RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 ZNF165P49910 485 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 CKAP2LQ8IYA6 745 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 SMARCC2Q8TAQ2 1214 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 C8orf76Q96K31 380 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 BAG1Q99933 345 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-231ENST00000532463 Q9H521 79 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 SMIM23A6NLE4 172 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 ATP6V1E1P36543 226 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 ZNF131P52739 623 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 PDE3AQ14432 1141 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 NOLC1Q14978 699 aaKnown RBP eCLIP9.22□□□□□ -0.93
CTNND1-231ENST00000532463 AFAP1L1Q8TED9 768 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 PHACTR2O75167 634 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 BAG4O95429 457 aaKnown RBP9.22□□□□□ -0.93
CTNND1-231ENST00000532463 KRT83P78385 493 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 INF2Q27J81 1249 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 PNMA8AQ86V59 439 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-231ENST00000532463 LARSQ9P2J5 1176 aaKnown RBP9.22□□□□□ -0.93
CTNND1-231ENST00000532463 PALM3A6NDB9 673 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-231ENST00000532463 RAP1GDS1P52306 607 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 TNNC1P63316 161 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 PLCB3Q01970 1234 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 ZSCAN29Q8IWY8 852 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-231ENST00000532463 FSIP1Q8NA03 581 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 CARMIL2Q6F5E8 1435 aa9.21□□□□□ -0.93
CTNND1-231ENST00000532463 SPAG1Q07617 926 aa9.21□□□□□ -0.93
CTNND1-231ENST00000532463 CUL5Q93034 780 aa9.21□□□□□ -0.93
CTNND1-231ENST00000532463 KRT86O43790 486 aa9.21□□□□□ -0.93
CTNND1-231ENST00000532463 CASTP20810 708 aaKnown RBP9.21□□□□□ -0.93
CTNND1-231ENST00000532463 TPX2Q9ULW0 747 aaKnown RBP9.21□□□□□ -0.93
CTNND1-231ENST00000532463 GPR161Q8N6U8 529 aaKnown RBP9.21□□□□□ -0.94
CTNND1-231ENST00000532463 PSPC1Q8WXF1 523 aaKnown RBP9.21□□□□□ -0.94
CTNND1-231ENST00000532463 ATP2A3Q93084 1043 aa9.21□□□□□ -0.94
CTNND1-231ENST00000532463 TCP11L1Q9NUJ3 509 aa9.21□□□□□ -0.94
CTNND1-231ENST00000532463 GIMAP4Q9NUV9 329 aa9.21□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC194A0A1B0GVG4 234 aa9.21□□□□□ -0.94
CTNND1-231ENST00000532463 LUC7L3O95232 432 aaKnown RBP9.21□□□□□ -0.94
CTNND1-231ENST00000532463 SKILP12757 684 aa9.21□□□□□ -0.94
CTNND1-231ENST00000532463 ATICP31939 592 aa9.21□□□□□ -0.94
CTNND1-231ENST00000532463 MUM1Q2TAK8 710 aa9.21□□□□□ -0.94
CTNND1-231ENST00000532463 SYCP3Q8IZU3 236 aa9.21□□□□□ -0.94
CTNND1-231ENST00000532463 CCT4P50991 539 aaKnown RBP9.2□□□□□ -0.94
CTNND1-231ENST00000532463 CROCCP2Q86T23 111 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 U3KPZ7 1027 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-231ENST00000532463 GIPC1O14908 333 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 RLBP1P12271 317 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 IDEP14735 1019 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 RASSF2P50749 326 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 RBM5P52756 815 aaKnown RBP eCLIP9.2□□□□□ -0.94
CTNND1-231ENST00000532463 TAOK1Q7L7X3 1001 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 RMND1Q9NWS8 449 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 MKL2Q9ULH7 1088 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 AKNAQ7Z591 1439 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 OPHN1O60890 802 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 CUL4BQ13620 913 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 RASIP1Q5U651 963 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 GAS8O95995 478 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 TRIM60Q495X7 471 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 LRSAM1Q6UWE0 723 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC65Q8IXS2 484 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 TRIM47Q96LD4 638 aa9.2□□□□□ -0.94
CTNND1-231ENST00000532463 UTP14AQ9BVJ6 771 aaKnown RBP9.2□□□□□ -0.94
CTNND1-231ENST00000532463 ZBTB12Q9Y330 459 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-231ENST00000532463 UACAQ9BZF9 1416 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 A0A087WZG4 1122 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 PHEXP78562 749 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 IFT81Q8WYA0 676 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 VGLL3A8MV65 326 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 FKBP4Q02790 459 aaKnown RBP eCLIP9.19□□□□□ -0.94
CTNND1-231ENST00000532463 PPP1R7Q15435 360 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 KLHDC4Q8TBB5 520 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 CABS1Q96KC9 395 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 MX2P20592 715 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 UBASH3AP57075 661 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 CWC27Q6UX04 472 aaKnown RBP9.19□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC25Q86WR0 208 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 GABPB2Q8TAK5 448 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-231ENST00000532463 UBLCP1Q8WVY7 318 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-231ENST00000532463 ZNF622Q969S3 477 aaKnown RBP eCLIP9.19□□□□□ -0.943e-7■□□□□ 10.1
CTNND1-231ENST00000532463 LRRC23Q53EV4 343 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-231ENST00000532463 USP6NLQ92738 828 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 SIL1Q9H173 461 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 PPP1R9AQ9ULJ8 1098 aa9.19□□□□□ -0.94
CTNND1-231ENST00000532463 LRRD1A4D1F6 860 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 BIN1O00499 593 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 PEX19P40855 299 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC102BQ68D86 513 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 AIDAQ96BJ3 306 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 WDR70Q9NW82 654 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 ATP6V0A2Q9Y487 856 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 WDHD1O75717 1129 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-231ENST00000532463 EEF2P13639 858 aaKnown RBP9.18□□□□□ -0.94
CTNND1-231ENST00000532463 TMOD2Q9NZR1 351 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 BAIAP2L1Q9UHR4 511 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 FAM177BA6PVY3 158 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 GOLGA8AA7E2F4 631 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 GOLGA8BA8MQT2 603 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 HIP1RO75146 1068 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 TERF1P54274 439 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 GABPB1Q06547 395 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms