RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 DOT1LQ8TEK3 1739 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 BRPF3Q9ULD4 1205 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 LIMCH1Q9UPQ0 1083 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 MAP3K15Q6ZN16 1313 aa11.49□□□□□ -0.57
LCOR-209ENST00000540664 CYP19A1P11511 503 aaPredicted RBP11.49□□□□□ -0.57
LCOR-209ENST00000540664 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
LCOR-209ENST00000540664 TSGA10IPQ3SY00 556 aa11.49□□□□□ -0.57
LCOR-209ENST00000540664 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
LCOR-209ENST00000540664 MCTP1Q6DN14 999 aa11.49□□□□□ -0.57
LCOR-209ENST00000540664 CICQ96RK0 1608 aaPredicted RBP11.49□□□□□ -0.57
LCOR-209ENST00000540664 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 EXOC5O00471 708 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 SLC27A2O14975 620 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 TAF5LO75529 589 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 CSF1RP07333 972 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 XRCC6P12956 609 aaKnown RBP eCLIP11.48□□□□□ -0.57
LCOR-209ENST00000540664 GIGYF2Q6Y7W6 1299 aaKnown RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 ZNF589Q86UQ0 364 aaPredicted RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 EDC3Q96F86 508 aaKnown RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 CDCA7Q9BWT1 371 aaPredicted RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 ALDH8A1Q9H2A2 487 aaPredicted RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 PALLDQ8WX93 1383 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 SPATA31A1Q5TZJ5 1347 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 CDHR2Q9BYE9 1310 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 NOL8Q76FK4 1167 aaKnown RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 ZBTB38Q8NAP3 1195 aaPredicted RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 JAKMIP1Q96N16 626 aaKnown RBP11.48□□□□□ -0.57
LCOR-209ENST00000540664 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 CYP46A1Q9Y6A2 500 aa11.48□□□□□ -0.57
LCOR-209ENST00000540664 LRRC24Q50LG9 513 aa11.47□□□□□ -0.57
LCOR-209ENST00000540664 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
LCOR-209ENST00000540664 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
LCOR-209ENST00000540664 HMG20BQ9P0W2 317 aa11.47□□□□□ -0.57
LCOR-209ENST00000540664 THRAP3Q9Y2W1 955 aaKnown RBP11.47□□□□□ -0.57
LCOR-209ENST00000540664 RREB1Q92766 1687 aa11.47□□□□□ -0.57
LCOR-209ENST00000540664 CPA1P15085 419 aa11.47□□□□□ -0.57
LCOR-209ENST00000540664 MRE11P49959 708 aa11.47□□□□□ -0.57
LCOR-209ENST00000540664 ZSCAN31Q96LW9 406 aaPredicted RBP11.47□□□□□ -0.57
LCOR-209ENST00000540664 PDRG1Q9NUG6 133 aa11.47□□□□□ -0.57
LCOR-209ENST00000540664 DDX49Q9Y6V7 483 aaKnown RBP11.47□□□□□ -0.57
LCOR-209ENST00000540664 SLIT2O94813 1529 aa11.46□□□□□ -0.57
LCOR-209ENST00000540664 SH3TC1Q8TE82 1336 aa11.46□□□□□ -0.57
LCOR-209ENST00000540664 NUP98P52948 1817 aa11.46□□□□□ -0.57
LCOR-209ENST00000540664 PSMA5P28066 241 aa11.46□□□□□ -0.57
LCOR-209ENST00000540664 HSP90AB3PQ58FF7 597 aa11.46□□□□□ -0.57
LCOR-209ENST00000540664 RNF20Q5VTR2 975 aa11.46□□□□□ -0.57
LCOR-209ENST00000540664 ZNF594Q96JF6 807 aaPredicted RBP11.46□□□□□ -0.57
LCOR-209ENST00000540664 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
LCOR-209ENST00000540664 UBAP1LF5GYI3 381 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 HLFQ16534 295 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 PUS3Q9BZE2 481 aaKnown RBP11.45□□□□□ -0.58
LCOR-209ENST00000540664 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.45□□□□□ -0.58
LCOR-209ENST00000540664 KAT6BQ8WYB5 2073 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 WDR33Q9C0J8 1336 aaKnown RBP11.45□□□□□ -0.58
LCOR-209ENST00000540664 A0A1B0GUL7 405 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 ERVV-1B6SEH8 477 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 LARGE1O95461 756 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 IL6STP40189 918 aaPredicted RBP11.45□□□□□ -0.58
LCOR-209ENST00000540664 TIMM10P62072 90 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 MCMDC2Q4G0Z9 681 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 GAS2L3Q86XJ1 694 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 DNAJC2Q99543 621 aaKnown RBP11.45□□□□□ -0.58
LCOR-209ENST00000540664 ZBTB1Q9Y2K1 713 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 NDUFB9Q9Y6M9 179 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 SPATA31A5Q5VU36 1347 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 SPATA31A7Q8IWB4 1347 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 MYH3P11055 1940 aa11.45□□□□□ -0.58
LCOR-209ENST00000540664 KCNJ4P48050 445 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 ST3GAL1Q11201 340 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 CCDC57Q2TAC2 916 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 GRPEL1Q9HAV7 217 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 PAG1Q9NWQ8 432 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 RIC1Q4ADV7 1423 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 PRPF40AO75400 957 aaKnown RBP11.44□□□□□ -0.58
LCOR-209ENST00000540664 PRIM1P49642 420 aaKnown RBP11.44□□□□□ -0.58
LCOR-209ENST00000540664 ZNF445P59923 1031 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 DDX46Q7L014 1031 aaKnown RBP11.44□□□□□ -0.58
LCOR-209ENST00000540664 GPT2Q8TD30 523 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 HELLSQ9NRZ9 838 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 TAF6LQ9Y6J9 622 aa11.44□□□□□ -0.58
LCOR-209ENST00000540664 LRP5O75197 1615 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 CHGBP05060 677 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 RPS6KB1P23443 525 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 COL9A3Q14050 684 aaPredicted RBP11.43□□□□□ -0.58
LCOR-209ENST00000540664 DDB1Q16531 1140 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 CHAMP1Q96JM3 812 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 CEP126Q9P2H0 1117 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 ZNF330Q9Y3S2 320 aaPredicted RBP11.43□□□□□ -0.58
LCOR-209ENST00000540664 U3KPZ7 1027 aaPredicted RBP11.43□□□□□ -0.58
LCOR-209ENST00000540664 ABCC12Q96J65 1359 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 KRT32Q14532 448 aa11.43□□□□□ -0.58
LCOR-209ENST00000540664 ME3Q16798 604 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms