RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 HECW1Q76N89 1606 aa8.54□□□□□ -1.04
TNFRSF1A-206ENST00000535038 KCNQ4P56696 695 aa8.54□□□□□ -1.04
TNFRSF1A-206ENST00000535038 DOC2BQ14184 412 aa8.54□□□□□ -1.04
TNFRSF1A-206ENST00000535038 ZNF280CQ8ND82 737 aa8.54□□□□□ -1.04
TNFRSF1A-206ENST00000535038 KCNH4Q9UQ05 1017 aa8.54□□□□□ -1.04
TNFRSF1A-206ENST00000535038 GCC2Q8IWJ2 1684 aa8.53□□□□□ -1.04
TNFRSF1A-206ENST00000535038 IFT140Q96RY7 1462 aa8.53□□□□□ -1.04
TNFRSF1A-206ENST00000535038 DKK1O94907 266 aa8.53□□□□□ -1.04
TNFRSF1A-206ENST00000535038 ALBP02768 609 aa8.53□□□□□ -1.04
TNFRSF1A-206ENST00000535038 ALDH16A1Q8IZ83 802 aa8.53□□□□□ -1.04
TNFRSF1A-206ENST00000535038 PRDM6Q9NQX0 595 aa8.53□□□□□ -1.04
TNFRSF1A-206ENST00000535038 STARD13Q9Y3M8 1113 aa8.53□□□□□ -1.04
TNFRSF1A-206ENST00000535038 AKNAQ7Z591 1439 aa8.53□□□□□ -1.04
TNFRSF1A-206ENST00000535038 ATAD2Q6PL18 1390 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 C21orf2O43822 256 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 APBA3O96018 575 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 RASA1P20936 1047 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 HIF1AQ16665 826 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 MICALL1Q8N3F8 863 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 STAG2Q8N3U4 1231 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 GLMNQ92990 594 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 KDM5BQ9UGL1 1544 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 NAIPQ13075 1403 aa8.52□□□□□ -1.05
TNFRSF1A-206ENST00000535038 EPRSP07814 1512 aaKnown RBP8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 SEC13P55735 322 aa8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 COL9A3Q14050 684 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 C8orf86Q6ZUL3 223 aa8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 GAS2L2Q8NHY3 880 aa8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 CHMP7Q8WUX9 453 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 SCG3Q8WXD2 468 aaKnown RBP8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 BHMTQ93088 406 aa8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 C2orf49Q9BVC5 232 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 TFIP11Q9UBB9 837 aaKnown RBP8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 MAFBQ9Y5Q3 323 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 GTF3C3Q9Y5Q9 886 aa8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 UACAQ9BZF9 1416 aa8.51□□□□□ -1.05
TNFRSF1A-206ENST00000535038 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
TNFRSF1A-206ENST00000535038 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
TNFRSF1A-206ENST00000535038 BTLAQ7Z6A9 289 aa8.5□□□□□ -1.05
TNFRSF1A-206ENST00000535038 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF1A-206ENST00000535038 Q8N3U1 123 aa8.5□□□□□ -1.05
TNFRSF1A-206ENST00000535038 NGLY1Q96IV0 654 aa8.5□□□□□ -1.05
TNFRSF1A-206ENST00000535038 SEMA6BQ9H3T3 888 aa8.5□□□□□ -1.05
TNFRSF1A-206ENST00000535038 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
TNFRSF1A-206ENST00000535038 MTUS2Q5JR59 1369 aa8.49□□□□□ -1.05
TNFRSF1A-206ENST00000535038 NID1P14543 1247 aa8.49□□□□□ -1.05
TNFRSF1A-206ENST00000535038 FNBP4Q8N3X1 1017 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF1A-206ENST00000535038 NACC1Q96RE7 527 aa8.49□□□□□ -1.05
TNFRSF1A-206ENST00000535038 KIAA0556O60303 1618 aa8.49□□□□□ -1.05
TNFRSF1A-206ENST00000535038 KIAA0586Q9BVV6 1533 aa8.49□□□□□ -1.05
TNFRSF1A-206ENST00000535038 ZNF608Q9ULD9 1512 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF1A-206ENST00000535038 MIA2Q96PC5 1412 aa8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 ITGAEP38570 1179 aa8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 TBC1D8BQ0IIM8 1120 aa8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 FAM50AQ14320 339 aaKnown RBP8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 LARP1Q6PKG0 1096 aaKnown RBP8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 C20orf204Q6ZNR8 217 aa8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 UBE2OQ9C0C9 1292 aaKnown RBP8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 DENND4BO75064 1496 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
TNFRSF1A-206ENST00000535038 LILRB5O75023 590 aa8.47□□□□□ -1.05
TNFRSF1A-206ENST00000535038 ITGB7P26010 798 aa8.47□□□□□ -1.05
TNFRSF1A-206ENST00000535038 HINFPQ9BQA5 517 aa8.47□□□□□ -1.05
TNFRSF1A-206ENST00000535038 PPP1R15AO75807 674 aaPredicted RBP8.46□□□□□ -1.06
TNFRSF1A-206ENST00000535038 RTN1Q16799 776 aa8.46□□□□□ -1.06
TNFRSF1A-206ENST00000535038 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
TNFRSF1A-206ENST00000535038 IER5Q5VY09 327 aa8.46□□□□□ -1.06
TNFRSF1A-206ENST00000535038 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
TNFRSF1A-206ENST00000535038 EFCC1Q9HA90 598 aa8.46□□□□□ -1.06
TNFRSF1A-206ENST00000535038 GRIN2AQ12879 1464 aa8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 CDK13Q14004 1512 aaKnown RBP8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 GRIK4Q16099 956 aa8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 RSPO4Q2I0M5 234 aaPredicted RBP8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 CRTC2Q53ET0 693 aaPredicted RBP8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 PNMA5Q96PV4 448 aa8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 SIN3AQ96ST3 1273 aa8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 TPSG1Q9NRR2 321 aa8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 SLC6A14Q9UN76 642 aa8.45□□□□□ -1.06
TNFRSF1A-206ENST00000535038 KDM6BO15054 1643 aa8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 TGFBR3LH3BV60 316 aa8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 DPYDQ12882 1025 aa8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 PTK7Q13308 1070 aa8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 CALR3Q96L12 384 aaKnown RBP8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 PPP1R12CQ9BZL4 782 aa8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 JPH1Q9HDC5 661 aaPredicted RBP8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 NUP153P49790 1475 aaKnown RBP8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 MAGI1Q96QZ7 1491 aaPredicted RBP8.44□□□□□ -1.06
TNFRSF1A-206ENST00000535038 DNMT1P26358 1616 aaKnown RBP8.43□□□□□ -1.06
TNFRSF1A-206ENST00000535038 RAPGEF6Q8TEU7 1601 aa8.43□□□□□ -1.06
TNFRSF1A-206ENST00000535038 ADCY10Q96PN6 1610 aa8.43□□□□□ -1.06
TNFRSF1A-206ENST00000535038 LGR5O75473 907 aa8.43□□□□□ -1.06
TNFRSF1A-206ENST00000535038 GSX2Q9BZM3 304 aa8.43□□□□□ -1.06
TNFRSF1A-206ENST00000535038 FAM196BA6NMK8 535 aa8.42□□□□□ -1.06
TNFRSF1A-206ENST00000535038 USP17L15C9J2P7 530 aa8.42□□□□□ -1.06
TNFRSF1A-206ENST00000535038 USP17L10C9JJH3 530 aa8.42□□□□□ -1.06
TNFRSF1A-206ENST00000535038 USP17L13C9JLJ4 530 aa8.42□□□□□ -1.06
TNFRSF1A-206ENST00000535038 USP17L12C9JPN9 530 aa8.42□□□□□ -1.06
TNFRSF1A-206ENST00000535038 USP17L11C9JVI0 530 aa8.42□□□□□ -1.06
TNFRSF1A-206ENST00000535038 USP17L21D6R901 530 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms