RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 FAM173BQ6P4H8 233 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 MAGEB6Q8N7X4 407 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 TRIM5Q9C035 493 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 TLR7Q9NYK1 1049 aaKnown RBP11.24□□□□□ -0.61
TTC39C-203ENST00000540918 PRDM1O75626 825 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
TTC39C-203ENST00000540918 RTL1A6NKG5 1358 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 EYA2O00167 538 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 TNNI3KQ59H18 835 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 SLC4A4Q9Y6R1 1079 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 FPGT-TNNI3KV9GXZ4 949 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 ABCC4O15439 1325 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 SH3TC1Q8TE82 1336 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
TTC39C-203ENST00000540918 TRAPPC3LQ5T215 181 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 CRACR2BQ8N4Y2 399 aaPredicted RBP11.23□□□□□ -0.61
TTC39C-203ENST00000540918 USP26Q9BXU7 913 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 AK2P54819 239 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 MCMDC2Q4G0Z9 681 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 TMEM67Q5HYA8 995 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 PIGBQ92521 554 aa11.23□□□□□ -0.61
TTC39C-203ENST00000540918 AATKQ6ZMQ8 1374 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 ZNF853P0CG23 659 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 Q6ZUG5 572 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 HOMER1Q86YM7 354 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 TNMDQ9H2S6 317 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 SSBP05455 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
TTC39C-203ENST00000540918 XAGE2Q96GT9 111 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 SLC12A7Q9Y666 1083 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 APOBRQ0VD83 1088 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
TTC39C-203ENST00000540918 TTLL5Q6EMB2 1281 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 PDILTQ8N807 584 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 C8orf76Q96K31 380 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 ZSCAN31Q96LW9 406 aaPredicted RBP11.22□□□□□ -0.61
TTC39C-203ENST00000540918 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 MADDQ8WXG6 1647 aa11.22□□□□□ -0.61
TTC39C-203ENST00000540918 PPRC1Q5VV67 1664 aaKnown RBP11.22□□□□□ -0.61
TTC39C-203ENST00000540918 TSPY2A6NKD2 308 aa11.21□□□□□ -0.61
TTC39C-203ENST00000540918 UNC13BO14795 1591 aa11.21□□□□□ -0.61
TTC39C-203ENST00000540918 ADGRL3Q9HAR2 1447 aa11.21□□□□□ -0.61
TTC39C-203ENST00000540918 TRIM37O94972 964 aa11.21□□□□□ -0.61
TTC39C-203ENST00000540918 PI16Q6UXB8 463 aa11.21□□□□□ -0.61
TTC39C-203ENST00000540918 GLI2P10070 1586 aa11.21□□□□□ -0.61
TTC39C-203ENST00000540918 LOC102724428A0A0B4J2F2 783 aa11.21□□□□□ -0.62
TTC39C-203ENST00000540918 BIN1O00499 593 aa11.21□□□□□ -0.62
TTC39C-203ENST00000540918 KCNQ2O43526 872 aa11.21□□□□□ -0.62
TTC39C-203ENST00000540918 BAG4O95429 457 aaKnown RBP11.21□□□□□ -0.62
TTC39C-203ENST00000540918 MBD3O95983 291 aa11.21□□□□□ -0.62
TTC39C-203ENST00000540918 SIK1P57059 783 aa11.21□□□□□ -0.62
TTC39C-203ENST00000540918 SLFNL1Q499Z3 407 aa11.21□□□□□ -0.62
TTC39C-203ENST00000540918 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.62
TTC39C-203ENST00000540918 CCDC191Q8NCU4 936 aa11.21□□□□□ -0.62
TTC39C-203ENST00000540918 DIP2CQ9Y2E4 1556 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 GOLGA8AA7E2F4 631 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 STX6O43752 255 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 ZAP70P43403 619 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 MRE11P49959 708 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 CREB3L3Q68CJ9 461 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 MFSD6Q6ZSS7 791 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 ORC3Q9UBD5 711 aaPredicted RBP11.2□□□□□ -0.62
TTC39C-203ENST00000540918 WDR17Q8IZU2 1322 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 APBA3O96018 575 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 SPHKAPQ2M3C7 1700 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 SPATA31A3Q5VYP0 1347 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 ATP7BP35670 1465 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 ARAP3Q8WWN8 1544 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 SMC2O95347 1197 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 TCIRG1Q13488 830 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 NAA16Q6N069 864 aaPredicted RBP11.2□□□□□ -0.62
TTC39C-203ENST00000540918 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 TSPY26PQ9H489 355 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 NCOA5Q9HCD5 579 aaKnown RBP11.2□□□□□ -0.62
TTC39C-203ENST00000540918 SYNMO15061 1565 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 GREM2Q9H772 168 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 GRPEL1Q9HAV7 217 aa11.2□□□□□ -0.62
TTC39C-203ENST00000540918 ABCA6Q8N139 1617 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 ZNF396Q96N95 335 aaPredicted RBP11.19□□□□□ -0.62
TTC39C-203ENST00000540918 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 QTRT2Q9H974 415 aaKnown RBP11.19□□□□□ -0.62
TTC39C-203ENST00000540918 CNPY2Q9Y2B0 182 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 SHROOM2Q13796 1616 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 ST5P78524 1137 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 IQCA1Q86XH1 822 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 CNBD1Q8NA66 436 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 ARMT1Q9H993 441 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 KIDINS220Q9ULH0 1771 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 ERVV-2B6SEH9 535 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 MBD4O95243 580 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 MYL10Q9BUA6 226 aa11.19□□□□□ -0.62
TTC39C-203ENST00000540918 HOXB7P09629 217 aa11.18□□□□□ -0.62
TTC39C-203ENST00000540918 GYG1P46976 350 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms