RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 HOXB4P17483 251 aaPredicted RBP8.91□□□□□ -0.98
SOX6-216ENST00000533658 CHRNA4P43681 627 aa8.91□□□□□ -0.98
SOX6-216ENST00000533658 RAB15P59190 212 aa8.91□□□□□ -0.98
SOX6-216ENST00000533658 NGLY1Q96IV0 654 aa8.91□□□□□ -0.98
SOX6-216ENST00000533658 ORAI2Q96SN7 254 aa8.91□□□□□ -0.98
SOX6-216ENST00000533658 FAM117AQ9C073 453 aa8.91□□□□□ -0.98
SOX6-216ENST00000533658 FKBPLQ9UIM3 349 aa8.91□□□□□ -0.98
SOX6-216ENST00000533658 ERVH48-1M5A8F1 160 aa8.9□□□□□ -0.98
SOX6-216ENST00000533658 GPC1P35052 558 aa8.9□□□□□ -0.98
SOX6-216ENST00000533658 FOXD4L6Q3SYB3 417 aaPredicted RBP8.9□□□□□ -0.98
SOX6-216ENST00000533658 SH3D19Q5HYK7 790 aa8.9□□□□□ -0.98
SOX6-216ENST00000533658 FOXD4L3Q6VB84 417 aaPredicted RBP8.9□□□□□ -0.98
SOX6-216ENST00000533658 LINC00114Q6XXX2 140 aa8.9□□□□□ -0.98
SOX6-216ENST00000533658 OCSTAMPQ9BR26 566 aa8.9□□□□□ -0.98
SOX6-216ENST00000533658 STK26Q9P289 416 aa8.9□□□□□ -0.98
SOX6-216ENST00000533658 GDF2Q9UK05 429 aaPredicted RBP8.9□□□□□ -0.98
SOX6-216ENST00000533658 HFM1A2PYH4 1435 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 ATRNO75882 1429 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 PTCH1Q13635 1447 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 ADGRF5Q8IZF2 1346 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 XPCQ01831 940 aaPredicted RBP8.89□□□□□ -0.99
SOX6-216ENST00000533658 DOC2BQ14184 412 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 NEUROD2Q15784 382 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 EDARADDQ8WWZ3 215 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 NUCKS1Q9H1E3 243 aaKnown RBP8.89□□□□□ -0.99
SOX6-216ENST00000533658 USP21Q9UK80 565 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 MYOM2P54296 1465 aa8.89□□□□□ -0.99
SOX6-216ENST00000533658 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
SOX6-216ENST00000533658 PIK3R2O00459 728 aa8.88□□□□□ -0.99
SOX6-216ENST00000533658 GNB5O14775 395 aa8.88□□□□□ -0.99
SOX6-216ENST00000533658 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
SOX6-216ENST00000533658 TMEM132EQ6IEE7 984 aa8.88□□□□□ -0.99
SOX6-216ENST00000533658 FNBP4Q8N3X1 1017 aaPredicted RBP8.88□□□□□ -0.99
SOX6-216ENST00000533658 KLRG1Q96E93 195 aa8.88□□□□□ -0.99
SOX6-216ENST00000533658 ZFP64Q9NPA5 681 aa8.88□□□□□ -0.99
SOX6-216ENST00000533658 TRPC5Q9UL62 973 aaPredicted RBP8.88□□□□□ -0.99
SOX6-216ENST00000533658 PRAG1Q86YV5 1406 aa8.88□□□□□ -0.99
SOX6-216ENST00000533658 WAPLQ7Z5K2 1190 aa8.87□□□□□ -0.99
SOX6-216ENST00000533658 ADAM32Q8TC27 787 aa8.87□□□□□ -0.99
SOX6-216ENST00000533658 BCL9LQ86UU0 1499 aa8.87□□□□□ -0.99
SOX6-216ENST00000533658 COL22A1Q8NFW1 1626 aaPredicted RBP8.87□□□□□ -0.99
SOX6-216ENST00000533658 PLEKHH1Q9ULM0 1364 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 AMPD1P23109 780 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 PTK2Q05397 1052 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 POU4F2Q12837 409 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 TPRNQ4KMQ1 711 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 GOLGA6L1Q8N7Z2 621 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 MPHOSPH9Q99550 1183 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 CFHR5Q9BXR6 569 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 CYLDQ9NQC7 956 aa8.86□□□□□ -0.99
SOX6-216ENST00000533658 PXDNQ92626 1479 aa8.85□□□□□ -0.99
SOX6-216ENST00000533658 MEN1O00255 615 aa8.85□□□□□ -0.99
SOX6-216ENST00000533658 ARTNQ5T4W7 220 aa8.85□□□□□ -0.99
SOX6-216ENST00000533658 NBPF11Q86T75 865 aa8.85□□□□□ -0.99
SOX6-216ENST00000533658 KIF1BO60333 1816 aa8.84□□□□□ -0.99
SOX6-216ENST00000533658 NBPF10Q6P3W6 841 aaKnown RBP8.84□□□□□ -0.99
SOX6-216ENST00000533658 NBPF15Q8N660 670 aa8.84□□□□□ -0.99
SOX6-216ENST00000533658 CDC42BPGQ6DT37 1551 aa8.83□□□□□ -1
SOX6-216ENST00000533658 ESPNB1AK53 854 aa8.83□□□□□ -1
SOX6-216ENST00000533658 ATP5J2-PTCD1G3V325 749 aa8.83□□□□□ -1
SOX6-216ENST00000533658 THBS1P07996 1170 aa8.83□□□□□ -1
SOX6-216ENST00000533658 SAFB2Q14151 953 aaKnown RBP eCLIP8.83□□□□□ -1
SOX6-216ENST00000533658 ESCO1Q5FWF5 840 aa8.83□□□□□ -1
SOX6-216ENST00000533658 CCDC125Q86Z20 511 aa8.83□□□□□ -1
SOX6-216ENST00000533658 NOP53Q9NZM5 478 aaKnown RBP8.83□□□□□ -1
SOX6-216ENST00000533658 GPSM3Q9Y4H4 160 aa8.83□□□□□ -1
SOX6-216ENST00000533658 CCDC144AA2RUR9 1427 aa8.82□□□□□ -1
SOX6-216ENST00000533658 BLMP54132 1417 aaPredicted RBP8.82□□□□□ -1
SOX6-216ENST00000533658 FOXO3O43524 673 aa8.82□□□□□ -1
SOX6-216ENST00000533658 COBLO75128 1261 aa8.82□□□□□ -1
SOX6-216ENST00000533658 F11P03951 625 aa8.82□□□□□ -1
SOX6-216ENST00000533658 CTDSPL2Q05D32 466 aa8.82□□□□□ -1
SOX6-216ENST00000533658 SLC27A3Q5K4L6 730 aa8.82□□□□□ -1
SOX6-216ENST00000533658 SLCO4C1Q6ZQN7 724 aa8.82□□□□□ -1
SOX6-216ENST00000533658 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
SOX6-216ENST00000533658 PCMTD1Q96MG8 357 aaPredicted RBP8.82□□□□□ -1
SOX6-216ENST00000533658 KRTAP4-9Q9BYQ8 210 aa8.82□□□□□ -1
SOX6-216ENST00000533658 RALGAPBQ86X10 1494 aa8.82□□□□□ -1
SOX6-216ENST00000533658 GLI3P10071 1580 aa8.82□□□□□ -1
SOX6-216ENST00000533658 NPHP3Q7Z494 1330 aa8.81□□□□□ -1
SOX6-216ENST00000533658 PPLO60437 1756 aa8.81□□□□□ -1
SOX6-216ENST00000533658 SPATA31E1Q6ZUB1 1445 aa8.81□□□□□ -1
SOX6-216ENST00000533658 CFAP70Q5T0N1 1121 aa8.81□□□□□ -1
SOX6-216ENST00000533658 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
SOX6-216ENST00000533658 GJD4Q96KN9 370 aaPredicted RBP8.81□□□□□ -1
SOX6-216ENST00000533658 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
SOX6-216ENST00000533658 PHF24Q9UPV7 400 aa8.81□□□□□ -1
SOX6-216ENST00000533658 RPGRIP1LQ68CZ1 1315 aa8.8□□□□□ -1
SOX6-216ENST00000533658 SLIT2O94813 1529 aa8.8□□□□□ -1
SOX6-216ENST00000533658 SPATA31C2B4DYI2 1134 aa8.8□□□□□ -1
SOX6-216ENST00000533658 AP1G2O75843 785 aa8.8□□□□□ -1
SOX6-216ENST00000533658 DGKGP49619 791 aa8.8□□□□□ -1
SOX6-216ENST00000533658 RSPO4Q2I0M5 234 aaPredicted RBP8.8□□□□□ -1
SOX6-216ENST00000533658 WDR44Q5JSH3 913 aa8.8□□□□□ -1
SOX6-216ENST00000533658 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
SOX6-216ENST00000533658 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.8□□□□□ -1
SOX6-216ENST00000533658 LRP5O75197 1615 aa8.8□□□□□ -1
SOX6-216ENST00000533658 A0A1W2PRU2 124 aa8.79□□□□□ -1
SOX6-216ENST00000533658 GATA4P43694 442 aa8.79□□□□□ -1
SOX6-216ENST00000533658 DEFB132Q7Z7B7 95 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms