RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 FMN2Q9NZ56 1722 aa7.66□□□□□ -1.18
CHKA-208ENST00000533910 ATP5J2-PTCD1G3V325 749 aa7.65□□□□□ -1.18
CHKA-208ENST00000533910 NPHP4O75161 1426 aaPredicted RBP7.65□□□□□ -1.18
CHKA-208ENST00000533910 SAFB2Q14151 953 aaKnown RBP eCLIP7.65□□□□□ -1.18
CHKA-208ENST00000533910 SHPRHQ149N8 1683 aa7.65□□□□□ -1.18
CHKA-208ENST00000533910 CC2D1BQ5T0F9 858 aaKnown RBP7.65□□□□□ -1.18
CHKA-208ENST00000533910 GAS2L2Q8NHY3 880 aa7.65□□□□□ -1.18
CHKA-208ENST00000533910 MRGPRX2Q96LB1 330 aa7.65□□□□□ -1.18
CHKA-208ENST00000533910 BLMP54132 1417 aaPredicted RBP7.64□□□□□ -1.19
CHKA-208ENST00000533910 DKK1O94907 266 aa7.64□□□□□ -1.19
CHKA-208ENST00000533910 WNT7BP56706 349 aa7.64□□□□□ -1.19
CHKA-208ENST00000533910 MCCD1P59942 119 aaPredicted RBP7.64□□□□□ -1.19
CHKA-208ENST00000533910 WAPLQ7Z5K2 1190 aa7.64□□□□□ -1.19
CHKA-208ENST00000533910 BPHLQ86WA6 291 aaPredicted RBP7.64□□□□□ -1.19
CHKA-208ENST00000533910 PNISRQ8TF01 805 aaKnown RBP7.64□□□□□ -1.19
CHKA-208ENST00000533910 SLC12A5Q9H2X9 1139 aa7.64□□□□□ -1.19
CHKA-208ENST00000533910 DNAAF2Q9NVR5 837 aaKnown RBP7.64□□□□□ -1.19
CHKA-208ENST00000533910 CPSF1Q10570 1443 aaKnown RBP7.63□□□□□ -1.19
CHKA-208ENST00000533910 PPIP5K1Q6PFW1 1433 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 SFI1A8K8P3 1242 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 WASLO00401 505 aaPredicted RBP7.63□□□□□ -1.19
CHKA-208ENST00000533910 SSFA2P28290 1259 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 PPP2R1AP30153 589 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 MAP7D1Q3KQU3 841 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 ANKLE2Q86XL3 938 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 TMC1Q8TDI8 760 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 SLC10A4Q96EP9 437 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 PRIMPOLQ96LW4 560 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 SLC26A8Q96RN1 970 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 CDK19Q9BWU1 502 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 NOD1Q9Y239 953 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 PCDHB11Q9Y5F2 797 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 USP54Q70EL1 1684 aa7.63□□□□□ -1.19
CHKA-208ENST00000533910 NKTRP30414 1462 aaKnown RBP7.62□□□□□ -1.19
CHKA-208ENST00000533910 RGPD8O14715 1765 aaPredicted RBP7.62□□□□□ -1.19
CHKA-208ENST00000533910 CGNL1Q0VF96 1302 aa7.62□□□□□ -1.19
CHKA-208ENST00000533910 SMPD1P17405 629 aa7.62□□□□□ -1.19
CHKA-208ENST00000533910 GTF2IP78347 998 aa7.62□□□□□ -1.19
CHKA-208ENST00000533910 SKOR1P84550 965 aa7.62□□□□□ -1.19
CHKA-208ENST00000533910 EDC4Q6P2E9 1401 aaKnown RBP7.61□□□□□ -1.19
CHKA-208ENST00000533910 ANKARQ7Z5J8 1434 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 ZBED9Q6R2W3 1325 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 PRMT3O60678 531 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 STAU1O95793 577 aaKnown RBP7.61□□□□□ -1.19
CHKA-208ENST00000533910 CNGB1Q14028 1251 aaPredicted RBP7.61□□□□□ -1.19
CHKA-208ENST00000533910 RC3H1Q5TC82 1133 aaKnown RBP7.61□□□□□ -1.19
CHKA-208ENST00000533910 C1QTNF2Q9BXJ5 285 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 TERF2IPQ9NYB0 399 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 GMPR2Q9P2T1 348 aaKnown RBP7.61□□□□□ -1.19
CHKA-208ENST00000533910 DACH1Q9UI36 760 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 AMOTL2Q9Y2J4 779 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 PCDHGA11Q9Y5H2 935 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 LMTK3Q96Q04 1460 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 ADGRL3Q9HAR2 1447 aa7.61□□□□□ -1.19
CHKA-208ENST00000533910 POLR3AO14802 1390 aaPredicted RBP7.6□□□□□ -1.19
CHKA-208ENST00000533910 PRR36Q9H6K5 1346 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 ATP2B4P23634 1241 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 SERPINB4P48594 390 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 HNRNPUQ00839 825 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHKA-208ENST00000533910 PSME1Q06323 249 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 CCDC102BQ68D86 513 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 SND1Q7KZF4 910 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHKA-208ENST00000533910 FAM9BQ8IZU0 186 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 TPCN2Q8NHX9 752 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 CLP1Q92989 425 aaKnown RBP7.6□□□□□ -1.19
CHKA-208ENST00000533910 LRRC7Q96NW7 1537 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 STRCP1A6NGW2 1772 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 STRCQ7RTU9 1775 aa7.6□□□□□ -1.19
CHKA-208ENST00000533910 COL3A1P02461 1466 aaPredicted RBP7.6□□□□□ -1.19
CHKA-208ENST00000533910 ESPNB1AK53 854 aa7.59□□□□□ -1.19
CHKA-208ENST00000533910 J3QL48 77 aa7.59□□□□□ -1.19
CHKA-208ENST00000533910 LZTS3O60299 673 aaPredicted RBP7.59□□□□□ -1.19
CHKA-208ENST00000533910 KCNA6P17658 529 aa7.59□□□□□ -1.19
CHKA-208ENST00000533910 SCTRP47872 440 aa7.59□□□□□ -1.19
CHKA-208ENST00000533910 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.19
CHKA-208ENST00000533910 CCDC27Q2M243 656 aa7.59□□□□□ -1.19
CHKA-208ENST00000533910 TREML4Q6UXN2 200 aa7.59□□□□□ -1.19
CHKA-208ENST00000533910 HDGFL2Q7Z4V5 671 aaPredicted RBP7.59□□□□□ -1.19
CHKA-208ENST00000533910 TRIM50Q86XT4 487 aa7.59□□□□□ -1.19
CHKA-208ENST00000533910 NUDT16Q96DE0 195 aaKnown RBP7.59□□□□□ -1.19
CHKA-208ENST00000533910 GNEQ9Y223 722 aaKnown RBP7.59□□□□□ -1.19
CHKA-208ENST00000533910 SMG6Q86US8 1419 aaKnown RBP7.59□□□□□ -1.19
CHKA-208ENST00000533910 MARF1Q9Y4F3 1742 aaKnown RBP7.58□□□□□ -1.2
CHKA-208ENST00000533910 ARID5BQ14865 1188 aa7.58□□□□□ -1.2
CHKA-208ENST00000533910 LARGE2Q8N3Y3 721 aa7.58□□□□□ -1.2
CHKA-208ENST00000533910 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
CHKA-208ENST00000533910 SENP2Q9HC62 589 aa7.58□□□□□ -1.2
CHKA-208ENST00000533910 CABP1Q9NZU7 370 aa7.58□□□□□ -1.2
CHKA-208ENST00000533910 SSH2Q76I76 1423 aa7.58□□□□□ -1.2
CHKA-208ENST00000533910 PIK3C2AO00443 1686 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 ERVH48-1M5A8F1 160 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 ATP1A2P50993 1020 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 B4GALNT3Q6L9W6 998 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 CAPN12Q6ZSI9 719 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 MORC1Q86VD1 984 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 SIX5Q8N196 739 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 ATP13A2Q9NQ11 1180 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 ANO2Q9NQ90 1003 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 TMPRSS4Q9NRS4 437 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 USP6P35125 1406 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms