RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 CRYBG1Q9Y4K1 1723 aa24.07■■□□□ 1.44
TMEM260-203ENST00000539559 U2AF2P26368 475 aaKnown RBP eCLIP24.07■■□□□ 1.443e-6■■■■□ 23.8
TMEM260-203ENST00000539559 CHAF1AQ13111 956 aaPredicted RBP24.07■■□□□ 1.44
TMEM260-203ENST00000539559 BLOC1S2Q6QNY1 142 aa24.07■■□□□ 1.44
TMEM260-203ENST00000539559 GOLGA6L6A8MZA4 724 aa24.07■■□□□ 1.44
TMEM260-203ENST00000539559 NR1I2O75469 434 aa24.07■■□□□ 1.44
TMEM260-203ENST00000539559 FOSBP53539 338 aa24.07■■□□□ 1.44
TMEM260-203ENST00000539559 TOB2Q14106 344 aaPredicted RBP24.07■■□□□ 1.44
TMEM260-203ENST00000539559 PDCL2Q8N4E4 241 aa24.07■■□□□ 1.44
TMEM260-203ENST00000539559 ZNF530Q6P9A1 599 aaPredicted RBP24.06■■□□□ 1.44
TMEM260-203ENST00000539559 KAZALD1Q96I82 304 aa24.06■■□□□ 1.44
TMEM260-203ENST00000539559 TRIM5Q9C035 493 aa24.06■■□□□ 1.44
TMEM260-203ENST00000539559 BICC1Q9H694 974 aaKnown RBP24.06■■□□□ 1.44
TMEM260-203ENST00000539559 DNAJC25Q9H1X3 360 aa24.06■■□□□ 1.44
TMEM260-203ENST00000539559 CEBPZQ03701 1054 aaKnown RBP24.05■■□□□ 1.44
TMEM260-203ENST00000539559 MTX1Q13505 466 aa24.05■■□□□ 1.44
TMEM260-203ENST00000539559 NAA30Q147X3 362 aaPredicted RBP24.05■■□□□ 1.44
TMEM260-203ENST00000539559 LEO1Q8WVC0 666 aaPredicted RBP24.05■■□□□ 1.44
TMEM260-203ENST00000539559 NPHP3Q7Z494 1330 aa24.04■■□□□ 1.44
TMEM260-203ENST00000539559 IGSF3O75054 1194 aa24.04■■□□□ 1.44
TMEM260-203ENST00000539559 PGBD1Q96JS3 809 aa24.04■■□□□ 1.44
TMEM260-203ENST00000539559 LMTK3Q96Q04 1460 aa24.04■■□□□ 1.44
TMEM260-203ENST00000539559 A0A087WWV3 80 aa24.04■■□□□ 1.44
TMEM260-203ENST00000539559 BICD2Q8TD16 824 aa24.04■■□□□ 1.44
TMEM260-203ENST00000539559 ANKRD24Q8TF21 1146 aa24.04■■□□□ 1.44
TMEM260-203ENST00000539559 DBF4Q9UBU7 674 aaPredicted RBP24.04■■□□□ 1.44
TMEM260-203ENST00000539559 PPFIA3O75145 1194 aa24.03■■□□□ 1.44
TMEM260-203ENST00000539559 RPS6KB1P23443 525 aa24.03■■□□□ 1.44
TMEM260-203ENST00000539559 G3BP1Q13283 466 aaKnown RBP eCLIP24.03■■□□□ 1.44
TMEM260-203ENST00000539559 DDX17Q92841 729 aaKnown RBP24.03■■□□□ 1.44
TMEM260-203ENST00000539559 LRRC2Q9BYS8 371 aa24.02■■□□□ 1.44
TMEM260-203ENST00000539559 ALS2Q96Q42 1657 aa24.02■■□□□ 1.44
TMEM260-203ENST00000539559 PSMA5P28066 241 aa24.02■■□□□ 1.44
TMEM260-203ENST00000539559 DMTNQ08495 405 aa24.01■■□□□ 1.43
TMEM260-203ENST00000539559 TPM3P06753 285 aa24.01■■□□□ 1.43
TMEM260-203ENST00000539559 KSR2Q6VAB6 950 aa24.01■■□□□ 1.43
TMEM260-203ENST00000539559 ERC1Q8IUD2 1116 aa24.01■■□□□ 1.43
TMEM260-203ENST00000539559 ZNF75DP51815 510 aa24■■□□□ 1.43
TMEM260-203ENST00000539559 CCDC144BQ3MJ40 725 aa24■■□□□ 1.43
TMEM260-203ENST00000539559 PLEKHO1Q53GL0 409 aaPredicted RBP24■■□□□ 1.43
TMEM260-203ENST00000539559 CCDC144CPQ8IYA2 1237 aa24■■□□□ 1.43
TMEM260-203ENST00000539559 AXIN2Q9Y2T1 843 aa24■■□□□ 1.43
TMEM260-203ENST00000539559 ELP1O95163 1332 aa24■■□□□ 1.43
TMEM260-203ENST00000539559 ZNF165P49910 485 aa24■■□□□ 1.43
TMEM260-203ENST00000539559 ZC3H6P61129 1189 aaKnown RBP24■■□□□ 1.43
TMEM260-203ENST00000539559 CCDC129Q6ZRS4 1044 aa24■■□□□ 1.43
TMEM260-203ENST00000539559 CCDC9Q9Y3X0 531 aaKnown RBP24■■□□□ 1.43
TMEM260-203ENST00000539559 PDCP20941 246 aa23.99■■□□□ 1.43
TMEM260-203ENST00000539559 ARID5BQ14865 1188 aa23.99■■□□□ 1.43
TMEM260-203ENST00000539559 ZSCAN25Q6NSZ9 544 aa23.99■■□□□ 1.43
TMEM260-203ENST00000539559 GRM8O00222 908 aa23.99■■□□□ 1.43
TMEM260-203ENST00000539559 AMOTQ4VCS5 1084 aa23.99■■□□□ 1.43
TMEM260-203ENST00000539559 CACTINQ8WUQ7 758 aaKnown RBP23.99■■□□□ 1.43
TMEM260-203ENST00000539559 FTOQ9C0B1 505 aaKnown RBP eCLIP23.99■■□□□ 1.43
TMEM260-203ENST00000539559 SCAND2PQ9GZW5 306 aaPredicted RBP23.99■■□□□ 1.43
TMEM260-203ENST00000539559 CLSTN2Q9H4D0 955 aa23.99■■□□□ 1.43
TMEM260-203ENST00000539559 GIGYF1O75420 1035 aaPredicted RBP23.98■■□□□ 1.43
TMEM260-203ENST00000539559 HOXB7P09629 217 aa23.98■■□□□ 1.43
TMEM260-203ENST00000539559 BRF1Q92994 677 aa23.98■■□□□ 1.43
TMEM260-203ENST00000539559 NCAPD2Q15021 1401 aa23.98■■□□□ 1.43
TMEM260-203ENST00000539559 ANKRD7Q92527 254 aa23.98■■□□□ 1.43
TMEM260-203ENST00000539559 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
TMEM260-203ENST00000539559 RGPD2P0DJD1 1756 aa23.98■■□□□ 1.43
TMEM260-203ENST00000539559 ALDH1L1O75891 902 aa23.97■■□□□ 1.43
TMEM260-203ENST00000539559 SEC62Q99442 399 aaKnown RBP23.97■■□□□ 1.43
TMEM260-203ENST00000539559 TNNT1P13805 278 aa23.97■■□□□ 1.43
TMEM260-203ENST00000539559 NCBP1Q09161 790 aaKnown RBP23.97■■□□□ 1.43
TMEM260-203ENST00000539559 RNF20Q5VTR2 975 aa23.97■■□□□ 1.43
TMEM260-203ENST00000539559 PLA2G4DQ86XP0 818 aa23.97■■□□□ 1.43
TMEM260-203ENST00000539559 ZNF592Q92610 1267 aa23.97■■□□□ 1.43
TMEM260-203ENST00000539559 AKAP4Q5JQC9 854 aa23.97■■□□□ 1.43
TMEM260-203ENST00000539559 CLIP2Q9UDT6 1046 aa23.97■■□□□ 1.43
TMEM260-203ENST00000539559 COL15A1P39059 1388 aa23.96■■□□□ 1.43
TMEM260-203ENST00000539559 CTIFO43310 598 aaKnown RBP23.96■■□□□ 1.43
TMEM260-203ENST00000539559 HSP90B1P14625 803 aaKnown RBP23.96■■□□□ 1.43
TMEM260-203ENST00000539559 FBXW7Q969H0 707 aa23.96■■□□□ 1.43
TMEM260-203ENST00000539559 DDX19AQ9NUU7 478 aaKnown RBP23.96■■□□□ 1.43
TMEM260-203ENST00000539559 STRCQ7RTU9 1775 aa23.96■■□□□ 1.43
TMEM260-203ENST00000539559 EPHA10Q5JZY3 1008 aa23.96■■□□□ 1.43
TMEM260-203ENST00000539559 ERCC4Q92889 916 aaPredicted RBP23.96■■□□□ 1.43
TMEM260-203ENST00000539559 RNMTO43148 476 aaKnown RBP23.95■■□□□ 1.42
TMEM260-203ENST00000539559 ERBB3P21860 1342 aa23.95■■□□□ 1.42
TMEM260-203ENST00000539559 TNS3Q68CZ2 1445 aa23.95■■□□□ 1.42
TMEM260-203ENST00000539559 TAF5LO75529 589 aa23.95■■□□□ 1.42
TMEM260-203ENST00000539559 C11orf57Q6ZUT1 292 aaPredicted RBP23.95■■□□□ 1.42
TMEM260-203ENST00000539559 MED23Q9ULK4 1368 aa23.94■■□□□ 1.42
TMEM260-203ENST00000539559 HIP1O00291 1037 aa23.94■■□□□ 1.42
TMEM260-203ENST00000539559 MYL6BP14649 208 aa23.94■■□□□ 1.42
TMEM260-203ENST00000539559 ANKRD1Q15327 319 aa23.94■■□□□ 1.42
TMEM260-203ENST00000539559 SLFNL1Q499Z3 407 aa23.94■■□□□ 1.42
TMEM260-203ENST00000539559 PXDNQ92626 1479 aa23.94■■□□□ 1.42
TMEM260-203ENST00000539559 PIP4K2AP48426 406 aaPredicted RBP23.94■■□□□ 1.42
TMEM260-203ENST00000539559 Q6ZUG5 572 aa23.94■■□□□ 1.42
TMEM260-203ENST00000539559 TDRD7Q8NHU6 1098 aaKnown RBP23.94■■□□□ 1.42
TMEM260-203ENST00000539559 H3BQV1 296 aa23.93■■□□□ 1.42
TMEM260-203ENST00000539559 IGKV5-2P06315 115 aa23.93■■□□□ 1.42
TMEM260-203ENST00000539559 RESTQ13127 1097 aa23.93■■□□□ 1.42
TMEM260-203ENST00000539559 TPD52L1Q16890 204 aaPredicted RBP23.93■■□□□ 1.42
TMEM260-203ENST00000539559 IFFO2Q5TF58 517 aa23.93■■□□□ 1.42
TMEM260-203ENST00000539559 KDM3BQ7LBC6 1761 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms