RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 COL4A1P02462 1669 aa16.99■□□□□ 0.31
CMTM1-219ENST00000533953 PTPRCP08575 1304 aa16.98■□□□□ 0.31
CMTM1-219ENST00000533953 ARFGEF1Q9Y6D6 1849 aa16.98■□□□□ 0.31
CMTM1-219ENST00000533953 BBOX1O75936 387 aa16.98■□□□□ 0.31
CMTM1-219ENST00000533953 LMNB1P20700 586 aa16.98■□□□□ 0.31
CMTM1-219ENST00000533953 CTSWP56202 376 aa16.98■□□□□ 0.31
CMTM1-219ENST00000533953 FRAT1Q92837 279 aaPredicted RBP16.98■□□□□ 0.31
CMTM1-219ENST00000533953 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
CMTM1-219ENST00000533953 GREM2Q9H772 168 aa16.98■□□□□ 0.31
CMTM1-219ENST00000533953 ATP6V0A2Q9Y487 856 aa16.98■□□□□ 0.31
CMTM1-219ENST00000533953 DDX60Q8IY21 1712 aaKnown RBP16.97■□□□□ 0.31
CMTM1-219ENST00000533953 ALDH1L1O75891 902 aa16.97■□□□□ 0.31
CMTM1-219ENST00000533953 RPS8P62241 208 aaKnown RBP16.97■□□□□ 0.31
CMTM1-219ENST00000533953 FKBP4Q02790 459 aaKnown RBP eCLIP16.97■□□□□ 0.31
CMTM1-219ENST00000533953 CCDC152Q4G0S7 254 aa16.97■□□□□ 0.31
CMTM1-219ENST00000533953 SOGA3Q5TF21 947 aa16.97■□□□□ 0.31
CMTM1-219ENST00000533953 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
CMTM1-219ENST00000533953 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
CMTM1-219ENST00000533953 GRM8O00222 908 aa16.96■□□□□ 0.31
CMTM1-219ENST00000533953 NBPF7P0C2Y1 421 aaPredicted RBP16.96■□□□□ 0.31
CMTM1-219ENST00000533953 FOXO4P98177 505 aa16.96■□□□□ 0.31
CMTM1-219ENST00000533953 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
CMTM1-219ENST00000533953 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.31
CMTM1-219ENST00000533953 LAMB2P55268 1798 aa16.95■□□□□ 0.3
CMTM1-219ENST00000533953 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
CMTM1-219ENST00000533953 CHD4Q14839 1912 aa16.95■□□□□ 0.3
CMTM1-219ENST00000533953 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
CMTM1-219ENST00000533953 TAF1P21675 1872 aa16.95■□□□□ 0.3
CMTM1-219ENST00000533953 LTBP3Q9NS15 1303 aa16.95■□□□□ 0.3
CMTM1-219ENST00000533953 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
CMTM1-219ENST00000533953 BRPF1P55201 1214 aaPredicted RBP16.94■□□□□ 0.3
CMTM1-219ENST00000533953 GPSM2P81274 684 aa16.94■□□□□ 0.3
CMTM1-219ENST00000533953 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
CMTM1-219ENST00000533953 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
CMTM1-219ENST00000533953 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
CMTM1-219ENST00000533953 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
CMTM1-219ENST00000533953 PLA2G12BQ9BX93 195 aa16.94■□□□□ 0.3
CMTM1-219ENST00000533953 WTIPA6NIX2 430 aaPredicted RBP16.93■□□□□ 0.3
CMTM1-219ENST00000533953 CSF1RP07333 972 aa16.93■□□□□ 0.3
CMTM1-219ENST00000533953 CC2D2BQ6DHV5 1058 aa16.93■□□□□ 0.3
CMTM1-219ENST00000533953 LMBR1LQ6UX01 489 aa16.93■□□□□ 0.3
CMTM1-219ENST00000533953 MPNDQ8N594 471 aa16.93■□□□□ 0.3
CMTM1-219ENST00000533953 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
CMTM1-219ENST00000533953 USP44Q9H0E7 712 aa16.93■□□□□ 0.3
CMTM1-219ENST00000533953 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
CMTM1-219ENST00000533953 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
CMTM1-219ENST00000533953 CACNA1FO60840 1977 aa16.92■□□□□ 0.3
CMTM1-219ENST00000533953 ITGA6P23229 1130 aa16.92■□□□□ 0.3
CMTM1-219ENST00000533953 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
CMTM1-219ENST00000533953 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
CMTM1-219ENST00000533953 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
CMTM1-219ENST00000533953 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
CMTM1-219ENST00000533953 TRIM27P14373 513 aa16.91■□□□□ 0.3
CMTM1-219ENST00000533953 AOC3Q16853 763 aa16.91■□□□□ 0.3
CMTM1-219ENST00000533953 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
CMTM1-219ENST00000533953 PSMD1Q99460 953 aa16.91■□□□□ 0.3
CMTM1-219ENST00000533953 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
CMTM1-219ENST00000533953 NMRK2Q9NPI5 230 aa16.91■□□□□ 0.3
CMTM1-219ENST00000533953 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
CMTM1-219ENST00000533953 UTYO14607 1347 aa16.9■□□□□ 0.3
CMTM1-219ENST00000533953 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
CMTM1-219ENST00000533953 FER1L6Q2WGJ9 1857 aa16.89■□□□□ 0.29
CMTM1-219ENST00000533953 C6orf229H3BNL8 230 aa16.89■□□□□ 0.29
CMTM1-219ENST00000533953 RIMBP2O15034 1052 aa16.89■□□□□ 0.29
CMTM1-219ENST00000533953 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
CMTM1-219ENST00000533953 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
CMTM1-219ENST00000533953 ATF7IPQ6VMQ6 1270 aa16.89■□□□□ 0.29
CMTM1-219ENST00000533953 LARGE2Q8N3Y3 721 aa16.89■□□□□ 0.29
CMTM1-219ENST00000533953 ARHGAP45Q92619 1136 aa16.89■□□□□ 0.29
CMTM1-219ENST00000533953 CDC5LQ99459 802 aaKnown RBP16.89■□□□□ 0.29
CMTM1-219ENST00000533953 BICC1Q9H694 974 aaKnown RBP16.89■□□□□ 0.29
CMTM1-219ENST00000533953 SBF1O95248 1867 aa16.88■□□□□ 0.29
CMTM1-219ENST00000533953 COL4A5P29400 1685 aa16.88■□□□□ 0.29
CMTM1-219ENST00000533953 IPO8O15397 1037 aaKnown RBP16.88■□□□□ 0.29
CMTM1-219ENST00000533953 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
CMTM1-219ENST00000533953 TMC4Q7Z404 712 aa16.88■□□□□ 0.29
CMTM1-219ENST00000533953 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
CMTM1-219ENST00000533953 RTFDC1Q9BY42 306 aaPredicted RBP16.88■□□□□ 0.29
CMTM1-219ENST00000533953 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
CMTM1-219ENST00000533953 MINPP1Q9UNW1 487 aa16.88■□□□□ 0.29
CMTM1-219ENST00000533953 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
CMTM1-219ENST00000533953 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
CMTM1-219ENST00000533953 GLTPD2A6NH11 291 aa16.87■□□□□ 0.29
CMTM1-219ENST00000533953 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
CMTM1-219ENST00000533953 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
CMTM1-219ENST00000533953 MEIS3Q99687 375 aa16.87■□□□□ 0.29
CMTM1-219ENST00000533953 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
CMTM1-219ENST00000533953 RTL9Q8NET4 1388 aa16.87■□□□□ 0.29
CMTM1-219ENST00000533953 SNAP23O00161 211 aa16.86■□□□□ 0.29
CMTM1-219ENST00000533953 RLBP1P12271 317 aa16.86■□□□□ 0.29
CMTM1-219ENST00000533953 IGHMBP2P38935 993 aaKnown RBP16.86■□□□□ 0.29
CMTM1-219ENST00000533953 IFIT5Q13325 482 aaKnown RBP16.86■□□□□ 0.29
CMTM1-219ENST00000533953 GRIPAP1Q4V328 841 aa16.86■□□□□ 0.29
CMTM1-219ENST00000533953 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
CMTM1-219ENST00000533953 TMEM57Q8N5G2 664 aa16.86■□□□□ 0.29
CMTM1-219ENST00000533953 HELBQ8NG08 1087 aaPredicted RBP16.86■□□□□ 0.29
CMTM1-219ENST00000533953 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
CMTM1-219ENST00000533953 KIF3CO14782 793 aa16.85■□□□□ 0.29
CMTM1-219ENST00000533953 PLIN1O60240 522 aa16.85■□□□□ 0.29
CMTM1-219ENST00000533953 UFL1O94874 794 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms