RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 CTAGE5O15320 804 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 LMOD1P29536 600 aaPredicted RBP18.74■□□□□ 0.59
KDM4B-203ENST00000536461 UVSSAQ2YD98 709 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 IQSEC3Q9UPP2 1182 aaPredicted RBP18.74■□□□□ 0.59
KDM4B-203ENST00000536461 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 LRSAM1Q6UWE0 723 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 CCDC191Q8NCU4 936 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 TRPC5Q9UL62 973 aaPredicted RBP18.74■□□□□ 0.59
KDM4B-203ENST00000536461 SPDYE4A6NLX3 237 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 KIAA0754O94854 1291 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 RBM17Q96I25 401 aaKnown RBP18.74■□□□□ 0.59
KDM4B-203ENST00000536461 ANKRD2Q9GZV1 360 aa18.74■□□□□ 0.59
KDM4B-203ENST00000536461 NPHP4O75161 1426 aaPredicted RBP18.73■□□□□ 0.59
KDM4B-203ENST00000536461 SYCP1Q15431 976 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 CATIPQ7Z7H3 387 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 DDX11Q96FC9 970 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 SFPQP23246 707 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■■■■□ 20.5
KDM4B-203ENST00000536461 ANKRD44Q8N8A2 993 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 DEF6Q9H4E7 631 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 PARP10Q53GL7 1025 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 ZNF790Q6PG37 636 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 EHMT1Q9H9B1 1298 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 QTRT2Q9H974 415 aaKnown RBP18.73■□□□□ 0.59
KDM4B-203ENST00000536461 ZKSCAN5Q9Y2L8 839 aa18.73■□□□□ 0.59
KDM4B-203ENST00000536461 PAF1Q8N7H5 531 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 RRAGDQ9NQL2 400 aaPredicted RBP18.72■□□□□ 0.59
KDM4B-203ENST00000536461 CLIP2Q9UDT6 1046 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 USP8P40818 1118 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 RBM26Q5T8P6 1007 aaKnown RBP18.72■□□□□ 0.59
KDM4B-203ENST00000536461 C8orf76Q96K31 380 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 GDPD2Q9HCC8 539 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 ANO10Q9NW15 660 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 SCLT1Q96NL6 688 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 CYP7A1P22680 504 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 PZPP20742 1482 aa18.72■□□□□ 0.59
KDM4B-203ENST00000536461 COL17A1Q9UMD9 1497 aaPredicted RBP18.72■□□□□ 0.59
KDM4B-203ENST00000536461 IBSPP21815 317 aaPredicted RBP18.71■□□□□ 0.59
KDM4B-203ENST00000536461 ZNF772Q68DY9 489 aaPredicted RBP18.71■□□□□ 0.59
KDM4B-203ENST00000536461 RHPN1Q8TCX5 695 aa18.71■□□□□ 0.59
KDM4B-203ENST00000536461 CCDC102AQ96A19 550 aa18.71■□□□□ 0.59
KDM4B-203ENST00000536461 MRPL50Q8N5N7 158 aaKnown RBP18.71■□□□□ 0.59
KDM4B-203ENST00000536461 DDX21Q9NR30 783 aaKnown RBP eCLIP18.71■□□□□ 0.59
KDM4B-203ENST00000536461 PHACTR3Q96KR7 559 aa18.71■□□□□ 0.59
KDM4B-203ENST00000536461 VEZTQ9HBM0 779 aa18.71■□□□□ 0.58
KDM4B-203ENST00000536461 NAA16Q6N069 864 aaPredicted RBP18.7■□□□□ 0.58
KDM4B-203ENST00000536461 CCDC82Q8N4S0 544 aa18.7■□□□□ 0.58
KDM4B-203ENST00000536461 ZFYP08048 801 aaPredicted RBP18.7■□□□□ 0.58
KDM4B-203ENST00000536461 KIF5BP33176 963 aa18.7■□□□□ 0.58
KDM4B-203ENST00000536461 ANAPC15P60006 121 aa18.7■□□□□ 0.58
KDM4B-203ENST00000536461 PCDHB15Q9Y5E8 787 aa18.7■□□□□ 0.58
KDM4B-203ENST00000536461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.7■□□□□ 0.582e-6■■■■□ 20.8
KDM4B-203ENST00000536461 MFSD6Q6ZSS7 791 aa18.7■□□□□ 0.58
KDM4B-203ENST00000536461 RIMBP2O15034 1052 aa18.69■□□□□ 0.58
KDM4B-203ENST00000536461 SNX21Q969T3 373 aa18.69■□□□□ 0.58
KDM4B-203ENST00000536461 MEIS3Q99687 375 aa18.69■□□□□ 0.58
KDM4B-203ENST00000536461 DDX19AQ9NUU7 478 aaKnown RBP18.69■□□□□ 0.58
KDM4B-203ENST00000536461 MATR3P43243 847 aaKnown RBP eCLIP18.69■□□□□ 0.58
KDM4B-203ENST00000536461 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
KDM4B-203ENST00000536461 NEMFO60524 1076 aa18.69■□□□□ 0.58
KDM4B-203ENST00000536461 PPP4R3AQ6IN85 833 aa18.69■□□□□ 0.58
KDM4B-203ENST00000536461 KAT14Q9H8E8 782 aa18.69■□□□□ 0.58
KDM4B-203ENST00000536461 HS1BP3Q53T59 392 aa18.68■□□□□ 0.58
KDM4B-203ENST00000536461 SH3TC1Q8TE82 1336 aa18.68■□□□□ 0.58
KDM4B-203ENST00000536461 NOLC1Q14978 699 aaKnown RBP eCLIP18.68■□□□□ 0.581e-10■■■■□ 24.6
KDM4B-203ENST00000536461 MPHOSPH6Q99547 160 aaKnown RBP18.68■□□□□ 0.58
KDM4B-203ENST00000536461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■■■■■ 107.8
KDM4B-203ENST00000536461 INSRP06213 1382 aa18.68■□□□□ 0.58
KDM4B-203ENST00000536461 H0YIN7 160 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 CFAP100Q494V2 611 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 GOLGA8AA7E2F4 631 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 GOLGA8BA8MQT2 603 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 ATP8B2P98198 1209 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 TRERF1Q96PN7 1200 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 URI1O94763 535 aaPredicted RBP18.67■□□□□ 0.58
KDM4B-203ENST00000536461 RXRBP28702 533 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 SLC4A8Q2Y0W8 1093 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 CKAP2LQ8IYA6 745 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 STX8Q9UNK0 236 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 CAVIN2O95810 425 aa18.67■□□□□ 0.58
KDM4B-203ENST00000536461 CCDC12Q8WUD4 166 aaPredicted RBP18.67■□□□□ 0.58
KDM4B-203ENST00000536461 PLEKHG1Q9ULL1 1385 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 PLCG2P16885 1265 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 RAB34Q9BZG1 259 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 SLC52A2Q9HAB3 445 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 PER1O15534 1290 aaPredicted RBP18.66■□□□□ 0.58
KDM4B-203ENST00000536461 ZSCAN12O43309 604 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 HCLS1P14317 486 aaPredicted RBP18.66■□□□□ 0.58
KDM4B-203ENST00000536461 FLAD1Q8NFF5 587 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 GBP3Q9H0R5 595 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 BABAM1Q9NWV8 329 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 CCDC194A0A1B0GVG4 234 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 CWF19L2Q2TBE0 894 aaKnown RBP18.66■□□□□ 0.58
KDM4B-203ENST00000536461 HELBQ8NG08 1087 aaPredicted RBP18.66■□□□□ 0.58
KDM4B-203ENST00000536461 TRMT1Q9NXH9 659 aaKnown RBP18.66■□□□□ 0.58
KDM4B-203ENST00000536461 POLR3GO15318 223 aaPredicted RBP18.66■□□□□ 0.58
KDM4B-203ENST00000536461 PICALMQ13492 652 aa18.66■□□□□ 0.58
KDM4B-203ENST00000536461 IQCEQ6IPM2 695 aa18.65■□□□□ 0.58
KDM4B-203ENST00000536461 TMEM67Q5HYA8 995 aa18.65■□□□□ 0.58
KDM4B-203ENST00000536461 TANGO6Q9C0B7 1094 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms