RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
YBX3-205ENST00000536107 FANCAO15360 1455 aa7.08□□□□□ -1.28
YBX3-205ENST00000536107 KCNQ4P56696 695 aa7.07□□□□□ -1.28
YBX3-205ENST00000536107 MAP7D1Q3KQU3 841 aa7.07□□□□□ -1.28
YBX3-205ENST00000536107 RAB44Q7Z6P3 723 aaPredicted RBP7.07□□□□□ -1.28
YBX3-205ENST00000536107 ZDHHC1Q8WTX9 485 aa7.07□□□□□ -1.28
YBX3-205ENST00000536107 WFDC12Q8WWY7 111 aa7.07□□□□□ -1.28
YBX3-205ENST00000536107 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
YBX3-205ENST00000536107 JPH1Q9HDC5 661 aaPredicted RBP7.07□□□□□ -1.28
YBX3-205ENST00000536107 AKNAQ7Z591 1439 aa7.07□□□□□ -1.28
YBX3-205ENST00000536107 TEAD4Q15561 434 aa7.06□□□□□ -1.28
YBX3-205ENST00000536107 PRR23CQ6ZRP0 262 aa7.06□□□□□ -1.28
YBX3-205ENST00000536107 L3MBTL2Q969R5 705 aa7.06□□□□□ -1.28
YBX3-205ENST00000536107 RGS17Q9UGC6 210 aaPredicted RBP7.06□□□□□ -1.28
YBX3-205ENST00000536107 STRCQ7RTU9 1775 aa7.05□□□□□ -1.28
YBX3-205ENST00000536107 TAL1P17542 331 aaPredicted RBP7.05□□□□□ -1.28
YBX3-205ENST00000536107 CD97P48960 835 aa7.05□□□□□ -1.28
YBX3-205ENST00000536107 AFF1P51825 1210 aaKnown RBP7.05□□□□□ -1.28
YBX3-205ENST00000536107 SCHIP1Q9P0W5 487 aaPredicted RBP7.05□□□□□ -1.28
YBX3-205ENST00000536107 BACH1O14867 736 aa7.04□□□□□ -1.28
YBX3-205ENST00000536107 NOS3P29474 1203 aa7.04□□□□□ -1.28
YBX3-205ENST00000536107 SSTR4P31391 388 aa7.04□□□□□ -1.28
YBX3-205ENST00000536107 NOS2P35228 1153 aa7.04□□□□□ -1.28
YBX3-205ENST00000536107 DMRTC2Q8IXT2 367 aaPredicted RBP7.04□□□□□ -1.28
YBX3-205ENST00000536107 DTWD1Q8N5C7 304 aa7.04□□□□□ -1.28
YBX3-205ENST00000536107 BRD7Q9NPI1 651 aa7.04□□□□□ -1.28
YBX3-205ENST00000536107 SLC6A14Q9UN76 642 aa7.04□□□□□ -1.28
YBX3-205ENST00000536107 RNF114Q9Y508 228 aa7.04□□□□□ -1.28
YBX3-205ENST00000536107 PREX1Q8TCU6 1659 aa7.03□□□□□ -1.28
YBX3-205ENST00000536107 IREB2P48200 963 aaKnown RBP7.03□□□□□ -1.28
YBX3-205ENST00000536107 POTEAQ6S8J7 498 aa7.03□□□□□ -1.28
YBX3-205ENST00000536107 FAM9AQ8IZU1 332 aaPredicted RBP7.03□□□□□ -1.28
YBX3-205ENST00000536107 NUDT8Q8WV74 236 aa7.03□□□□□ -1.28
YBX3-205ENST00000536107 KCNH4Q9UQ05 1017 aa7.03□□□□□ -1.28
YBX3-205ENST00000536107 FBXO11Q86XK2 927 aa7.02□□□□□ -1.29
YBX3-205ENST00000536107 PLPP7Q8NBV4 271 aa7.02□□□□□ -1.29
YBX3-205ENST00000536107 MEGF10Q96KG7 1140 aa7.02□□□□□ -1.29
YBX3-205ENST00000536107 UBE2OQ9C0C9 1292 aaKnown RBP7.02□□□□□ -1.29
YBX3-205ENST00000536107 NEO1Q92859 1461 aa7.02□□□□□ -1.29
YBX3-205ENST00000536107 DENND4BO75064 1496 aaPredicted RBP7.01□□□□□ -1.29
YBX3-205ENST00000536107 FSTP19883 344 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 PSAPL1Q6NUJ1 521 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 BHMTQ93088 406 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 CEP63Q96MT8 703 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 EFCC1Q9HA90 598 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 PCDHGA11Q9Y5H2 935 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 OAS3Q9Y6K5 1087 aaKnown RBP7.01□□□□□ -1.29
YBX3-205ENST00000536107 ARHGEF40Q8TER5 1519 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 DISP1Q96F81 1524 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 NCOA1Q15788 1441 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 SRCAPQ6ZRS2 3230 aa7.01□□□□□ -1.29
YBX3-205ENST00000536107 TTC37Q6PGP7 1564 aa7□□□□□ -1.29
YBX3-205ENST00000536107 IGF2-ASQ6U949 168 aa7□□□□□ -1.29
YBX3-205ENST00000536107 RHPN1Q8TCX5 695 aa7□□□□□ -1.29
YBX3-205ENST00000536107 ANKIB1Q9P2G1 1089 aa7□□□□□ -1.29
YBX3-205ENST00000536107 KIAA1324LA8MWY0 1029 aaPredicted RBP6.99□□□□□ -1.29
YBX3-205ENST00000536107 RGS9O75916 674 aaPredicted RBP6.99□□□□□ -1.29
YBX3-205ENST00000536107 GP2P55259 537 aaKnown RBP6.99□□□□□ -1.29
YBX3-205ENST00000536107 TBC1D8BQ0IIM8 1120 aa6.99□□□□□ -1.29
YBX3-205ENST00000536107 MSL1Q68DK7 614 aa6.99□□□□□ -1.29
YBX3-205ENST00000536107 SNRKQ9NRH2 765 aa6.99□□□□□ -1.29
YBX3-205ENST00000536107 ZNF232Q9UNY5 417 aa6.99□□□□□ -1.29
YBX3-205ENST00000536107 IQGAP2Q13576 1575 aa6.99□□□□□ -1.29
YBX3-205ENST00000536107 CARMIL1Q5VZK9 1371 aa6.98□□□□□ -1.29
YBX3-205ENST00000536107 EPHA4P54764 986 aa6.98□□□□□ -1.29
YBX3-205ENST00000536107 TYRO3Q06418 890 aa6.98□□□□□ -1.29
YBX3-205ENST00000536107 C1orf53Q5VUE5 145 aa6.98□□□□□ -1.29
YBX3-205ENST00000536107 DZIP1LQ8IYY4 767 aaKnown RBP6.98□□□□□ -1.29
YBX3-205ENST00000536107 NAGPAQ9UK23 515 aa6.98□□□□□ -1.29
YBX3-205ENST00000536107 FER1L4A9Z1Z3 1794 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 ZFYVE16Q7Z3T8 1539 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 SERTM1A2A2V5 107 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 SFI1A8K8P3 1242 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 FRMPD1Q5SYB0 1578 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 SLC9A9Q8IVB4 645 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 KRTAP4-2Q9BYR5 136 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 IGFLR1Q9H665 355 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 ZNF358Q9NW07 568 aa6.97□□□□□ -1.29
YBX3-205ENST00000536107 DNAJB12Q9NXW2 375 aaKnown RBP6.97□□□□□ -1.29
YBX3-205ENST00000536107 PTPRKQ15262 1439 aa6.96□□□□□ -1.3
YBX3-205ENST00000536107 KIF27Q86VH2 1401 aa6.96□□□□□ -1.3
YBX3-205ENST00000536107 TRAPPC8Q9Y2L5 1435 aa6.96□□□□□ -1.3
YBX3-205ENST00000536107 IRF5Q13568 498 aa6.96□□□□□ -1.3
YBX3-205ENST00000536107 HSH2DQ96JZ2 352 aa6.96□□□□□ -1.3
YBX3-205ENST00000536107 TBC1D2BQ9UPU7 963 aa6.96□□□□□ -1.3
YBX3-205ENST00000536107 FHOD3Q2V2M9 1422 aa6.95□□□□□ -1.3
YBX3-205ENST00000536107 KIAA0556O60303 1618 aa6.95□□□□□ -1.3
YBX3-205ENST00000536107 MED26O95402 600 aa6.95□□□□□ -1.3
YBX3-205ENST00000536107 SH3PXD2AQ5TCZ1 1133 aa6.95□□□□□ -1.3
YBX3-205ENST00000536107 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.95□□□□□ -1.3
YBX3-205ENST00000536107 EFCAB5A4FU69 1503 aa6.95□□□□□ -1.3
YBX3-205ENST00000536107 ARHGEF12Q9NZN5 1544 aa6.95□□□□□ -1.3
YBX3-205ENST00000536107 GSC2O15499 205 aa6.94□□□□□ -1.3
YBX3-205ENST00000536107 HIRAP54198 1017 aaPredicted RBP6.94□□□□□ -1.3
YBX3-205ENST00000536107 CAMSAP1Q5T5Y3 1602 aa6.94□□□□□ -1.3
YBX3-205ENST00000536107 BIVM-ERCC5R4GMW8 1640 aa6.94□□□□□ -1.3
YBX3-205ENST00000536107 GRIK5Q16478 980 aa6.93□□□□□ -1.3
YBX3-205ENST00000536107 TBCELQ5QJ74 424 aa6.93□□□□□ -1.3
YBX3-205ENST00000536107 ZNF280CQ8ND82 737 aa6.93□□□□□ -1.3
YBX3-205ENST00000536107 SUSD3Q96L08 255 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms