RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ZNF408Q9H9D4 720 aa15.16■□□□□ 0.02
CMTM1-216ENST00000533078 H7C1D1 291 aa15.15■□□□□ 0.02
CMTM1-216ENST00000533078 C3orf67Q6ZVT6 689 aa15.15■□□□□ 0.02
CMTM1-216ENST00000533078 SAPCD2Q86UD0 394 aa15.15■□□□□ 0.02
CMTM1-216ENST00000533078 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
CMTM1-216ENST00000533078 BABAM1Q9NWV8 329 aa15.15■□□□□ 0.02
CMTM1-216ENST00000533078 AOC2O75106 756 aa15.14■□□□□ 0.01
CMTM1-216ENST00000533078 RAD17O75943 681 aa15.14■□□□□ 0.01
CMTM1-216ENST00000533078 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
CMTM1-216ENST00000533078 KIAA2012Q0VF49 1180 aa15.14■□□□□ 0.01
CMTM1-216ENST00000533078 CDC37L1Q7L3B6 337 aa15.14■□□□□ 0.01
CMTM1-216ENST00000533078 GLIS2Q9BZE0 524 aaPredicted RBP15.14■□□□□ 0.01
CMTM1-216ENST00000533078 TRMT112Q9UI30 125 aaKnown RBP15.14■□□□□ 0.01
CMTM1-216ENST00000533078 SH3TC1Q8TE82 1336 aa15.14■□□□□ 0.01
CMTM1-216ENST00000533078 AIMP1Q12904 312 aaKnown RBP15.13■□□□□ 0.01
CMTM1-216ENST00000533078 GRAPQ13588 217 aa15.13■□□□□ 0.01
CMTM1-216ENST00000533078 GRAPLQ8TC17 118 aaPredicted RBP15.13■□□□□ 0.01
CMTM1-216ENST00000533078 TSKSQ9UJT2 592 aa15.13■□□□□ 0.01
CMTM1-216ENST00000533078 HCLS1P14317 486 aaPredicted RBP15.12■□□□□ 0.01
CMTM1-216ENST00000533078 RIPK4P57078 832 aa15.12■□□□□ 0.01
CMTM1-216ENST00000533078 NOGQ13253 232 aa15.12■□□□□ 0.01
CMTM1-216ENST00000533078 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
CMTM1-216ENST00000533078 CNOT7Q9UIV1 285 aaKnown RBP15.12■□□□□ 0.01
CMTM1-216ENST00000533078 ANKRD36CQ5JPF3 1778 aa15.11■□□□□ 0.01
CMTM1-216ENST00000533078 COPS6Q7L5N1 327 aa15.11■□□□□ 0.01
CMTM1-216ENST00000533078 PGAP2Q9UHJ9 254 aa15.11■□□□□ 0.01
CMTM1-216ENST00000533078 ANXA1P04083 346 aa15.1■□□□□ 0.01
CMTM1-216ENST00000533078 HUNKP57058 714 aa15.1■□□□□ 0.01
CMTM1-216ENST00000533078 TCIRG1Q13488 830 aa15.1■□□□□ 0.01
CMTM1-216ENST00000533078 SLC51AQ86UW1 340 aa15.1■□□□□ 0.01
CMTM1-216ENST00000533078 MICALL2Q8IY33 904 aa15.1■□□□□ 0.01
CMTM1-216ENST00000533078 XAGE3Q8WTP9 111 aa15.1■□□□□ 0.01
CMTM1-216ENST00000533078 NECTIN2Q92692 538 aa15.1■□□□□ 0.01
CMTM1-216ENST00000533078 PDIA6Q15084 440 aa15.09■□□□□ 0.01
CMTM1-216ENST00000533078 WASHC4Q2M389 1173 aa15.09■□□□□ 0.01
CMTM1-216ENST00000533078 PROSER3Q2NL68 480 aa15.09■□□□□ 0.01
CMTM1-216ENST00000533078 TRPM4Q8TD43 1214 aa15.09■□□□□ 0.01
CMTM1-216ENST00000533078 DPF2Q92785 391 aa15.09■□□□□ 0.01
CMTM1-216ENST00000533078 EYA3Q99504 573 aa15.09■□□□□ 0.01
CMTM1-216ENST00000533078 MCOLN1Q9GZU1 580 aa15.09■□□□□ 0.01
CMTM1-216ENST00000533078 LAMB2P55268 1798 aa15.08■□□□□ 0.01
CMTM1-216ENST00000533078 SLC34A2O95436 690 aa15.08■□□□□ 0
CMTM1-216ENST00000533078 RPS12P25398 132 aaKnown RBP15.08■□□□□ 0
CMTM1-216ENST00000533078 RGS19P49795 217 aa15.08■□□□□ 0
CMTM1-216ENST00000533078 DGKZQ13574 1117 aa15.08■□□□□ 0
CMTM1-216ENST00000533078 LRP10Q7Z4F1 713 aa15.08■□□□□ 0
CMTM1-216ENST00000533078 USP48Q86UV5 1035 aa15.08■□□□□ 0
CMTM1-216ENST00000533078 C2orf69Q8N8R5 385 aa15.08■□□□□ 0
CMTM1-216ENST00000533078 DCPSQ96C86 337 aaKnown RBP15.08■□□□□ 0
CMTM1-216ENST00000533078 NSFL1CQ9UNZ2 370 aaKnown RBP15.08■□□□□ 0
CMTM1-216ENST00000533078 CASP8AP2Q9UKL3 1982 aa15.07■□□□□ 0
CMTM1-216ENST00000533078 G3V3G9 751 aa15.07■□□□□ 0
CMTM1-216ENST00000533078 C6orf229H3BNL8 230 aa15.07■□□□□ 0
CMTM1-216ENST00000533078 HIRAP54198 1017 aaPredicted RBP15.07■□□□□ 0
CMTM1-216ENST00000533078 DCAF8Q5TAQ9 597 aa15.07■□□□□ 0
CMTM1-216ENST00000533078 KRT26Q7Z3Y9 468 aa15.07■□□□□ 0
CMTM1-216ENST00000533078 PSMD14O00487 310 aa15.06■□□□□ 0
CMTM1-216ENST00000533078 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
CMTM1-216ENST00000533078 CCDC102AQ96A19 550 aa15.06■□□□□ 0
CMTM1-216ENST00000533078 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
CMTM1-216ENST00000533078 LAS1LQ9Y4W2 734 aaKnown RBP15.06■□□□□ 0
CMTM1-216ENST00000533078 YDJCA8MPS7 323 aa15.05■□□□□ -0
CMTM1-216ENST00000533078 RIMBP2O15034 1052 aa15.05■□□□□ -0
CMTM1-216ENST00000533078 TMPOP42166 694 aaKnown RBP15.05■□□□□ -0
CMTM1-216ENST00000533078 TBC1D10BQ4KMP7 808 aaPredicted RBP15.05■□□□□ -0
CMTM1-216ENST00000533078 HDGFL1Q5TGJ6 251 aa15.05■□□□□ -0
CMTM1-216ENST00000533078 RGMBQ6NW40 437 aa15.05■□□□□ -0
CMTM1-216ENST00000533078 PLBD2Q8NHP8 589 aa15.05■□□□□ -0
CMTM1-216ENST00000533078 DBNDD1Q9H9R9 158 aa15.05■□□□□ -0
CMTM1-216ENST00000533078 GBA2Q9HCG7 927 aaPredicted RBP15.05■□□□□ -0
CMTM1-216ENST00000533078 ZNF157P51786 506 aaPredicted RBP15.04■□□□□ -0
CMTM1-216ENST00000533078 ANKRD13DQ6ZTN6 518 aa15.04■□□□□ -0
CMTM1-216ENST00000533078 SAMD7Q7Z3H4 446 aa15.04■□□□□ -0
CMTM1-216ENST00000533078 SULF1Q8IWU6 871 aa15.04■□□□□ -0
CMTM1-216ENST00000533078 SAGE1Q9NXZ1 904 aa15.04■□□□□ -0
CMTM1-216ENST00000533078 CHPF2Q9P2E5 772 aa15.04■□□□□ -0
CMTM1-216ENST00000533078 DBF4Q9UBU7 674 aaPredicted RBP15.04■□□□□ -0
CMTM1-216ENST00000533078 LRRC37AA6NMS7 1700 aa15.03■□□□□ -0
CMTM1-216ENST00000533078 ECE2O60344 883 aa15.03■□□□□ -0
CMTM1-216ENST00000533078 HOXB7P09629 217 aa15.03■□□□□ -0
CMTM1-216ENST00000533078 RALBP1Q15311 655 aa15.03■□□□□ -0
CMTM1-216ENST00000533078 NEUROD2Q15784 382 aa15.03■□□□□ -0
CMTM1-216ENST00000533078 RBM26Q5T8P6 1007 aaKnown RBP15.03■□□□□ -0
CMTM1-216ENST00000533078 FAM89AQ96GI7 184 aa15.03■□□□□ -0
CMTM1-216ENST00000533078 ZC3H12CQ9C0D7 883 aaKnown RBP15.03■□□□□ -0
CMTM1-216ENST00000533078 DDX60Q8IY21 1712 aaKnown RBP15.03■□□□□ -0
CMTM1-216ENST00000533078 SHTN1A0MZ66 631 aa15.02■□□□□ -0
CMTM1-216ENST00000533078 SF3B3Q15393 1217 aaKnown RBP15.02■□□□□ -0
CMTM1-216ENST00000533078 KIF4BQ2VIQ3 1234 aa15.02■□□□□ -0
CMTM1-216ENST00000533078 CELF1Q92879 486 aaKnown RBP15.02■□□□□ -0
CMTM1-216ENST00000533078 HYPKQ9NX55 129 aa15.02■□□□□ -0
CMTM1-216ENST00000533078 DUOX1Q9NRD9 1551 aa15.02□□□□□ -0.01
CMTM1-216ENST00000533078 TAF1P21675 1872 aa15.01□□□□□ -0.01
CMTM1-216ENST00000533078 ATP5J2-PTCD1G3V325 749 aa15.01□□□□□ -0.01
CMTM1-216ENST00000533078 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
CMTM1-216ENST00000533078 DOK7Q18PE1 504 aa15.01□□□□□ -0.01
CMTM1-216ENST00000533078 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
CMTM1-216ENST00000533078 ZNF428Q96B54 188 aa15.01□□□□□ -0.01
CMTM1-216ENST00000533078 ANKIB1Q9P2G1 1089 aa15.01□□□□□ -0.01
CMTM1-216ENST00000533078 ADM5C9JUS6 153 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms