RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 R3HDMLQ9H3Y0 253 aa13.81□□□□□ -0.2
GEN1-205ENST00000532257 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
GEN1-205ENST00000532257 TNIP1Q15025 636 aa13.8□□□□□ -0.2
GEN1-205ENST00000532257 OTOP1Q7RTM1 612 aa13.8□□□□□ -0.2
GEN1-205ENST00000532257 VPS33BQ9H267 617 aa13.8□□□□□ -0.2
GEN1-205ENST00000532257 SIPA1L3O60292 1781 aaPredicted RBP13.79□□□□□ -0.2
GEN1-205ENST00000532257 CDCA5Q96FF9 252 aa13.79□□□□□ -0.2
GEN1-205ENST00000532257 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
GEN1-205ENST00000532257 HOXA10P31260 410 aaPredicted RBP13.78□□□□□ -0.2
GEN1-205ENST00000532257 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
GEN1-205ENST00000532257 ARMC5Q96C12 935 aa13.78□□□□□ -0.2
GEN1-205ENST00000532257 KIF7Q2M1P5 1343 aa13.78□□□□□ -0.2
GEN1-205ENST00000532257 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
GEN1-205ENST00000532257 YDJCA8MPS7 323 aa13.77□□□□□ -0.21
GEN1-205ENST00000532257 ZBTB22O15209 634 aa13.77□□□□□ -0.21
GEN1-205ENST00000532257 TM4SF4P48230 202 aa13.77□□□□□ -0.21
GEN1-205ENST00000532257 ZNF790Q6PG37 636 aa13.77□□□□□ -0.21
GEN1-205ENST00000532257 SULF1Q8IWU6 871 aa13.77□□□□□ -0.21
GEN1-205ENST00000532257 GGA3Q9NZ52 723 aa13.77□□□□□ -0.21
GEN1-205ENST00000532257 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
GEN1-205ENST00000532257 SUPT20HQ8NEM7 779 aa13.76□□□□□ -0.21
GEN1-205ENST00000532257 CFHR5Q9BXR6 569 aa13.76□□□□□ -0.21
GEN1-205ENST00000532257 SPTBN5Q9NRC6 3674 aaKnown RBP13.76□□□□□ -0.21
GEN1-205ENST00000532257 ASTN2O75129 1339 aaPredicted RBP13.75□□□□□ -0.21
GEN1-205ENST00000532257 SOX1O00570 391 aaPredicted RBP13.75□□□□□ -0.21
GEN1-205ENST00000532257 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
GEN1-205ENST00000532257 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
GEN1-205ENST00000532257 MOB2Q70IA6 237 aa13.75□□□□□ -0.21
GEN1-205ENST00000532257 DPF2Q92785 391 aa13.75□□□□□ -0.21
GEN1-205ENST00000532257 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
GEN1-205ENST00000532257 CRAMP1Q96RY5 1269 aa13.75□□□□□ -0.21
GEN1-205ENST00000532257 TMEM106CQ9BVX2 250 aa13.75□□□□□ -0.21
GEN1-205ENST00000532257 RTFDC1Q9BY42 306 aaPredicted RBP13.75□□□□□ -0.21
GEN1-205ENST00000532257 PTPN22Q9Y2R2 807 aa13.75□□□□□ -0.21
GEN1-205ENST00000532257 ZNF609O15014 1411 aa13.74□□□□□ -0.21
GEN1-205ENST00000532257 FKBP1BP68106 108 aa13.74□□□□□ -0.21
GEN1-205ENST00000532257 FMNL2Q96PY5 1086 aa13.74□□□□□ -0.21
GEN1-205ENST00000532257 TMX4Q9H1E5 349 aaPredicted RBP13.74□□□□□ -0.21
GEN1-205ENST00000532257 PRO3102Q9H379 93 aa13.74□□□□□ -0.21
GEN1-205ENST00000532257 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
GEN1-205ENST00000532257 SREBF2Q12772 1141 aa13.73□□□□□ -0.21
GEN1-205ENST00000532257 HLFQ16534 295 aa13.73□□□□□ -0.21
GEN1-205ENST00000532257 CDCA8Q53HL2 280 aa13.73□□□□□ -0.21
GEN1-205ENST00000532257 DPP8Q6V1X1 898 aaPredicted RBP13.73□□□□□ -0.21
GEN1-205ENST00000532257 LRCH3Q96II8 777 aa13.73□□□□□ -0.21
GEN1-205ENST00000532257 NYXQ9GZU5 481 aa13.73□□□□□ -0.21
GEN1-205ENST00000532257 PSMD14O00487 310 aa13.72□□□□□ -0.21
GEN1-205ENST00000532257 RGL2O15211 777 aa13.72□□□□□ -0.21
GEN1-205ENST00000532257 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
GEN1-205ENST00000532257 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
GEN1-205ENST00000532257 ZNF333Q96JL9 665 aa13.72□□□□□ -0.21
GEN1-205ENST00000532257 USP16Q9Y5T5 823 aa13.72□□□□□ -0.21
GEN1-205ENST00000532257 NUP98P52948 1817 aa13.71□□□□□ -0.21
GEN1-205ENST00000532257 DUOX1Q9NRD9 1551 aa13.71□□□□□ -0.21
GEN1-205ENST00000532257 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
GEN1-205ENST00000532257 UBE2Q2LH0YL09 131 aa13.71□□□□□ -0.21
GEN1-205ENST00000532257 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.21
GEN1-205ENST00000532257 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
GEN1-205ENST00000532257 LAMB4A4D0S4 1761 aa13.71□□□□□ -0.22
GEN1-205ENST00000532257 IL13P35225 146 aa13.7□□□□□ -0.22
GEN1-205ENST00000532257 TEFQ10587 303 aa13.7□□□□□ -0.22
GEN1-205ENST00000532257 SLC4A8Q2Y0W8 1093 aa13.7□□□□□ -0.22
GEN1-205ENST00000532257 CD99L2Q8TCZ2 262 aa13.7□□□□□ -0.22
GEN1-205ENST00000532257 DPF3Q92784 378 aa13.69□□□□□ -0.22
GEN1-205ENST00000532257 PRDM6Q9NQX0 595 aa13.69□□□□□ -0.22
GEN1-205ENST00000532257 EYSQ5T1H1 3165 aa13.69□□□□□ -0.22
GEN1-205ENST00000532257 DDX60Q8IY21 1712 aaKnown RBP13.69□□□□□ -0.22
GEN1-205ENST00000532257 ABCC4O15439 1325 aa13.68□□□□□ -0.22
GEN1-205ENST00000532257 KCNQ3O43525 872 aa13.68□□□□□ -0.22
GEN1-205ENST00000532257 HMOX1P09601 288 aa13.68□□□□□ -0.22
GEN1-205ENST00000532257 RPS12P25398 132 aaKnown RBP13.68□□□□□ -0.22
GEN1-205ENST00000532257 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
GEN1-205ENST00000532257 MPNDQ8N594 471 aa13.68□□□□□ -0.22
GEN1-205ENST00000532257 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
GEN1-205ENST00000532257 IBTKQ9P2D0 1353 aaPredicted RBP13.68□□□□□ -0.22
GEN1-205ENST00000532257 NBPF26B4DH59 902 aa13.67□□□□□ -0.22
GEN1-205ENST00000532257 ALDH1A1P00352 501 aa13.67□□□□□ -0.22
GEN1-205ENST00000532257 NBPF10Q6P3W6 841 aaKnown RBP13.67□□□□□ -0.22
GEN1-205ENST00000532257 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
GEN1-205ENST00000532257 STXBP5LQ9Y2K9 1186 aa13.67□□□□□ -0.22
GEN1-205ENST00000532257 LAMB2P55268 1798 aa13.67□□□□□ -0.22
GEN1-205ENST00000532257 UBN2Q6ZU65 1347 aa13.66□□□□□ -0.22
GEN1-205ENST00000532257 A0A1W2PPC1 479 aa13.66□□□□□ -0.22
GEN1-205ENST00000532257 MYCP01106 439 aaPredicted RBP13.66□□□□□ -0.22
GEN1-205ENST00000532257 CAP1Q01518 475 aa13.66□□□□□ -0.22
GEN1-205ENST00000532257 TTLL12Q14166 644 aaPredicted RBP13.66□□□□□ -0.22
GEN1-205ENST00000532257 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.66□□□□□ -0.22
GEN1-205ENST00000532257 DBNDD1Q9H9R9 158 aa13.66□□□□□ -0.22
GEN1-205ENST00000532257 SCAF8Q9UPN6 1271 aaKnown RBP13.66□□□□□ -0.22
GEN1-205ENST00000532257 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
GEN1-205ENST00000532257 SCN9AQ15858 1988 aa13.65□□□□□ -0.22
GEN1-205ENST00000532257 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
GEN1-205ENST00000532257 SLC9C1Q4G0N8 1177 aa13.65□□□□□ -0.22
GEN1-205ENST00000532257 DEFB123Q8N688 67 aa13.65□□□□□ -0.22
GEN1-205ENST00000532257 IL17REQ8NFR9 667 aa13.65□□□□□ -0.22
GEN1-205ENST00000532257 LAMB1P07942 1786 aa13.65□□□□□ -0.22
GEN1-205ENST00000532257 TAF1P21675 1872 aa13.64□□□□□ -0.23
GEN1-205ENST00000532257 WTIPA6NIX2 430 aaPredicted RBP13.64□□□□□ -0.23
GEN1-205ENST00000532257 GPTP24298 496 aa13.64□□□□□ -0.23
GEN1-205ENST00000532257 SCARF1Q14162 830 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms