RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ZNF428Q96B54 188 aa10.69□□□□□ -0.7
LRP6-204ENST00000540415 CSRNP1Q96S65 589 aa10.69□□□□□ -0.7
LRP6-204ENST00000540415 GBA2Q9HCG7 927 aaPredicted RBP10.69□□□□□ -0.7
LRP6-204ENST00000540415 ASTN2O75129 1339 aaPredicted RBP10.68□□□□□ -0.7
LRP6-204ENST00000540415 CDHR2Q9BYE9 1310 aa10.68□□□□□ -0.7
LRP6-204ENST00000540415 ZNF157P51786 506 aaPredicted RBP10.68□□□□□ -0.7
LRP6-204ENST00000540415 TAF7Q15545 349 aaPredicted RBP10.68□□□□□ -0.7
LRP6-204ENST00000540415 RBM26Q5T8P6 1007 aaKnown RBP10.68□□□□□ -0.7
LRP6-204ENST00000540415 KRT26Q7Z3Y9 468 aa10.68□□□□□ -0.7
LRP6-204ENST00000540415 CTU1Q7Z7A3 348 aaKnown RBP10.68□□□□□ -0.7
LRP6-204ENST00000540415 MPNDQ8N594 471 aa10.68□□□□□ -0.7
LRP6-204ENST00000540415 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
LRP6-204ENST00000540415 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
LRP6-204ENST00000540415 KCNQ5Q9NR82 932 aa10.68□□□□□ -0.7
LRP6-204ENST00000540415 SAGE1Q9NXZ1 904 aa10.68□□□□□ -0.7
LRP6-204ENST00000540415 HPS5Q9UPZ3 1129 aa10.68□□□□□ -0.7
LRP6-204ENST00000540415 PSMD14O00487 310 aa10.67□□□□□ -0.7
LRP6-204ENST00000540415 U2AF1L5P0DN76 240 aaPredicted RBP10.67□□□□□ -0.7
LRP6-204ENST00000540415 HCLS1P14317 486 aaPredicted RBP10.67□□□□□ -0.7
LRP6-204ENST00000540415 U2AF1Q01081 240 aaKnown RBP eCLIP10.67□□□□□ -0.7
LRP6-204ENST00000540415 TNIP1Q15025 636 aa10.67□□□□□ -0.7
LRP6-204ENST00000540415 SUPT20HQ8NEM7 779 aa10.67□□□□□ -0.7
LRP6-204ENST00000540415 PCGF6Q9BYE7 350 aa10.67□□□□□ -0.7
LRP6-204ENST00000540415 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
LRP6-204ENST00000540415 DUOX1Q9NRD9 1551 aa10.66□□□□□ -0.7
LRP6-204ENST00000540415 H7C1D1 291 aa10.66□□□□□ -0.7
LRP6-204ENST00000540415 ANXA1P04083 346 aa10.66□□□□□ -0.7
LRP6-204ENST00000540415 SLC10A3P09131 477 aa10.66□□□□□ -0.7
LRP6-204ENST00000540415 EIF4A1P60842 406 aaKnown RBP10.66□□□□□ -0.7
LRP6-204ENST00000540415 SLC10A5Q5PT55 438 aa10.66□□□□□ -0.7
LRP6-204ENST00000540415 GIGYF2Q6Y7W6 1299 aaKnown RBP10.66□□□□□ -0.7
LRP6-204ENST00000540415 SP8Q8IXZ3 490 aa10.66□□□□□ -0.7
LRP6-204ENST00000540415 C2orf69Q8N8R5 385 aa10.66□□□□□ -0.7
LRP6-204ENST00000540415 TMX4Q9H1E5 349 aaPredicted RBP10.66□□□□□ -0.7
LRP6-204ENST00000540415 DBNDD1Q9H9R9 158 aa10.66□□□□□ -0.7
LRP6-204ENST00000540415 MKI67P46013 3256 aaKnown RBP10.66□□□□□ -0.7
LRP6-204ENST00000540415 PROSER3Q2NL68 480 aa10.65□□□□□ -0.7
LRP6-204ENST00000540415 LRP10Q7Z4F1 713 aa10.65□□□□□ -0.7
LRP6-204ENST00000540415 PPP1R42Q7Z4L9 355 aa10.65□□□□□ -0.7
LRP6-204ENST00000540415 CCDC102AQ96A19 550 aa10.65□□□□□ -0.7
LRP6-204ENST00000540415 UTP14AQ9BVJ6 771 aaKnown RBP10.65□□□□□ -0.7
LRP6-204ENST00000540415 RTL9Q8NET4 1388 aa10.65□□□□□ -0.71
LRP6-204ENST00000540415 NUP98P52948 1817 aa10.64□□□□□ -0.71
LRP6-204ENST00000540415 RIMBP2O15034 1052 aa10.64□□□□□ -0.71
LRP6-204ENST00000540415 BBOX1O75936 387 aa10.64□□□□□ -0.71
LRP6-204ENST00000540415 PDIA6Q15084 440 aa10.64□□□□□ -0.71
LRP6-204ENST00000540415 PARP10Q53GL7 1025 aa10.64□□□□□ -0.71
LRP6-204ENST00000540415 RASAL3Q86YV0 1011 aa10.64□□□□□ -0.71
LRP6-204ENST00000540415 GGA3Q9NZ52 723 aa10.64□□□□□ -0.71
LRP6-204ENST00000540415 SCAF8Q9UPN6 1271 aaKnown RBP10.64□□□□□ -0.71
LRP6-204ENST00000540415 LAMB4A4D0S4 1761 aa10.64□□□□□ -0.71
LRP6-204ENST00000540415 COL4A1P02462 1669 aa10.63□□□□□ -0.71
LRP6-204ENST00000540415 HTTP42858 3142 aa10.63□□□□□ -0.71
LRP6-204ENST00000540415 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
LRP6-204ENST00000540415 TBC1D8O95759 1140 aa10.63□□□□□ -0.71
LRP6-204ENST00000540415 GRAPQ13588 217 aa10.63□□□□□ -0.71
LRP6-204ENST00000540415 DOK7Q18PE1 504 aa10.63□□□□□ -0.71
LRP6-204ENST00000540415 MOB2Q70IA6 237 aa10.63□□□□□ -0.71
LRP6-204ENST00000540415 GRAPLQ8TC17 118 aaPredicted RBP10.63□□□□□ -0.71
LRP6-204ENST00000540415 ZNF296Q8WUU4 475 aaPredicted RBP10.63□□□□□ -0.71
LRP6-204ENST00000540415 DPF2Q92785 391 aa10.63□□□□□ -0.71
LRP6-204ENST00000540415 DCPSQ96C86 337 aaKnown RBP10.63□□□□□ -0.71
LRP6-204ENST00000540415 CDCA5Q96FF9 252 aa10.63□□□□□ -0.71
LRP6-204ENST00000540415 TRIM26Q12899 539 aaPredicted RBP10.62□□□□□ -0.71
LRP6-204ENST00000540415 KIF4BQ2VIQ3 1234 aa10.62□□□□□ -0.71
LRP6-204ENST00000540415 DDX46Q7L014 1031 aaKnown RBP10.62□□□□□ -0.71
LRP6-204ENST00000540415 NLRP10Q86W26 655 aa10.62□□□□□ -0.71
LRP6-204ENST00000540415 CFAP53Q96M91 514 aa10.62□□□□□ -0.71
LRP6-204ENST00000540415 POLLQ9UGP5 575 aa10.62□□□□□ -0.71
LRP6-204ENST00000540415 NUDCQ9Y266 331 aa10.62□□□□□ -0.71
LRP6-204ENST00000540415 ECE2O60344 883 aa10.61□□□□□ -0.71
LRP6-204ENST00000540415 EIF2S2P20042 333 aaKnown RBP10.61□□□□□ -0.71
LRP6-204ENST00000540415 GPSM2P81274 684 aa10.61□□□□□ -0.71
LRP6-204ENST00000540415 WASHC4Q2M389 1173 aa10.61□□□□□ -0.71
LRP6-204ENST00000540415 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
LRP6-204ENST00000540415 CELF1Q92879 486 aaKnown RBP10.61□□□□□ -0.71
LRP6-204ENST00000540415 R3HDMLQ9H3Y0 253 aa10.61□□□□□ -0.71
LRP6-204ENST00000540415 NSFL1CQ9UNZ2 370 aaKnown RBP10.61□□□□□ -0.71
LRP6-204ENST00000540415 CLSPNQ9HAW4 1339 aa10.6□□□□□ -0.71
LRP6-204ENST00000540415 C6orf229H3BNL8 230 aa10.6□□□□□ -0.71
LRP6-204ENST00000540415 PPP2R1AP30153 589 aa10.6□□□□□ -0.71
LRP6-204ENST00000540415 AIMP1Q12904 312 aaKnown RBP10.6□□□□□ -0.71
LRP6-204ENST00000540415 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
LRP6-204ENST00000540415 ANGEL2Q5VTE6 544 aaKnown RBP10.6□□□□□ -0.71
LRP6-204ENST00000540415 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
LRP6-204ENST00000540415 SULF1Q8IWU6 871 aa10.6□□□□□ -0.71
LRP6-204ENST00000540415 NECTIN2Q92692 538 aa10.6□□□□□ -0.71
LRP6-204ENST00000540415 TRMT112Q9UI30 125 aaKnown RBP10.6□□□□□ -0.71
LRP6-204ENST00000540415 HDAC9Q9UKV0 1011 aa10.6□□□□□ -0.71
LRP6-204ENST00000540415 KDM3BQ7LBC6 1761 aa10.6□□□□□ -0.71
LRP6-204ENST00000540415 BRCA2P51587 3418 aa10.59□□□□□ -0.71
LRP6-204ENST00000540415 UBE2Q2LH0YL09 131 aa10.59□□□□□ -0.71
LRP6-204ENST00000540415 SCARF1Q14162 830 aa10.59□□□□□ -0.71
LRP6-204ENST00000540415 PNISRQ8TF01 805 aaKnown RBP10.59□□□□□ -0.71
LRP6-204ENST00000540415 LAMB2P55268 1798 aa10.58□□□□□ -0.72
LRP6-204ENST00000540415 RPS12P25398 132 aaKnown RBP10.58□□□□□ -0.72
LRP6-204ENST00000540415 COPS6Q7L5N1 327 aa10.58□□□□□ -0.72
LRP6-204ENST00000540415 XAGE3Q8WTP9 111 aa10.58□□□□□ -0.72
LRP6-204ENST00000540415 CENPFP49454 3210 aa10.58□□□□□ -0.72
LRP6-204ENST00000540415 ERBB4Q15303 1308 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms