RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 RNF123Q5XPI4 1314 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 CASP8AP2Q9UKL3 1982 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 MYH3P11055 1940 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 FAM177BA6PVY3 158 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 FOXN1O15353 648 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 NEFLP07196 543 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 EIF2S2P20042 333 aaKnown RBP6.08□□□□□ -1.44
SSBP3-213ENST00000530618 IARSP41252 1262 aaKnown RBP6.08□□□□□ -1.44
SSBP3-213ENST00000530618 SCNN1DP51172 638 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 FMR1Q06787 632 aaKnown RBP eCLIP6.08□□□□□ -1.44
SSBP3-213ENST00000530618 SUSD4Q5VX71 490 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 KIF6Q6ZMV9 814 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 SYNE4Q8N205 404 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 SMC4Q9NTJ3 1288 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 HYPKQ9NX55 129 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 MKRN1Q9UHC7 482 aaKnown RBP6.08□□□□□ -1.44
SSBP3-213ENST00000530618 HDAC5Q9UQL6 1122 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 ZNF652Q9Y2D9 606 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 HTTP42858 3142 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 SPEF2Q9C093 1822 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 BRCA2P51587 3418 aa6.08□□□□□ -1.44
SSBP3-213ENST00000530618 ANXA1P04083 346 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 GPTP24298 496 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 EPHX2P34913 555 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 EXOSC9Q06265 439 aaKnown RBP6.07□□□□□ -1.44
SSBP3-213ENST00000530618 KRT24Q2M2I5 525 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 SLC10A5Q5PT55 438 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 DPY19L2Q6NUT2 758 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 TPTE2Q6XPS3 522 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 GIGYF2Q6Y7W6 1299 aaKnown RBP6.07□□□□□ -1.44
SSBP3-213ENST00000530618 FTSJ3Q8IY81 847 aaKnown RBP6.07□□□□□ -1.44
SSBP3-213ENST00000530618 RTKN2Q8IZC4 609 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 ZBTB3Q9H5J0 574 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 RCAN3Q9UKA8 241 aa6.07□□□□□ -1.44
SSBP3-213ENST00000530618 ABCC4O15439 1325 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 PTPRCP08575 1304 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 CENPFP49454 3210 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 IQCA1LA6NCM1 817 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 RASSF10A6NK89 507 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 ELL2O00472 640 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-213ENST00000530618 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
SSBP3-213ENST00000530618 MYL6BP14649 208 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 ALDH1B1P30837 517 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 VEGFBP49765 207 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 NEXNQ0ZGT2 675 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 HSP90AB3PQ58FF7 597 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 MAP1SQ66K74 1059 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-213ENST00000530618 TRMT2AQ8IZ69 625 aaKnown RBP6.06□□□□□ -1.44
SSBP3-213ENST00000530618 TNS4Q8IZW8 715 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 GPC2Q8N158 579 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 CDCA7LQ96GN5 454 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 CRAMP1Q96RY5 1269 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 RTFDC1Q9BY42 306 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-213ENST00000530618 API5Q9BZZ5 524 aaKnown RBP6.06□□□□□ -1.44
SSBP3-213ENST00000530618 DDX21Q9NR30 783 aaKnown RBP eCLIP6.06□□□□□ -1.44
SSBP3-213ENST00000530618 WBP1LQ9NX94 342 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 HACL1Q9UJ83 578 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 PDE4DIPQ5VU43 2346 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 LAMB1P07942 1786 aa6.06□□□□□ -1.44
SSBP3-213ENST00000530618 NPHP1O15259 732 aa6.05□□□□□ -1.44
SSBP3-213ENST00000530618 VAMP4O75379 141 aa6.05□□□□□ -1.44
SSBP3-213ENST00000530618 SLC4A2P04920 1241 aa6.05□□□□□ -1.44
SSBP3-213ENST00000530618 EPS15P42566 896 aa6.05□□□□□ -1.44
SSBP3-213ENST00000530618 FKBP5Q13451 457 aaPredicted RBP6.05□□□□□ -1.44
SSBP3-213ENST00000530618 CST9Q5W186 159 aa6.05□□□□□ -1.44
SSBP3-213ENST00000530618 NLRP10Q86W26 655 aa6.05□□□□□ -1.44
SSBP3-213ENST00000530618 NYXQ9GZU5 481 aa6.05□□□□□ -1.44
SSBP3-213ENST00000530618 MKI67P46013 3256 aaKnown RBP6.05□□□□□ -1.44
SSBP3-213ENST00000530618 CACNA1FO60840 1977 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 SHTN1A0MZ66 631 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 C19orf67A6NJJ6 358 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 TMEM88BA6NKF7 163 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 YDJCA8MPS7 323 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 TRAF5O00463 557 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 PPEF1O14829 653 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-213ENST00000530618 HSPA8P11142 646 aaKnown RBP6.04□□□□□ -1.44
SSBP3-213ENST00000530618 RARSP54136 660 aaKnown RBP6.04□□□□□ -1.44
SSBP3-213ENST00000530618 HIRAP54198 1017 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-213ENST00000530618 BRPF1P55201 1214 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-213ENST00000530618 ZKSCAN2Q63HK3 967 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 CC2D2BQ6DHV5 1058 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 RIC3Q7Z5B4 369 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 CNTROBQ8N137 903 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 C8orf58Q8NAV2 365 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 ARHGAP45Q92619 1136 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 NECTIN2Q92692 538 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 FRAT1Q92837 279 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-213ENST00000530618 PRDM10Q9NQV6 1147 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 CHPF2Q9P2E5 772 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 ATP6V0A2Q9Y487 856 aa6.04□□□□□ -1.44
SSBP3-213ENST00000530618 AKAP11Q9UKA4 1901 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 ZNF609O15014 1411 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 HCLS1P14317 486 aaPredicted RBP6.03□□□□□ -1.44
SSBP3-213ENST00000530618 CCT4P50991 539 aaKnown RBP6.03□□□□□ -1.44
SSBP3-213ENST00000530618 CXCL9Q07325 125 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 FLIIQ13045 1269 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 AOC3Q16853 763 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 PARP10Q53GL7 1025 aa6.03□□□□□ -1.44
SSBP3-213ENST00000530618 EAPPQ56P03 285 aaPredicted RBP6.03□□□□□ -1.44
SSBP3-213ENST00000530618 TRPM4Q8TD43 1214 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms