RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 SYCP1Q15431 976 aa17.4■□□□□ 0.38
LTBP3-221ENST00000532932 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-221ENST00000532932 CCAR1Q8IX12 1150 aaKnown RBP17.4■□□□□ 0.38
LTBP3-221ENST00000532932 KRT222Q8N1A0 295 aa17.4■□□□□ 0.38
LTBP3-221ENST00000532932 KLHDC4Q8TBB5 520 aa17.4■□□□□ 0.38
LTBP3-221ENST00000532932 GABPB1Q06547 395 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-221ENST00000532932 TEFQ10587 303 aa17.4■□□□□ 0.38
LTBP3-221ENST00000532932 ERC1Q8IUD2 1116 aa17.4■□□□□ 0.38
LTBP3-221ENST00000532932 ZNF397Q8NF99 534 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-221ENST00000532932 KCNB2Q92953 911 aa17.4■□□□□ 0.38
LTBP3-221ENST00000532932 NDUFB9Q9Y6M9 179 aa17.4■□□□□ 0.38
LTBP3-221ENST00000532932 ZBTB22O15209 634 aa17.39■□□□□ 0.38
LTBP3-221ENST00000532932 USP42Q9H9J4 1324 aaKnown RBP17.39■□□□□ 0.37
LTBP3-221ENST00000532932 HIP1O00291 1037 aa17.39■□□□□ 0.37
LTBP3-221ENST00000532932 HOXC9P31274 260 aa17.39■□□□□ 0.37
LTBP3-221ENST00000532932 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
LTBP3-221ENST00000532932 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
LTBP3-221ENST00000532932 SLFN14P0C7P3 912 aa17.39■□□□□ 0.37
LTBP3-221ENST00000532932 GUCY1B3Q02153 619 aa17.39■□□□□ 0.37
LTBP3-221ENST00000532932 CCDC73Q6ZRK6 1079 aa17.39■□□□□ 0.37
LTBP3-221ENST00000532932 ST7Q9NRC1 585 aa17.39■□□□□ 0.37
LTBP3-221ENST00000532932 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
LTBP3-221ENST00000532932 SIRT1Q96EB6 747 aa17.38■□□□□ 0.37
LTBP3-221ENST00000532932 FBXO38Q6PIJ6 1188 aa17.38■□□□□ 0.37
LTBP3-221ENST00000532932 MORC2Q9Y6X9 1032 aaPredicted RBP17.38■□□□□ 0.37
LTBP3-221ENST00000532932 KINO60870 393 aaKnown RBP17.37■□□□□ 0.37
LTBP3-221ENST00000532932 IQCB1Q15051 598 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 STX1AQ16623 288 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 Q6ZUG5 572 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 AOPEPQ8N6M6 819 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 BBXQ8WY36 941 aaPredicted RBP17.37■□□□□ 0.37
LTBP3-221ENST00000532932 CFAP45Q9UL16 551 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 PDIA4P13667 645 aaKnown RBP17.37■□□□□ 0.37
LTBP3-221ENST00000532932 RESTQ13127 1097 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 RBM43Q6ZSC3 357 aaKnown RBP17.37■□□□□ 0.37
LTBP3-221ENST00000532932 FMNL2Q96PY5 1086 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 SASH1O94885 1247 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 PROSER3Q2NL68 480 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 CCDC129Q6ZRS4 1044 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 TAOK2Q9UL54 1235 aa17.37■□□□□ 0.37
LTBP3-221ENST00000532932 CHGBP05060 677 aa17.36■□□□□ 0.37
LTBP3-221ENST00000532932 ME1P48163 572 aa17.36■□□□□ 0.37
LTBP3-221ENST00000532932 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
LTBP3-221ENST00000532932 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
LTBP3-221ENST00000532932 TERF2Q15554 542 aa17.36■□□□□ 0.37
LTBP3-221ENST00000532932 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
LTBP3-221ENST00000532932 SUCLG2Q96I99 432 aa17.36■□□□□ 0.37
LTBP3-221ENST00000532932 NEK1Q96PY6 1258 aa17.36■□□□□ 0.37
LTBP3-221ENST00000532932 ZRSR1Q15695 479 aaKnown RBP17.35■□□□□ 0.37
LTBP3-221ENST00000532932 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
LTBP3-221ENST00000532932 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
LTBP3-221ENST00000532932 ADCY9O60503 1353 aa17.35■□□□□ 0.37
LTBP3-221ENST00000532932 SMC2O95347 1197 aa17.35■□□□□ 0.37
LTBP3-221ENST00000532932 CCT2P78371 535 aaKnown RBP17.35■□□□□ 0.37
LTBP3-221ENST00000532932 THEMISQ8N1K5 641 aaPredicted RBP17.35■□□□□ 0.37
LTBP3-221ENST00000532932 GOLPH3LQ9H4A5 285 aa17.35■□□□□ 0.37
LTBP3-221ENST00000532932 AGLP35573 1532 aa17.35■□□□□ 0.37
LTBP3-221ENST00000532932 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
LTBP3-221ENST00000532932 SLU7O95391 586 aaKnown RBP17.34■□□□□ 0.37
LTBP3-221ENST00000532932 CCAR2Q8N163 923 aaKnown RBP17.34■□□□□ 0.37
LTBP3-221ENST00000532932 MRFAP1L1Q96HT8 127 aa17.34■□□□□ 0.37
LTBP3-221ENST00000532932 DNAJC2Q99543 621 aaKnown RBP17.34■□□□□ 0.37
LTBP3-221ENST00000532932 SDF4Q9BRK5 362 aa17.34■□□□□ 0.37
LTBP3-221ENST00000532932 NEMFO60524 1076 aa17.34■□□□□ 0.37
LTBP3-221ENST00000532932 CDC25BP30305 580 aa17.34■□□□□ 0.37
LTBP3-221ENST00000532932 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
LTBP3-221ENST00000532932 ERO1AQ96HE7 468 aa17.34■□□□□ 0.37
LTBP3-221ENST00000532932 TMEM2Q9UHN6 1383 aa17.34■□□□□ 0.37
LTBP3-221ENST00000532932 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
LTBP3-221ENST00000532932 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.37
LTBP3-221ENST00000532932 CCZ1BP86790 482 aa17.33■□□□□ 0.37
LTBP3-221ENST00000532932 CCZ1P86791 482 aaPredicted RBP17.33■□□□□ 0.37
LTBP3-221ENST00000532932 ERCC6LQ2NKX8 1250 aa17.33■□□□□ 0.37
LTBP3-221ENST00000532932 CEP57L1Q8IYX8 460 aa17.33■□□□□ 0.37
LTBP3-221ENST00000532932 TRERF1Q96PN7 1200 aa17.33■□□□□ 0.37
LTBP3-221ENST00000532932 SEC62Q99442 399 aaKnown RBP17.33■□□□□ 0.37
LTBP3-221ENST00000532932 ANO10Q9NW15 660 aa17.33■□□□□ 0.37
LTBP3-221ENST00000532932 CAVIN2O95810 425 aa17.33■□□□□ 0.36
LTBP3-221ENST00000532932 SNW1Q13573 536 aaKnown RBP17.33■□□□□ 0.36
LTBP3-221ENST00000532932 TAF3Q5VWG9 929 aa17.33■□□□□ 0.36
LTBP3-221ENST00000532932 DBF4Q9UBU7 674 aaPredicted RBP17.33■□□□□ 0.36
LTBP3-221ENST00000532932 SPATA31D1Q6ZQQ2 1576 aa17.33■□□□□ 0.36
LTBP3-221ENST00000532932 TAF5LO75529 589 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 RBM6P78332 1123 aaKnown RBP17.32■□□□□ 0.36
LTBP3-221ENST00000532932 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
LTBP3-221ENST00000532932 SYT10Q6XYQ8 523 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 NYAP1Q6ZVC0 841 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 USP28Q96RU2 1077 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 ZSCAN16Q9H4T2 348 aaPredicted RBP17.32■□□□□ 0.36
LTBP3-221ENST00000532932 BABAM1Q9NWV8 329 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
LTBP3-221ENST00000532932 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
LTBP3-221ENST00000532932 BIN1O00499 593 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 CDK11BP21127 795 aaKnown RBP17.32■□□□□ 0.36
LTBP3-221ENST00000532932 MTX1Q13505 466 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 TMC6Q7Z403 805 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms