RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 PARP4Q9UKK3 1724 aaKnown RBP15.71■□□□□ 0.11
LDLR-203ENST00000535915 VPS37CA5D8V6 355 aaPredicted RBP15.71■□□□□ 0.11
LDLR-203ENST00000535915 UBE2HP62256 183 aa15.71■□□□□ 0.11
LDLR-203ENST00000535915 COL9A3Q14050 684 aaPredicted RBP15.7■□□□□ 0.1
LDLR-203ENST00000535915 TCEANC2Q96MN5 208 aa15.7■□□□□ 0.1
LDLR-203ENST00000535915 GLI3P10071 1580 aa15.7■□□□□ 0.1
LDLR-203ENST00000535915 CCDC183Q5T5S1 534 aa15.7■□□□□ 0.1
LDLR-203ENST00000535915 CHMP3Q9Y3E7 222 aa15.7■□□□□ 0.1
LDLR-203ENST00000535915 NDUFB9Q9Y6M9 179 aa15.7■□□□□ 0.1
LDLR-203ENST00000535915 COL15A1P39059 1388 aa15.7■□□□□ 0.1
LDLR-203ENST00000535915 ANKRD1Q15327 319 aa15.7■□□□□ 0.1
LDLR-203ENST00000535915 DNAJC2Q99543 621 aaKnown RBP15.7■□□□□ 0.1
LDLR-203ENST00000535915 TAF6LQ9Y6J9 622 aa15.7■□□□□ 0.1
LDLR-203ENST00000535915 CPDO75976 1380 aa15.69■□□□□ 0.1
LDLR-203ENST00000535915 RPS6KB1P23443 525 aa15.69■□□□□ 0.1
LDLR-203ENST00000535915 DNM1Q05193 864 aaKnown RBP15.69■□□□□ 0.1
LDLR-203ENST00000535915 HMG20BQ9P0W2 317 aa15.69■□□□□ 0.1
LDLR-203ENST00000535915 TAF5LO75529 589 aa15.69■□□□□ 0.1
LDLR-203ENST00000535915 CSPP1Q1MSJ5 1256 aa15.69■□□□□ 0.1
LDLR-203ENST00000535915 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
LDLR-203ENST00000535915 DBNDD2Q9BQY9 259 aa15.69■□□□□ 0.1
LDLR-203ENST00000535915 JCADQ9P266 1359 aa15.68■□□□□ 0.1
LDLR-203ENST00000535915 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
LDLR-203ENST00000535915 CASP7P55210 303 aa15.68■□□□□ 0.1
LDLR-203ENST00000535915 NOL7Q9UMY1 257 aaKnown RBP15.68■□□□□ 0.1
LDLR-203ENST00000535915 NBPF26B4DH59 902 aa15.67■□□□□ 0.1
LDLR-203ENST00000535915 NBPF14Q5TI25 921 aa15.67■□□□□ 0.1
LDLR-203ENST00000535915 NBPF10Q6P3W6 841 aaKnown RBP15.67■□□□□ 0.1
LDLR-203ENST00000535915 NBPF15Q8N660 670 aa15.67■□□□□ 0.1
LDLR-203ENST00000535915 PODXL2Q9NZ53 605 aa15.67■□□□□ 0.1
LDLR-203ENST00000535915 CCDC9Q9Y3X0 531 aaKnown RBP15.67■□□□□ 0.1
LDLR-203ENST00000535915 NUP188Q5SRE5 1749 aa15.67■□□□□ 0.1
LDLR-203ENST00000535915 TOM1L2Q6ZVM7 507 aa15.67■□□□□ 0.1
LDLR-203ENST00000535915 PCDH11XQ9BZA7 1347 aa15.66■□□□□ 0.1
LDLR-203ENST00000535915 PCDH11YQ9BZA8 1340 aa15.66■□□□□ 0.1
LDLR-203ENST00000535915 UBR2Q8IWV8 1755 aa15.66■□□□□ 0.1
LDLR-203ENST00000535915 LETM1O95202 739 aaPredicted RBP15.66■□□□□ 0.1
LDLR-203ENST00000535915 ZCRB1Q8TBF4 217 aaKnown RBP15.66■□□□□ 0.1
LDLR-203ENST00000535915 TOB2Q14106 344 aaPredicted RBP15.66■□□□□ 0.1
LDLR-203ENST00000535915 TSGA10IPQ3SY00 556 aa15.66■□□□□ 0.1
LDLR-203ENST00000535915 TTLL7Q6ZT98 887 aa15.66■□□□□ 0.1
LDLR-203ENST00000535915 DDX46Q7L014 1031 aaKnown RBP15.66■□□□□ 0.1
LDLR-203ENST00000535915 HAUS7Q99871 368 aa15.66■□□□□ 0.1
LDLR-203ENST00000535915 ALDH8A1Q9H2A2 487 aaPredicted RBP15.66■□□□□ 0.1
LDLR-203ENST00000535915 PRDM11Q9NQV5 511 aa15.66■□□□□ 0.1
LDLR-203ENST00000535915 CCDC39Q9UFE4 941 aa15.66■□□□□ 0.1
LDLR-203ENST00000535915 ZNF609O15014 1411 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 CHGBP05060 677 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 PDCP20941 246 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 FOXO4P98177 505 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 STK3Q13188 491 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 KRT32Q14532 448 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 USPL1Q5W0Q7 1092 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 CCDC129Q6ZRS4 1044 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 FAM184AQ8NB25 1140 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 SEC62Q99442 399 aaKnown RBP15.65■□□□□ 0.1
LDLR-203ENST00000535915 H7C1W4 665 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 NEUROD6Q96NK8 337 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 CWC25Q9NXE8 425 aaPredicted RBP15.65■□□□□ 0.1
LDLR-203ENST00000535915 RFX7Q2KHR2 1363 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 XIRP1Q702N8 1843 aaKnown RBP15.65■□□□□ 0.1
LDLR-203ENST00000535915 WDR17Q8IZU2 1322 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 TJP1Q07157 1748 aa15.65■□□□□ 0.1
LDLR-203ENST00000535915 PDIA4P13667 645 aaKnown RBP15.64■□□□□ 0.09
LDLR-203ENST00000535915 MCMDC2Q4G0Z9 681 aa15.64■□□□□ 0.09
LDLR-203ENST00000535915 CDC37L1Q7L3B6 337 aa15.64■□□□□ 0.09
LDLR-203ENST00000535915 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
LDLR-203ENST00000535915 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.64■□□□□ 0.09
LDLR-203ENST00000535915 LAMA4Q16363 1823 aa15.64■□□□□ 0.09
LDLR-203ENST00000535915 A1BGP04217 495 aa15.64■□□□□ 0.09
LDLR-203ENST00000535915 ZKSCAN5Q9Y2L8 839 aa15.64■□□□□ 0.09
LDLR-203ENST00000535915 NEK1Q96PY6 1258 aa15.64■□□□□ 0.09
LDLR-203ENST00000535915 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
LDLR-203ENST00000535915 ERVV-2B6SEH9 535 aa15.63■□□□□ 0.09
LDLR-203ENST00000535915 ZBTB3Q9H5J0 574 aa15.63■□□□□ 0.09
LDLR-203ENST00000535915 PTMAP06454 111 aaKnown RBP15.63■□□□□ 0.09
LDLR-203ENST00000535915 KRT85P78386 507 aa15.63■□□□□ 0.09
LDLR-203ENST00000535915 KBTBD3Q8NAB2 608 aa15.63■□□□□ 0.09
LDLR-203ENST00000535915 HCLS1P14317 486 aaPredicted RBP15.62■□□□□ 0.09
LDLR-203ENST00000535915 UVSSAQ2YD98 709 aa15.62■□□□□ 0.09
LDLR-203ENST00000535915 BRINP3Q76B58 766 aa15.62■□□□□ 0.09
LDLR-203ENST00000535915 ATG9AQ7Z3C6 839 aa15.62■□□□□ 0.09
LDLR-203ENST00000535915 KCPQ6ZWJ8 1503 aa15.62■□□□□ 0.09
LDLR-203ENST00000535915 GOLIM4O00461 696 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 ZNF500O60304 480 aaPredicted RBP15.61■□□□□ 0.09
LDLR-203ENST00000535915 OFD1O75665 1012 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 CYP21A2P08686 494 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 TIMM10P62072 90 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 FAM173BQ6P4H8 233 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 GIMAP6Q6P9H5 292 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 PAPPAQ13219 1627 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 HSP90B1P14625 803 aaKnown RBP15.61■□□□□ 0.09
LDLR-203ENST00000535915 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.61■□□□□ 0.09
LDLR-203ENST00000535915 Q6ZUG5 572 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 PAG1Q9NWQ8 432 aa15.61■□□□□ 0.09
LDLR-203ENST00000535915 MCM5P33992 734 aa15.6■□□□□ 0.09
LDLR-203ENST00000535915 IL15P40933 162 aaPredicted RBP15.6■□□□□ 0.09
LDLR-203ENST00000535915 HSPA2P54652 639 aa15.6■□□□□ 0.09
LDLR-203ENST00000535915 TTC6Q86TZ1 520 aa15.6■□□□□ 0.09
LDLR-203ENST00000535915 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms