RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 KRT222Q8N1A0 295 aa17.06■□□□□ 0.32
CDH20-202ENST00000536675 BRF1Q92994 677 aa17.05■□□□□ 0.32
CDH20-202ENST00000536675 ADAMTS13Q76LX8 1427 aa17.05■□□□□ 0.32
CDH20-202ENST00000536675 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
CDH20-202ENST00000536675 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 KCNQ3O43525 872 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 CCZ1BP86790 482 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 CCZ1P86791 482 aaPredicted RBP17.04■□□□□ 0.32
CDH20-202ENST00000536675 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 EAF2Q96CJ1 260 aaPredicted RBP17.04■□□□□ 0.32
CDH20-202ENST00000536675 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
CDH20-202ENST00000536675 FAM53CQ9NYF3 392 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
CDH20-202ENST00000536675 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 NGDNQ8NEJ9 315 aaKnown RBP17.04■□□□□ 0.32
CDH20-202ENST00000536675 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 TRMT1Q9NXH9 659 aaKnown RBP17.04■□□□□ 0.32
CDH20-202ENST00000536675 MED23Q9ULK4 1368 aa17.04■□□□□ 0.32
CDH20-202ENST00000536675 SASH1O94885 1247 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 STX1AQ16623 288 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 FBXO38Q6PIJ6 1188 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 ZNF589Q86UQ0 364 aaPredicted RBP17.03■□□□□ 0.32
CDH20-202ENST00000536675 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 TLR7Q9NYK1 1049 aaKnown RBP17.03■□□□□ 0.32
CDH20-202ENST00000536675 CEMIPQ8WUJ3 1361 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.03■□□□□ 0.32
CDH20-202ENST00000536675 NLRP6P59044 892 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 CEBPZQ03701 1054 aaKnown RBP17.03■□□□□ 0.32
CDH20-202ENST00000536675 ELF2Q15723 593 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 FILIP1Q7Z7B0 1213 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 BOLA2Q9H3K6 86 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 ERBB3P21860 1342 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 A0A087WWV3 80 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 TSGA10IPQ3SY00 556 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 CCAR2Q8N163 923 aaKnown RBP17.03■□□□□ 0.32
CDH20-202ENST00000536675 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
CDH20-202ENST00000536675 H3BQV1 296 aa17.02■□□□□ 0.32
CDH20-202ENST00000536675 HOXB7P09629 217 aa17.02■□□□□ 0.32
CDH20-202ENST00000536675 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
CDH20-202ENST00000536675 DHX40Q8IX18 779 aaKnown RBP17.02■□□□□ 0.32
CDH20-202ENST00000536675 CFAP45Q9UL16 551 aa17.02■□□□□ 0.32
CDH20-202ENST00000536675 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.31
CDH20-202ENST00000536675 HMG20BQ9P0W2 317 aa17.02■□□□□ 0.31
CDH20-202ENST00000536675 MAP3K2Q9Y2U5 619 aa17.02■□□□□ 0.31
CDH20-202ENST00000536675 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
CDH20-202ENST00000536675 JCADQ9P266 1359 aa17.01■□□□□ 0.31
CDH20-202ENST00000536675 CCAR1Q8IX12 1150 aaKnown RBP17.01■□□□□ 0.31
CDH20-202ENST00000536675 GOLPH3LQ9H4A5 285 aa17.01■□□□□ 0.31
CDH20-202ENST00000536675 ZSCAN16Q9H4T2 348 aaPredicted RBP17.01■□□□□ 0.31
CDH20-202ENST00000536675 MARF1Q9Y4F3 1742 aaKnown RBP17.01■□□□□ 0.31
CDH20-202ENST00000536675 TMEM2Q9UHN6 1383 aa17.01■□□□□ 0.31
CDH20-202ENST00000536675 BECN2A8MW95 431 aa17.01■□□□□ 0.31
CDH20-202ENST00000536675 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
CDH20-202ENST00000536675 CTAGE5O15320 804 aa17■□□□□ 0.31
CDH20-202ENST00000536675 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
CDH20-202ENST00000536675 MED1Q15648 1581 aaPredicted RBP17■□□□□ 0.31
CDH20-202ENST00000536675 TAF5LO75529 589 aa17■□□□□ 0.31
CDH20-202ENST00000536675 ALDH1L1O75891 902 aa17■□□□□ 0.31
CDH20-202ENST00000536675 SLU7O95391 586 aaKnown RBP17■□□□□ 0.31
CDH20-202ENST00000536675 FTOQ9C0B1 505 aaKnown RBP eCLIP17■□□□□ 0.31
CDH20-202ENST00000536675 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDH20-202ENST00000536675 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
CDH20-202ENST00000536675 SLFNL1Q499Z3 407 aa16.99■□□□□ 0.31
CDH20-202ENST00000536675 ZNF446Q9NWS9 450 aa16.99■□□□□ 0.31
CDH20-202ENST00000536675 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
CDH20-202ENST00000536675 KAZALD1Q96I82 304 aa16.99■□□□□ 0.31
CDH20-202ENST00000536675 ST7Q9NRC1 585 aa16.99■□□□□ 0.31
CDH20-202ENST00000536675 KCND1Q9NSA2 647 aa16.99■□□□□ 0.31
CDH20-202ENST00000536675 SETD1BQ9UPS6 1966 aaKnown RBP16.99■□□□□ 0.31
CDH20-202ENST00000536675 Q6ZUG5 572 aa16.99■□□□□ 0.31
CDH20-202ENST00000536675 RCOR1Q9UKL0 485 aa16.99■□□□□ 0.31
CDH20-202ENST00000536675 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
CDH20-202ENST00000536675 USPL1Q5W0Q7 1092 aa16.98■□□□□ 0.31
CDH20-202ENST00000536675 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
CDH20-202ENST00000536675 COL15A1P39059 1388 aa16.98■□□□□ 0.31
CDH20-202ENST00000536675 NPHP1O15259 732 aa16.98■□□□□ 0.31
CDH20-202ENST00000536675 PROSER3Q2NL68 480 aa16.98■□□□□ 0.31
CDH20-202ENST00000536675 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
CDH20-202ENST00000536675 NEK1Q96PY6 1258 aa16.98■□□□□ 0.31
CDH20-202ENST00000536675 CHMP4AQ9BY43 222 aa16.98■□□□□ 0.31
CDH20-202ENST00000536675 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
CDH20-202ENST00000536675 KRT32Q14532 448 aa16.97■□□□□ 0.31
CDH20-202ENST00000536675 SIL1Q9H173 461 aa16.97■□□□□ 0.31
CDH20-202ENST00000536675 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
CDH20-202ENST00000536675 ANO10Q9NW15 660 aa16.97■□□□□ 0.31
CDH20-202ENST00000536675 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
CDH20-202ENST00000536675 FOSBP53539 338 aa16.97■□□□□ 0.31
CDH20-202ENST00000536675 SCRN1Q12765 414 aa16.97■□□□□ 0.31
CDH20-202ENST00000536675 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
CDH20-202ENST00000536675 NBPF11Q86T75 865 aa16.97■□□□□ 0.31
CDH20-202ENST00000536675 AOPEPQ8N6M6 819 aa16.97■□□□□ 0.31
CDH20-202ENST00000536675 CCDC73Q6ZRK6 1079 aa16.96■□□□□ 0.31
CDH20-202ENST00000536675 ENGASEQ8NFI3 743 aa16.96■□□□□ 0.31
CDH20-202ENST00000536675 ERCC4Q92889 916 aaPredicted RBP16.96■□□□□ 0.31
CDH20-202ENST00000536675 TMEM51Q9NW97 253 aa16.96■□□□□ 0.31
CDH20-202ENST00000536675 LAMA4Q16363 1823 aa16.96■□□□□ 0.31
CDH20-202ENST00000536675 BTBD11A6QL63 1104 aa16.96■□□□□ 0.31
CDH20-202ENST00000536675 ZBTB22O15209 634 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms