RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 BAG4O95429 457 aaKnown RBP11.73□□□□□ -0.53
GGA3-201ENST00000537686 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
GGA3-201ENST00000537686 TTF1Q15361 905 aaPredicted RBP11.73□□□□□ -0.53
GGA3-201ENST00000537686 CEP85Q6P2H3 762 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 TMX3Q96JJ7 454 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 AK7Q96M32 723 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 CEP131Q9UPN4 1083 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 ZNF76P36508 570 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 CCDC183Q5T5S1 534 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 KLHL10Q6JEL2 608 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 PLEKHF1Q96S99 279 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 ESYT1Q9BSJ8 1104 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 DEF6Q9H4E7 631 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 PHAXQ9H814 394 aaKnown RBP11.73□□□□□ -0.53
GGA3-201ENST00000537686 KIAA1210Q9ULL0 1709 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 IL2RBP14784 551 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 NECAB1Q8N987 351 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 LRRC2Q9BYS8 371 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 ACBD3Q9H3P7 528 aa11.73□□□□□ -0.53
GGA3-201ENST00000537686 SEC63Q9UGP8 760 aaKnown RBP11.73□□□□□ -0.53
GGA3-201ENST00000537686 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 CBFA2T2O43439 604 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
GGA3-201ENST00000537686 DDB1Q16531 1140 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 TMEM67Q5HYA8 995 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 NBPF6Q5VWK0 638 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 NBPF5PQ86XG9 351 aaPredicted RBP11.72□□□□□ -0.53
GGA3-201ENST00000537686 CCDC112Q8NEF3 446 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 NBPF4Q96M43 638 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
GGA3-201ENST00000537686 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 G2E3Q7L622 706 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 AATKQ6ZMQ8 1374 aa11.72□□□□□ -0.53
GGA3-201ENST00000537686 SMTNL1A8MU46 457 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 RFC4P35249 363 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 IL15P40933 162 aaPredicted RBP11.71□□□□□ -0.53
GGA3-201ENST00000537686 SYCP1Q15431 976 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 C8orf34Q49A92 452 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 NOM1Q5C9Z4 860 aaKnown RBP11.71□□□□□ -0.53
GGA3-201ENST00000537686 ZNF521Q96K83 1311 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 PPLO60437 1756 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 FSIP1Q8NA03 581 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 PDCL3Q9H2J4 239 aa11.71□□□□□ -0.53
GGA3-201ENST00000537686 TOM1O60784 492 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 ATP6V1AP38606 617 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 CCDC152Q4G0S7 254 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 CATIPQ7Z7H3 387 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 NCOA7Q8NI08 942 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 DCAF5Q96JK2 942 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 ANO10Q9NW15 660 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 TSPY2A6NKD2 308 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 LDHCP07864 332 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 UQCRFS1P1P0C7P4 283 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 CCDC96Q2M329 555 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 ZSCAN30Q86W11 494 aa11.71□□□□□ -0.54
GGA3-201ENST00000537686 MFSD6Q6ZSS7 791 aa11.7□□□□□ -0.54
GGA3-201ENST00000537686 DDX21Q9NR30 783 aaKnown RBP eCLIP11.7□□□□□ -0.54
GGA3-201ENST00000537686 USP25Q9UHP3 1055 aa11.7□□□□□ -0.54
GGA3-201ENST00000537686 CCDC194A0A1B0GVG4 234 aa11.7□□□□□ -0.54
GGA3-201ENST00000537686 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
GGA3-201ENST00000537686 RBM10P98175 930 aaKnown RBP11.7□□□□□ -0.54
GGA3-201ENST00000537686 SLC4A8Q2Y0W8 1093 aa11.7□□□□□ -0.54
GGA3-201ENST00000537686 LUC7LQ9NQ29 371 aaKnown RBP11.7□□□□□ -0.54
GGA3-201ENST00000537686 NIP7Q9Y221 180 aaKnown RBP eCLIP11.7□□□□□ -0.54
GGA3-201ENST00000537686 REREQ9P2R6 1566 aa11.7□□□□□ -0.54
GGA3-201ENST00000537686 ZFYP08048 801 aaPredicted RBP11.7□□□□□ -0.54
GGA3-201ENST00000537686 NLRP5P59047 1200 aa11.7□□□□□ -0.54
GGA3-201ENST00000537686 SSRP1Q08945 709 aaKnown RBP11.7□□□□□ -0.54
GGA3-201ENST00000537686 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 KLF18A0A0U1RQI7 1052 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 RNMTO43148 476 aaKnown RBP11.69□□□□□ -0.54
GGA3-201ENST00000537686 MCM5P33992 734 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 PANK2Q9BZ23 570 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 STX8Q9UNK0 236 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 ZNF335Q9H4Z2 1342 aaPredicted RBP11.69□□□□□ -0.54
GGA3-201ENST00000537686 SFPQP23246 707 aaKnown RBP eCLIP11.69□□□□□ -0.54
GGA3-201ENST00000537686 ANKRD18AQ8IVF6 992 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 HELBQ8NG08 1087 aaPredicted RBP11.69□□□□□ -0.54
GGA3-201ENST00000537686 NLRP3Q96P20 1036 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
GGA3-201ENST00000537686 BIN1O00499 593 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 ZBTB7BO15156 539 aaPredicted RBP11.69□□□□□ -0.54
GGA3-201ENST00000537686 METAP2P50579 478 aaKnown RBP eCLIP11.69□□□□□ -0.54
GGA3-201ENST00000537686 SLC9C2Q5TAH2 1124 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 C8orf37Q96NL8 207 aa11.69□□□□□ -0.54
GGA3-201ENST00000537686 BAG3O95817 575 aa11.68□□□□□ -0.54
GGA3-201ENST00000537686 CDR1P51861 262 aa11.68□□□□□ -0.54
GGA3-201ENST00000537686 SLF2Q8IX21 1173 aa11.68□□□□□ -0.54
GGA3-201ENST00000537686 MAP7D2Q96T17 732 aa11.68□□□□□ -0.54
GGA3-201ENST00000537686 DDX19AQ9NUU7 478 aaKnown RBP11.68□□□□□ -0.54
GGA3-201ENST00000537686 ANAPC15P60006 121 aa11.68□□□□□ -0.54
GGA3-201ENST00000537686 MTERF4Q7Z6M4 381 aaKnown RBP11.68□□□□□ -0.54
GGA3-201ENST00000537686 KDM2BQ8NHM5 1336 aa11.68□□□□□ -0.54
GGA3-201ENST00000537686 SIGLEC1Q9BZZ2 1709 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms