USH1CQ9Y6N9 552 aa17.46■□□□□ 0.39
HMGA2-210ENST00000541363 PDE1CQ14123 709 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-210ENST00000541363 PRR16Q569H4 304 aa17.46■□□□□ 0.38
HMGA2-210ENST00000541363 GOLGA1Q92805 767 aa17.46■□□□□ 0.38
HMGA2-210ENST00000541363 HAUS7Q99871 368 aa17.46■□□□□ 0.38
HMGA2-210ENST00000541363 PLCB3Q01970 1234 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 GJC1P36383 396 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 CUL4BQ13620 913 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 CCDC102BQ68D86 513 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 AFAP1L2Q8N4X5 818 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 KAT14Q9H8E8 782 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 MTRF1LQ9UGC7 380 aaKnown RBP17.45■□□□□ 0.38
HMGA2-210ENST00000541363 MGEA5O60502 916 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 CCDC170Q8IYT3 715 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.45■□□□□ 0.38
HMGA2-210ENST00000541363 RPGRIP1LQ68CZ1 1315 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 PPFIA2O75334 1257 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 NEDD9Q14511 834 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 TMCO4Q5TGY1 634 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 RAPGEF2Q9Y4G8 1499 aa17.45■□□□□ 0.38
HMGA2-210ENST00000541363 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 RPAP2Q8IXW5 612 aaPredicted RBP17.44■□□□□ 0.38
HMGA2-210ENST00000541363 RPGRQ92834 1020 aaKnown RBP17.44■□□□□ 0.38
HMGA2-210ENST00000541363 VCXQ9H320 206 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 PPP1R7Q15435 360 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 ISM2Q6H9L7 571 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 NBPF11Q86T75 865 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 CDCA7LQ96GN5 454 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 MAP7Q14244 749 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
HMGA2-210ENST00000541363 STAT6P42226 847 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 PDE4BQ07343 736 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 ERCC5P28715 1186 aaPredicted RBP17.44■□□□□ 0.38
HMGA2-210ENST00000541363 PCK1P35558 622 aa17.44■□□□□ 0.38
HMGA2-210ENST00000541363 ZEB2O60315 1214 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 MX1P20591 662 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 PPP2R1AP30153 589 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 CCT2P78371 535 aaKnown RBP17.43■□□□□ 0.38
HMGA2-210ENST00000541363 A0A1B0GUA9 196 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 SMIM23A6NLE4 172 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
HMGA2-210ENST00000541363 BOLA2Q9H3K6 86 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 ARID4AP29374 1257 aaPredicted RBP17.43■□□□□ 0.38
HMGA2-210ENST00000541363 FYB2Q5VWT5 728 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 TBC1D31Q96DN5 1066 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 SUDS3Q9H7L9 328 aaPredicted RBP17.43■□□□□ 0.38
HMGA2-210ENST00000541363 VAT1LQ9HCJ6 419 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 CABP5Q9NP86 173 aa17.43■□□□□ 0.38
HMGA2-210ENST00000541363 TAF12Q16514 161 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 FAM13AO94988 1023 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 TMEM67Q5HYA8 995 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 SH2D4BQ5SQS7 431 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 VTI1AQ96AJ9 217 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 CUX1P39880 1505 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 KRT83P78385 493 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 VPS18Q9P253 973 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 GKAP1Q5VSY0 366 aaPredicted RBP17.42■□□□□ 0.38
HMGA2-210ENST00000541363 CCDC89Q8N998 374 aa17.42■□□□□ 0.38
HMGA2-210ENST00000541363 HLA-DOAP06340 250 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 ZNF165P49910 485 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 DPH6Q7L8W6 267 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 CCDC25Q86WR0 208 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 CCDC65Q8IXS2 484 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 TSGA10Q9BZW7 698 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 FCHSD2O94868 740 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 HSPA1LP34931 641 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 ARFGAP2Q8N6H7 521 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 IFIT5Q13325 482 aaKnown RBP17.41■□□□□ 0.38
HMGA2-210ENST00000541363 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
HMGA2-210ENST00000541363 TCHPQ9BT92 498 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 GIPC1O14908 333 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
HMGA2-210ENST00000541363 CLUL1Q15846 466 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 SDCCAG8Q86SQ7 713 aaPredicted RBP17.41■□□□□ 0.38
HMGA2-210ENST00000541363 NKIRAS1Q9NYS0 192 aa17.41■□□□□ 0.38
HMGA2-210ENST00000541363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.4■□□□□ 0.38
HMGA2-210ENST00000541363 UBE2HP62256 183 aa17.4■□□□□ 0.38
HMGA2-210ENST00000541363 GABPB2Q8TAK5 448 aaPredicted RBP17.4■□□□□ 0.38
HMGA2-210ENST00000541363 TRPC3Q13507 836 aa17.4■□□□□ 0.38
HMGA2-210ENST00000541363 RRAGBQ5VZM2 374 aa17.4■□□□□ 0.38
HMGA2-210ENST00000541363 KRT86O43790 486 aa17.4■□□□□ 0.38
HMGA2-210ENST00000541363 GJB2P29033 226 aa17.4■□□□□ 0.38
HMGA2-210ENST00000541363 GPR161Q8N6U8 529 aaKnown RBP17.4■□□□□ 0.38
HMGA2-210ENST00000541363 B4GALNT4Q76KP1 1039 aa17.4■□□□□ 0.38
HMGA2-210ENST00000541363 ATP6V0A2Q9Y487 856 aa17.4■□□□□ 0.38
HMGA2-210ENST00000541363 PROSER2Q86WR7 435 aaPredicted RBP17.4■□□□□ 0.38
HMGA2-210ENST00000541363 BAG3O95817 575 aa17.39■□□□□ 0.38
HMGA2-210ENST00000541363 METAP2P50579 478 aaKnown RBP eCLIP17.39■□□□□ 0.37
HMGA2-210ENST00000541363 FAM76AQ8TAV0 307 aa17.39■□□□□ 0.37
HMGA2-210ENST00000541363 UBLCP1Q8WVY7 318 aaPredicted RBP17.39■□□□□ 0.37
HMGA2-210ENST00000541363 SYKP43405 635 aa17.39■□□□□ 0.37
HMGA2-210ENST00000541363 INF2Q27J81 1249 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 206.3 ms