RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 KAT14Q9H8E8 782 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 PRDM10Q9NQV6 1147 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 RBM27Q9P2N5 1060 aaKnown RBP8.03□□□□□ -1.12
CTNND1-236ENST00000533667 DUOX2Q9NRD8 1548 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 NUTM2BA6NNL0 878 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-236ENST00000533667 NUTM2EB1AL46 878 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-236ENST00000533667 CCDC175P0C221 793 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 GSTO1P78417 241 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 NUTM2AQ8IVF1 878 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-236ENST00000533667 MRPS27Q92552 414 aaKnown RBP8.03□□□□□ -1.12
CTNND1-236ENST00000533667 GDPD2Q9HCC8 539 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 FANCAO15360 1455 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 ITSN2Q9NZM3 1697 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 CYLC1P35663 651 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-236ENST00000533667 GNAQP50148 359 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 SPECC1LQ69YQ0 1117 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 USHBP1Q8N6Y0 703 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 CPLX3Q8WVH0 158 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 INTS4Q96HW7 963 aaKnown RBP8.03□□□□□ -1.12
CTNND1-236ENST00000533667 PIK3C2GO75747 1445 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 GNG11P61952 73 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 SMC5Q8IY18 1101 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 MRPL50Q8N5N7 158 aaKnown RBP8.03□□□□□ -1.12
CTNND1-236ENST00000533667 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.03□□□□□ -1.127e-6■□□□□ 8.3
CTNND1-236ENST00000533667 PLVAPQ9BX97 442 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 UBA5Q9GZZ9 404 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 KDM5BQ9UGL1 1544 aa8.03□□□□□ -1.12
CTNND1-236ENST00000533667 STAMBPO95630 424 aa8.02□□□□□ -1.12
CTNND1-236ENST00000533667 HCLS1P14317 486 aaPredicted RBP8.02□□□□□ -1.12
CTNND1-236ENST00000533667 SPECC1Q5M775 1068 aa8.02□□□□□ -1.12
CTNND1-236ENST00000533667 CCDC113Q9H0I3 377 aa8.02□□□□□ -1.12
CTNND1-236ENST00000533667 RAD50Q92878 1312 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 GPATCH8Q9UKJ3 1502 aaKnown RBP8.02□□□□□ -1.13
CTNND1-236ENST00000533667 N4BP3O15049 544 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 UBASH3AP57075 661 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 MCMDC2Q4G0Z9 681 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 ANKRD13DQ6ZTN6 518 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 KRT222Q8N1A0 295 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 ERMNQ8TAM6 284 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 CRNKL1Q9BZJ0 848 aaKnown RBP8.02□□□□□ -1.13
CTNND1-236ENST00000533667 TSPY2A6NKD2 308 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 BIN1O00499 593 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 ZBTB43O43298 467 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 F13A1P00488 732 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 TUBBP07437 444 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 ARID4AP29374 1257 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-236ENST00000533667 WTAPQ15007 396 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 ATL3Q6DD88 541 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 UBE3BQ7Z3V4 1068 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 SKAP1Q86WV1 359 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 MICU3Q86XE3 530 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 RPGRQ92834 1020 aaKnown RBP8.02□□□□□ -1.13
CTNND1-236ENST00000533667 BRF1Q92994 677 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 SLC26A6Q9BXS9 759 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 ZFYVE9O95405 1425 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 IL15P40933 162 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-236ENST00000533667 HLTFQ14527 1009 aaKnown RBP eCLIP8.02□□□□□ -1.135e-6■□□□□ 9.8
CTNND1-236ENST00000533667 NOLC1Q14978 699 aaKnown RBP eCLIP8.02□□□□□ -1.13
CTNND1-236ENST00000533667 CCDC82Q8N4S0 544 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 EXOC1Q9NV70 894 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 ZKSCAN5Q9Y2L8 839 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 UGGT2Q9NYU1 1516 aa8.02□□□□□ -1.13
CTNND1-236ENST00000533667 PRAG1Q86YV5 1406 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 KLF18A0A0U1RQI7 1052 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 PRPHP41219 470 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 ZGPATQ8N5A5 531 aaKnown RBP8.01□□□□□ -1.13
CTNND1-236ENST00000533667 ESR2Q92731 530 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 PCDHB15Q9Y5E8 787 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 RBM8AQ9Y5S9 174 aaKnown RBP8.01□□□□□ -1.13
CTNND1-236ENST00000533667 ACEP12821 1306 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 EXOC5O00471 708 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 POLR3GO15318 223 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-236ENST00000533667 IDEP14735 1019 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 USP37Q86T82 979 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CEP112Q8N8E3 955 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 TRIM47Q96LD4 638 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CTAGE15A4D2H0 777 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 HLA-DOAP06340 250 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CTAGE8P0CG41 777 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CTAGE6Q86UF2 777 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 USP48Q86UV5 1035 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 TEX2Q8IWB9 1127 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CTAGE4Q8IX94 777 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 AKR1B10O60218 316 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CALM1P0DP23 149 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CALM2P0DP24 149 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CALM3P0DP25 149 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 SKILP12757 684 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 RAB3GAP1Q15042 981 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 CCDC152Q4G0S7 254 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 GIMAP6Q6P9H5 292 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 KSR2Q6VAB6 950 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 MEIS3Q99687 375 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 DCTPP1Q9H773 170 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 ARFGAP3Q9NP61 516 aa8.01□□□□□ -1.13
CTNND1-236ENST00000533667 NPHP3Q7Z494 1330 aa8□□□□□ -1.13
CTNND1-236ENST00000533667 HSF2BPO75031 334 aa8□□□□□ -1.13
CTNND1-236ENST00000533667 IVLP07476 585 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms