RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
CASP4-212ENST00000533730 NRAPQ86VF7 1730 aa10.38□□□□□ -0.75
CASP4-212ENST00000533730 LMO7Q8WWI1 1683 aa10.38□□□□□ -0.75
CASP4-212ENST00000533730 UNCXA6NJT0 531 aa10.37□□□□□ -0.75
CASP4-212ENST00000533730 EVA1CP58658 441 aa10.37□□□□□ -0.75
CASP4-212ENST00000533730 SKOR1P84550 965 aa10.37□□□□□ -0.75
CASP4-212ENST00000533730 ZMIZ1Q9ULJ6 1067 aa10.37□□□□□ -0.75
CASP4-212ENST00000533730 CD2BP2O95400 341 aaKnown RBP10.36□□□□□ -0.75
CASP4-212ENST00000533730 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
CASP4-212ENST00000533730 ZNF598Q86UK7 904 aaKnown RBP10.36□□□□□ -0.75
CASP4-212ENST00000533730 PNMA1Q8ND90 353 aa10.36□□□□□ -0.75
CASP4-212ENST00000533730 STK32AQ8WU08 396 aa10.36□□□□□ -0.75
CASP4-212ENST00000533730 BAP1Q92560 729 aa10.36□□□□□ -0.75
CASP4-212ENST00000533730 CAMTA1Q9Y6Y1 1673 aa10.36□□□□□ -0.75
CASP4-212ENST00000533730 RTL1A6NKG5 1358 aa10.36□□□□□ -0.75
CASP4-212ENST00000533730 KIF24Q5T7B8 1368 aa10.36□□□□□ -0.75
CASP4-212ENST00000533730 BLMP54132 1417 aaPredicted RBP10.35□□□□□ -0.75
CASP4-212ENST00000533730 STRN4Q9NRL3 753 aa10.35□□□□□ -0.75
CASP4-212ENST00000533730 FKBPLQ9UIM3 349 aa10.35□□□□□ -0.75
CASP4-212ENST00000533730 COL5A2P05997 1499 aaPredicted RBP10.35□□□□□ -0.75
CASP4-212ENST00000533730 SPATA31A5Q5VU36 1347 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 SPATA31A7Q8IWB4 1347 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 COL18A1P39060 1754 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 ANKRD26Q9UPS8 1709 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 PIK3CDO00329 1044 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 WNT7BP56706 349 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 SH3BP2P78314 561 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 ELOAQ14241 798 aaKnown RBP10.34□□□□□ -0.75
CASP4-212ENST00000533730 ILDR2Q71H61 639 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 IP6K1Q92551 441 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 NPC1L1Q9UHC9 1359 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 LTN1O94822 1766 aa10.34□□□□□ -0.75
CASP4-212ENST00000533730 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
CASP4-212ENST00000533730 WDR17Q8IZU2 1322 aa10.33□□□□□ -0.76
CASP4-212ENST00000533730 AMPHP49418 695 aa10.33□□□□□ -0.76
CASP4-212ENST00000533730 ZNF511Q8NB15 262 aa10.33□□□□□ -0.76
CASP4-212ENST00000533730 ARMC2Q8NEN0 867 aa10.33□□□□□ -0.76
CASP4-212ENST00000533730 NOVA2Q9UNW9 492 aaKnown RBP10.33□□□□□ -0.76
CASP4-212ENST00000533730 THRAP3Q9Y2W1 955 aaKnown RBP10.33□□□□□ -0.76
CASP4-212ENST00000533730 GLI3P10071 1580 aa10.33□□□□□ -0.76
CASP4-212ENST00000533730 CRB1P82279 1406 aa10.33□□□□□ -0.76
CASP4-212ENST00000533730 SPATA31A1Q5TZJ5 1347 aa10.33□□□□□ -0.76
CASP4-212ENST00000533730 NR1H3Q13133 447 aa10.32□□□□□ -0.76
CASP4-212ENST00000533730 LINC01559Q495D7 138 aa10.32□□□□□ -0.76
CASP4-212ENST00000533730 ZNF697Q5TEC3 545 aa10.32□□□□□ -0.76
CASP4-212ENST00000533730 PHLDB3Q6NSJ2 640 aa10.32□□□□□ -0.76
CASP4-212ENST00000533730 MORC1Q86VD1 984 aa10.32□□□□□ -0.76
CASP4-212ENST00000533730 GPKOWQ92917 476 aaPredicted RBP eCLIP10.32□□□□□ -0.76
CASP4-212ENST00000533730 RGS12O14924 1447 aa10.32□□□□□ -0.76
CASP4-212ENST00000533730 ZC3H4Q9UPT8 1303 aaKnown RBP10.32□□□□□ -0.76
CASP4-212ENST00000533730 FLT4P35916 1363 aa10.31□□□□□ -0.76
CASP4-212ENST00000533730 HOXC9P31274 260 aa10.31□□□□□ -0.76
CASP4-212ENST00000533730 LARP1Q6PKG0 1096 aaKnown RBP10.31□□□□□ -0.76
CASP4-212ENST00000533730 TOM1L2Q6ZVM7 507 aa10.31□□□□□ -0.76
CASP4-212ENST00000533730 TCP11L2Q8N4U5 519 aa10.31□□□□□ -0.76
CASP4-212ENST00000533730 SMG6Q86US8 1419 aaKnown RBP10.31□□□□□ -0.76
CASP4-212ENST00000533730 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 RRS1Q15050 365 aaKnown RBP10.3□□□□□ -0.76
CASP4-212ENST00000533730 PDXDC2PQ6P474 469 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 USP17L2Q6R6M4 530 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 TRIM67Q6ZTA4 783 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 SH3BP5LQ7L8J4 393 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 SH3RF1Q7Z6J0 888 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 ANKRD24Q8TF21 1146 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
CASP4-212ENST00000533730 CARD10Q9BWT7 1032 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 PKD2L1Q9P0L9 805 aa10.3□□□□□ -0.76
CASP4-212ENST00000533730 FAM208AQ9UK61 1670 aaKnown RBP10.3□□□□□ -0.76
CASP4-212ENST00000533730 INSRP06213 1382 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 RBM47A0AV96 593 aaKnown RBP10.29□□□□□ -0.76
CASP4-212ENST00000533730 GDF9O60383 454 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 FBXO45P0C2W1 286 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 MYT1Q01538 1121 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 NBPF14Q5TI25 921 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 FOXJ1Q92949 421 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 OCSTAMPQ9BR26 566 aa10.29□□□□□ -0.76
CASP4-212ENST00000533730 WNT7AO00755 349 aa10.28□□□□□ -0.76
CASP4-212ENST00000533730 FBLN1P23142 703 aa10.28□□□□□ -0.76
CASP4-212ENST00000533730 TNNT2P45379 298 aaPredicted RBP10.28□□□□□ -0.76
CASP4-212ENST00000533730 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
CASP4-212ENST00000533730 NLRP2Q9NX02 1062 aa10.28□□□□□ -0.76
CASP4-212ENST00000533730 USP35Q9P2H5 1018 aa10.28□□□□□ -0.76
CASP4-212ENST00000533730 POLKQ9UBT6 870 aa10.28□□□□□ -0.76
CASP4-212ENST00000533730 EMILIN1Q9Y6C2 1016 aa10.28□□□□□ -0.76
CASP4-212ENST00000533730 RGPD5Q99666 1765 aa10.28□□□□□ -0.76
CASP4-212ENST00000533730 THSD7AQ9UPZ6 1657 aa10.28□□□□□ -0.76
CASP4-212ENST00000533730 PPM1GO15355 546 aaPredicted RBP10.27□□□□□ -0.77
CASP4-212ENST00000533730 SKIP12755 728 aa10.27□□□□□ -0.77
CASP4-212ENST00000533730 CC2D1BQ5T0F9 858 aaKnown RBP10.27□□□□□ -0.77
CASP4-212ENST00000533730 NFATC2IPQ8NCF5 419 aa10.27□□□□□ -0.77
CASP4-212ENST00000533730 ZBBXA8MT70 800 aa10.26□□□□□ -0.77
CASP4-212ENST00000533730 USP17L5A8MUK1 530 aa10.26□□□□□ -0.77
CASP4-212ENST00000533730 HSP90AB2PQ58FF8 381 aa10.26□□□□□ -0.77
CASP4-212ENST00000533730 KRT27Q7Z3Y8 459 aa10.26□□□□□ -0.77
CASP4-212ENST00000533730 DEPDC4Q8N2C3 294 aa10.26□□□□□ -0.77
CASP4-212ENST00000533730 LTV1Q96GA3 475 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms