RNA–Protein interactions for RNA: ENST00000530170.1

RPS3-215, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-215ENST00000530170 FMNL2Q96PY5 1086 aa11.06□□□□□ -0.64
RPS3-215ENST00000530170 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
RPS3-215ENST00000530170 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.06□□□□□ -0.64
RPS3-215ENST00000530170 PALD1Q9ULE6 856 aa11.06□□□□□ -0.64
RPS3-215ENST00000530170 WDR17Q8IZU2 1322 aa11.06□□□□□ -0.64
RPS3-215ENST00000530170 PCDH11XQ9BZA7 1347 aa11.06□□□□□ -0.64
RPS3-215ENST00000530170 PCDH11YQ9BZA8 1340 aa11.06□□□□□ -0.64
RPS3-215ENST00000530170 NKX1-1Q15270 411 aaPredicted RBP11.05□□□□□ -0.64
RPS3-215ENST00000530170 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
RPS3-215ENST00000530170 DDX60Q8IY21 1712 aaKnown RBP11.05□□□□□ -0.64
RPS3-215ENST00000530170 KAZALD1Q96I82 304 aa11.05□□□□□ -0.64
RPS3-215ENST00000530170 ALDH8A1Q9H2A2 487 aaPredicted RBP11.05□□□□□ -0.64
RPS3-215ENST00000530170 IL1RAPL2Q9NP60 686 aa11.05□□□□□ -0.64
RPS3-215ENST00000530170 ZDHHC9Q9Y397 364 aa11.05□□□□□ -0.64
RPS3-215ENST00000530170 WDR33Q9C0J8 1336 aaKnown RBP11.05□□□□□ -0.64
RPS3-215ENST00000530170 MYH15Q9Y2K3 1946 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 IGKV5-2P06315 115 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 GCKRQ14397 625 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 TSHZ3Q63HK5 1081 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 KIAA1211Q6ZU35 1233 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 ZGPATQ8N5A5 531 aaKnown RBP11.04□□□□□ -0.64
RPS3-215ENST00000530170 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
RPS3-215ENST00000530170 SUCLG2Q96I99 432 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 ZSCAN31Q96LW9 406 aaPredicted RBP11.04□□□□□ -0.64
RPS3-215ENST00000530170 SH2B1Q9NRF2 756 aaPredicted RBP11.04□□□□□ -0.64
RPS3-215ENST00000530170 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 THRAP3Q9Y2W1 955 aaKnown RBP11.04□□□□□ -0.64
RPS3-215ENST00000530170 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
RPS3-215ENST00000530170 ITGB4P16144 1822 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 CCDC171Q6TFL3 1326 aa11.04□□□□□ -0.64
RPS3-215ENST00000530170 CASZ1Q86V15 1759 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 LAMA4Q16363 1823 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 ERVV-2B6SEH9 535 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 CYP27B1O15528 508 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 SLC34A2O95436 690 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 IFIT2P09913 472 aaKnown RBP11.03□□□□□ -0.64
RPS3-215ENST00000530170 POLD1P28340 1107 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 APLP1P51693 650 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 CCDC173Q0VFZ6 552 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 OS9Q13438 667 aaPredicted RBP11.03□□□□□ -0.64
RPS3-215ENST00000530170 VPS53Q5VIR6 699 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 TTC5Q8N0Z6 440 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 PPP1R9BQ96SB3 815 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 BICC1Q9H694 974 aaKnown RBP11.03□□□□□ -0.64
RPS3-215ENST00000530170 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 HMG20BQ9P0W2 317 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.03□□□□□ -0.64
RPS3-215ENST00000530170 SNX14Q9Y5W7 946 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 ARAP2Q8WZ64 1704 aa11.03□□□□□ -0.64
RPS3-215ENST00000530170 G3BP1Q13283 466 aaKnown RBP eCLIP11.02□□□□□ -0.655e-10■□□□□ 8.3
RPS3-215ENST00000530170 DDB1Q16531 1140 aa11.02□□□□□ -0.65
RPS3-215ENST00000530170 TSGA10IPQ3SY00 556 aa11.02□□□□□ -0.65
RPS3-215ENST00000530170 HS1BP3Q53T59 392 aa11.02□□□□□ -0.65
RPS3-215ENST00000530170 PLBD2Q8NHP8 589 aa11.02□□□□□ -0.65
RPS3-215ENST00000530170 ZNF496Q96IT1 587 aaPredicted RBP11.02□□□□□ -0.65
RPS3-215ENST00000530170 IL25Q9H293 177 aa11.02□□□□□ -0.65
RPS3-215ENST00000530170 GPR108Q9NPR9 543 aa11.02□□□□□ -0.65
RPS3-215ENST00000530170 PALLDQ8WX93 1383 aa11.02□□□□□ -0.65
RPS3-215ENST00000530170 ABCC12Q96J65 1359 aa11.02□□□□□ -0.65
RPS3-215ENST00000530170 LAMB2P55268 1798 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 ZBTB7CA1YPR0 619 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 SASH1O94885 1247 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 ANXA1P04083 346 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 YBX3P16989 372 aaKnown RBP eCLIP11.01□□□□□ -0.656e-77■□□□□ 9.7
RPS3-215ENST00000530170 CLCN1P35523 988 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 RFX5P48382 616 aaPredicted RBP11.01□□□□□ -0.65
RPS3-215ENST00000530170 CASP7P55210 303 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 CWF19L2Q2TBE0 894 aaKnown RBP11.01□□□□□ -0.65
RPS3-215ENST00000530170 RIC3Q7Z5B4 369 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 DNAJC5GQ8N7S2 189 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 NLGN2Q8NFZ4 835 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 SYAP1Q96A49 352 aaPredicted RBP11.01□□□□□ -0.65
RPS3-215ENST00000530170 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 LIMCH1Q9UPQ0 1083 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 ATP6V1DQ9Y5K8 247 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 ZNF609O15014 1411 aa11.01□□□□□ -0.65
RPS3-215ENST00000530170 PHF14O94880 888 aa11□□□□□ -0.65
RPS3-215ENST00000530170 ATP5JP18859 108 aa11□□□□□ -0.65
RPS3-215ENST00000530170 PKP1Q13835 747 aa11□□□□□ -0.65
RPS3-215ENST00000530170 NECTIN1Q15223 517 aa11□□□□□ -0.65
RPS3-215ENST00000530170 MCTP1Q6DN14 999 aa11□□□□□ -0.65
RPS3-215ENST00000530170 ANKRD13DQ6ZTN6 518 aa11□□□□□ -0.65
RPS3-215ENST00000530170 AACSQ86V21 672 aa11□□□□□ -0.65
RPS3-215ENST00000530170 MAP4K1Q92918 833 aa11□□□□□ -0.65
RPS3-215ENST00000530170 CARD10Q9BWT7 1032 aa11□□□□□ -0.65
RPS3-215ENST00000530170 GZF1Q9H116 711 aaPredicted RBP11□□□□□ -0.65
RPS3-215ENST00000530170 ATG3Q9NT62 314 aa11□□□□□ -0.65
RPS3-215ENST00000530170 ZKSCAN1P17029 563 aaPredicted RBP10.99□□□□□ -0.65
RPS3-215ENST00000530170 PSMA5P28066 241 aa10.99□□□□□ -0.65
RPS3-215ENST00000530170 ANKRD1Q15327 319 aa10.99□□□□□ -0.65
RPS3-215ENST00000530170 CSPP1Q1MSJ5 1256 aa10.99□□□□□ -0.65
RPS3-215ENST00000530170 ZSCAN23Q3MJ62 389 aa10.99□□□□□ -0.65
RPS3-215ENST00000530170 RNF20Q5VTR2 975 aa10.99□□□□□ -0.65
RPS3-215ENST00000530170 USPL1Q5W0Q7 1092 aa10.99□□□□□ -0.65
RPS3-215ENST00000530170 GAS2L3Q86XJ1 694 aa10.99□□□□□ -0.65
RPS3-215ENST00000530170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.99□□□□□ -0.65
RPS3-215ENST00000530170 EAF2Q96CJ1 260 aaPredicted RBP10.99□□□□□ -0.65
RPS3-215ENST00000530170 ZNF831Q5JPB2 1677 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms