RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 BBOX1O75936 387 aa10.57□□□□□ -0.72
CHFR-211ENST00000535897 ANXA1P04083 346 aa10.57□□□□□ -0.72
CHFR-211ENST00000535897 HCLS1P14317 486 aaPredicted RBP10.57□□□□□ -0.72
CHFR-211ENST00000535897 AIMP1Q12904 312 aaKnown RBP10.57□□□□□ -0.72
CHFR-211ENST00000535897 DDX46Q7L014 1031 aaKnown RBP10.57□□□□□ -0.72
CHFR-211ENST00000535897 NECTIN2Q92692 538 aa10.57□□□□□ -0.72
CHFR-211ENST00000535897 H7C1D1 291 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 SLC34A2O95436 690 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 BRPF1P55201 1214 aaPredicted RBP10.56□□□□□ -0.72
CHFR-211ENST00000535897 KIAA2012Q0VF49 1180 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 HSP90AB3PQ58FF7 597 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 SLC10A5Q5PT55 438 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 CDC37L1Q7L3B6 337 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 SP8Q8IXZ3 490 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 ZC3H15Q8WU90 426 aaKnown RBP10.56□□□□□ -0.72
CHFR-211ENST00000535897 ZNF428Q96B54 188 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 RTFDC1Q9BY42 306 aaPredicted RBP10.56□□□□□ -0.72
CHFR-211ENST00000535897 MCOLN1Q9GZU1 580 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 TRMT112Q9UI30 125 aaKnown RBP10.56□□□□□ -0.72
CHFR-211ENST00000535897 CASP8AP2Q9UKL3 1982 aa10.56□□□□□ -0.72
CHFR-211ENST00000535897 HUNKP57058 714 aa10.55□□□□□ -0.72
CHFR-211ENST00000535897 DGKZQ13574 1117 aa10.55□□□□□ -0.72
CHFR-211ENST00000535897 PROSER3Q2NL68 480 aa10.55□□□□□ -0.72
CHFR-211ENST00000535897 TRPM4Q8TD43 1214 aa10.55□□□□□ -0.72
CHFR-211ENST00000535897 HHIPL1Q96JK4 782 aa10.55□□□□□ -0.72
CHFR-211ENST00000535897 PLEKHF1Q96S99 279 aa10.55□□□□□ -0.72
CHFR-211ENST00000535897 CNOT7Q9UIV1 285 aaKnown RBP10.55□□□□□ -0.72
CHFR-211ENST00000535897 SH3TC1Q8TE82 1336 aa10.55□□□□□ -0.72
CHFR-211ENST00000535897 TAF1P21675 1872 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 HIRAP54198 1017 aaPredicted RBP10.54□□□□□ -0.72
CHFR-211ENST00000535897 RIPK4P57078 832 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 NOGQ13253 232 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 GRAPQ13588 217 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 PDIA6Q15084 440 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 COPS6Q7L5N1 327 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 USP48Q86UV5 1035 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 NLRP10Q86W26 655 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 GRAPLQ8TC17 118 aaPredicted RBP10.54□□□□□ -0.72
CHFR-211ENST00000535897 XAGE3Q8WTP9 111 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 PGAP2Q9UHJ9 254 aa10.54□□□□□ -0.72
CHFR-211ENST00000535897 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
CHFR-211ENST00000535897 SHTN1A0MZ66 631 aa10.53□□□□□ -0.72
CHFR-211ENST00000535897 WASHC4Q2M389 1173 aa10.53□□□□□ -0.72
CHFR-211ENST00000535897 TBC1D10BQ4KMP7 808 aaPredicted RBP10.53□□□□□ -0.72
CHFR-211ENST00000535897 LRP10Q7Z4F1 713 aa10.53□□□□□ -0.72
CHFR-211ENST00000535897 NSFL1CQ9UNZ2 370 aaKnown RBP10.53□□□□□ -0.72
CHFR-211ENST00000535897 DUOX1Q9NRD9 1551 aa10.52□□□□□ -0.72
CHFR-211ENST00000535897 YDJCA8MPS7 323 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 C6orf229H3BNL8 230 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 RIMBP2O15034 1052 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 RGS19P49795 217 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 LMOD3Q0VAK6 560 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 TCIRG1Q13488 830 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.73
CHFR-211ENST00000535897 DLK2Q6UY11 383 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 SAMD7Q7Z3H4 446 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 KRT26Q7Z3Y9 468 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 TMC4Q7Z404 712 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 DBNDD1Q9H9R9 158 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 LRRC37AA6NMS7 1700 aa10.52□□□□□ -0.73
CHFR-211ENST00000535897 PSMD14O00487 310 aa10.51□□□□□ -0.73
CHFR-211ENST00000535897 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
CHFR-211ENST00000535897 RGMBQ6NW40 437 aa10.51□□□□□ -0.73
CHFR-211ENST00000535897 C2orf69Q8N8R5 385 aa10.51□□□□□ -0.73
CHFR-211ENST00000535897 DCPSQ96C86 337 aaKnown RBP10.51□□□□□ -0.73
CHFR-211ENST00000535897 ZIC5Q96T25 663 aa10.51□□□□□ -0.73
CHFR-211ENST00000535897 LAS1LQ9Y4W2 734 aaKnown RBP10.51□□□□□ -0.73
CHFR-211ENST00000535897 TNRC18O15417 2968 aaPredicted RBP10.51□□□□□ -0.73
CHFR-211ENST00000535897 DDX60Q8IY21 1712 aaKnown RBP10.5□□□□□ -0.73
CHFR-211ENST00000535897 ADM5C9JUS6 153 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 G3V3G9 751 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 ZNF157P51786 506 aaPredicted RBP10.5□□□□□ -0.73
CHFR-211ENST00000535897 NEUROD2Q15784 382 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 DOK7Q18PE1 504 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 DCAF8Q5TAQ9 597 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 DPF2Q92785 391 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 FAM89AQ96GI7 184 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 GBA2Q9HCG7 927 aaPredicted RBP10.5□□□□□ -0.73
CHFR-211ENST00000535897 BABAM1Q9NWV8 329 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 CHPF2Q9P2E5 772 aa10.5□□□□□ -0.73
CHFR-211ENST00000535897 PDE4DIPQ5VU43 2346 aa10.49□□□□□ -0.73
CHFR-211ENST00000535897 ECE2O60344 883 aa10.49□□□□□ -0.73
CHFR-211ENST00000535897 EGFRP00533 1210 aa10.49□□□□□ -0.73
CHFR-211ENST00000535897 RPS12P25398 132 aaKnown RBP10.49□□□□□ -0.73
CHFR-211ENST00000535897 KIF23Q02241 960 aaPredicted RBP10.49□□□□□ -0.73
CHFR-211ENST00000535897 KRT24Q2M2I5 525 aa10.49□□□□□ -0.73
CHFR-211ENST00000535897 HDGFL1Q5TGJ6 251 aa10.49□□□□□ -0.73
CHFR-211ENST00000535897 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
CHFR-211ENST00000535897 CELF1Q92879 486 aaKnown RBP10.49□□□□□ -0.73
CHFR-211ENST00000535897 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
CHFR-211ENST00000535897 EYA3Q99504 573 aa10.49□□□□□ -0.73
CHFR-211ENST00000535897 POLR2AP24928 1970 aaKnown RBP10.48□□□□□ -0.73
CHFR-211ENST00000535897 ATP5J2-PTCD1G3V325 749 aa10.48□□□□□ -0.73
CHFR-211ENST00000535897 TRPA1O75762 1119 aa10.48□□□□□ -0.73
CHFR-211ENST00000535897 TMPOP42166 694 aaKnown RBP10.48□□□□□ -0.73
CHFR-211ENST00000535897 GPSM2P81274 684 aa10.48□□□□□ -0.73
CHFR-211ENST00000535897 KIF4BQ2VIQ3 1234 aa10.48□□□□□ -0.73
CHFR-211ENST00000535897 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
CHFR-211ENST00000535897 PLBD2Q8NHP8 589 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms